Canis lupus familiaris (dog): 403651
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Entry
403651 CDS
T01007
Symbol
COL1A1
Name
(RefSeq) collagen alpha-1(I) chain precursor
KO
K06236
collagen type I alpha
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04151
PI3K-Akt signaling pathway
cfa04510
Focal adhesion
cfa04512
ECM-receptor interaction
cfa04611
Platelet activation
cfa04820
Cytoskeleton in muscle cells
cfa04926
Relaxin signaling pathway
cfa04933
AGE-RAGE signaling pathway in diabetic complications
cfa04974
Protein digestion and absorption
cfa05146
Amoebiasis
cfa05165
Human papillomavirus infection
cfa05205
Proteoglycans in cancer
cfa05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
403651 (COL1A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
403651 (COL1A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
403651 (COL1A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
403651 (COL1A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
403651 (COL1A1)
09152 Endocrine system
04926 Relaxin signaling pathway
403651 (COL1A1)
09154 Digestive system
04974 Protein digestion and absorption
403651 (COL1A1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
403651 (COL1A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
403651 (COL1A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
403651 (COL1A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
403651 (COL1A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
403651 (COL1A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cfa00536
]
403651 (COL1A1)
Glycosaminoglycan binding proteins [BR:
cfa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
403651 (COL1A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
403651
NCBI-ProteinID:
NP_001003090
Ensembl:
ENSCAFG00000017018
VGNC:
39464
UniProt:
Q9XSJ7
LinkDB
All DBs
Position
9:complement(25576913..25592983)
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AA seq
1460 aa
AA seq
DB search
MFSFVDLRLLLLLAATALLTHGQEEGQEEDIPPVTCVQNGLRYYDRDVWKPEACRICVCD
NGNVLCDDVICDETKNCPGAQVPPGECCPVCPDGEASPTDQETTGVEGPKGDTGPRGPRG
PAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQMSYGYDEKSTGGISVPGPMGPS
GPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGER
GPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPR
GLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGARGSE
GPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPS
GPPGPKGNSGEPGAPGNKGDTGAKGEPGPTGIQGPPGPAGEEGKRGARGEPGPTGLPGPP
GERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSP
GSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPP
GAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVP
GDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAP
GLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGEA
GPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPA
GPTGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKE
GGKGARGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLP
GQRGERGFPGLPGPSGEPGKQGPSGTSGERGPPGPMGPPGLAGPPGESGREGSPGAEGSP
GRDGSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAGPIGPVGAR
GPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPP
GSAGSPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSGGFDFSFLPQP
PQEKAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLKM
CHSDWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPQVAQKNWYISKNPKEKRHV
WYGESMTDGFQFEYGGQGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQTGNL
KKALLLQGSNEIEIRAEGNSRFTYSVTYDGCTSHTGAWGKTVIEYKTTKTSRLPIIDVAP
LDVGAPDQEFGMDIGPVCFL
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctcctgacg
cacggccaagaggagggccaagaagaagacatcccaccagtcacctgcgtacagaacggc
ctcaggtactatgaccgagacgtatggaaacccgaggcctgccggatctgtgtctgcgac
aacggcaacgtgttgtgcgatgacgtgatctgcgacgaaaccaagaactgccccggcgcc
caagtccccccgggcgagtgctgccccgtctgccccgacggcgaggcgtcacctaccgac
caagaaaccacaggagtcgagggacccaaaggagacaccggcccccgaggtccaagggga
cctgccgggccccctggccgagatggcatccccggacagcctggacttcccggaccccct
ggacctcccggaccccctggaccccctggcctcggaggaaactttgctccccaaatgtct
tatggctatgatgagaaatcaactggaggaatctccgtgcctggccccatgggtccttct
ggtcctcgtggtctccctggcccccctggcgcacctggtcctcaaggtttccaaggcccc
cctggtgaacctggcgagcctggagcctcaggtcccatgggtccccgtggtccccctggc
ccccctggcaagaacggagatgacggtgaagctggaaagcctggtcgtcctggtgagcgt
gggcctcctgggcctcagggtgctcggggattgcctggaacagctggccttcctggaatg
aagggacacagaggtttcagtggtttggatggtgccaagggagatgctggtcctgctggt
cccaagggtgagcctggtagccccggtgaaaatggagctcctggccagatgggcccccgt
ggtctgcccggtgaaagaggtcgccctggagcccctggccctgccggtgctcgtggaaac
gatggtgctactggtgctgctgggccccctggtcccactggccccgctggtcctcctggc
ttccccggtgctgttggtgctaagggtgaagctggtccccaaggagcccgtggctctgaa
ggtccccagggcgtgcgtggtgagcccggcccccctggccctgctggtgctgccggccct
gccggaaaccccggtgctgatggacagcctggtgctaaaggtgctaacggcgctcctggc
attgctggtgctcccggcttccccggtgcccgaggcccctctggaccccagggccccagc
ggtcctcctggtcccaagggtaacagcggtgaacctggtgctcccggaaacaaaggagac
actggtgccaagggagagcccggccccactggtattcaaggtccccctggccctgctggg
gaagaaggaaagcgaggagcccgaggtgaacctggacccactggcctgcccggaccccct
ggcgagcgtggtggacctggtagccgtggtttccctggtgcagatggtgtcgctggtccc
aagggtcccgctggtgaacgtggttctcctggtcccgctgggcccaaaggttctcctggt
gaagctggtcgccctggtgaagctggtctgcctggtgccaagggtctgactggaagtcct
ggcagccccggtccagatggcaaaactggcccccctggtcccgctggtcaggatggtcgt
cccggacccccaggcccccctggtgcccgtggtcaagctggtgtgatgggattccctggg
cctaaaggtgccgctggagagcctggcaaggctggagagcgtggtgtccctggcccccct
ggtgctgttggtcctgctggcaaagatggagaagcaggagctcaggggccccctggccct
gctggccccgctggcgagagaggtgaacaaggtcctgctggctcccccggattccagggt
ctccctggccctgctggtcctcccggcgaagcaggcaaacctggtgaacagggtgttcct
ggcgaccttggtgcccccggcccctctggagcaagaggcgagagaggctttcctggtgaa
cgtggtgtgcaaggtccccccggtcctgcaggtccccgaggagccaacggtgcccctggc
aatgatggtgctaagggtgatgctggtgcccctggagccccaggtagccagggcgctcct
ggccttcagggaatgcctggtgaacgaggtgcagctggtcttcctggccctaagggtgac
agaggtgatgccggtcccaaaggtgctgatggttctcctggcaaagatggtgtccgtggt
ctgactggccccattggtcctcctggccctgctggtgcccctggtgacaagggtgaagct
ggtcctagcggccctgctggtcccactggagctcgtggtgcccccggagaccgtggtgag
cctggtccccctggtcctgctggcttcgctgggccccccggtgctgacggccaacctggt
gctaaaggtgaacccggtgatgctggtgctaaaggcgacgctggtccccctggccctgct
ggacccactggacctcccggccccattggtaacgttggtgctcctggacccaaaggtgct
cgtggcagcgccggtccccctggtgctactggtttccctggtgctgctggccgcgtcggt
ccccccggcccctctggaaatgctggaccccctggccctcctggccctgctggcaaagaa
ggcggcaaaggcgcccgtggtgagactggccctgctggacgtcccggtgaagtcggtccc
cctggtccccctggccctgctggcgagaaaggatcccctggtgctgatggacccgctggt
gctcccggcactcccggacctcaaggcattgctggacagcgtggtgtggtcggtctgccc
ggtcaacgaggagaaagaggcttccctggtcttcccggcccctctggcgaacctggcaaa
caaggtccttctggaacaagtggtgaacgtggtccccctggtcccatgggcccccctgga
ttagctggaccccctggcgagtctggacgggagggatctcctggtgctgaaggctcccct
ggacgagatggttctcctggccccaagggtgaccgtggtgagaccggccctgctggaccc
cctggtgcccccggtgcccctggtgctcctggccctgtcggccctgctggcaagaacggt
gaccgcggtgagactggtcctgctggtcctgctggcccaatcggccctgttggtgctcgt
ggtcctgctggaccccaaggcccccgtggtgacaagggtgagacaggcgaacagggtgac
agaggcataaagggtcaccgtggcttctctggtcttcagggtcctcctggccctcccggc
tctcctggtgaacaaggtccttctggagcttctggtcctgctggtccccgaggtccccct
ggctctgctggttctcctggcaaagacggactcaacggtctcccaggccccattggcccc
cccggtcctcgtggtcgcactggtgatgccggtcctgttggtccccctggccctcctgga
ccccctggtccccccggtcctcccagcggcggtttcgacttcagcttcctgccccagcca
cctcaggagaaggctcacgatggcggccgctactaccgggccgatgatgccaacgtggtc
cgtgaccgtgacctcgaggtagacaccaccctcaagagcctgagccagcagatcgagaac
atccggagccctgaaggaagccgcaagaaccctgcccgcacctgccgcgacctcaagatg
tgccactccgactggaagagcggagaatactggattgaccccaaccaaggatgcaacctc
gatgccatcaaggttttctgcaacatggagacaggtgagacctgcgtataccccactcag
ccccaggtggcccagaagaactggtacatcagcaagaaccccaaggagaagagacacgtc
tggtacggcgagagcatgaccgacggattccagttcgagtatggtggccagggctccgat
cctgccgatgtggccatccagctgaccttcctgcgcctgatgtccaccgaggcctcccag
aacatcacctaccactgcaagaacagcgtggcctacatggaccagcagaccggcaacctc
aagaaggccctgctcctccagggttccaacgagatcgagatccgggccgagggcaacagc
cgcttcacctacagtgtcacctacgacggctgcacgagtcacactggagcctggggcaag
acagtgatcgaatacaaaaccaccaagacctcccgtttgcccatcatcgatgtggcacca
ttggacgttggcgccccagaccaggaattcggcatggatattggccctgtctgcttcctg
taa
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