Canis lupus familiaris (dog): 477117
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Entry
477117 CDS
T01007
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
477117 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
477117 (DHX36)
Enzymes [BR:
cfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
477117 (DHX36)
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
477117 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
PhoH
AAA_14
ATPase
DUF6782
AAA_23
RsgA_GTPase
NACHT
Motif
Other DBs
NCBI-GeneID:
477117
NCBI-ProteinID:
XP_022264476
Ensembl:
ENSCAFG00000008673
VGNC:
39946
LinkDB
All DBs
Position
23:complement(48271774..48335495)
Genome browser
AA seq
1002 aa
AA seq
DB search
MSYDYHQSWGRDGGPRSSGGGYGGGHGGSRGPGGGGGGGGGRGGRGRHPGHLKGREIGLW
YAKKQGQKNKEAERQERAVVHMDERREEQIVQLLHSVQAKNDKDSEAQISWFAPEDHGYG
TEIPAENKPNSEKKLENQEKKLISQEKRTFRIRDKYIDRDSEYLLQENEPDVALDQQLLE
DLRKKKSDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILD
DYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGS
ILYCTTGIILQWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMS
ATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQKEQRSQFKRGFMQGH
VNRQEKEEKEAIYKERWPDYVRELRKRYSASTVDVMEMIDDDKVDLNLIAALIRHIVLEE
EDGAILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQVFKKTPPGVRK
IVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRV
QPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSDEA
VSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLS
FKDPFVIPLGKEKIADARRKELAKDTKSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFL
SSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKIIKAVICAGLYPKVAKI
RLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEFHYNWLIYHLKMRTSSIYLYDCTEVS
PYCLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDTLLQEKIESPHP
VDWKDTKSRDCAVLSAIIDLIKTQEKASPRNLPPRIQDGYYS
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgattaccaccagagctggggccgggatggcgggccccgcagctccggcggc
ggctacggaggaggccacggagggagccgaggccccggcggcggaggcggcggcggcggc
ggtcgaggcggccgaggccgacaccccgggcacctgaagggccgcgagatcggcctgtgg
tacgcgaagaagcagggtcagaagaacaaggaagcggagaggcaggagagagctgttgta
cacatggatgaacgtcgagaagaacagattgtgcagctgctacattcagtccaagctaag
aatgataaagattcagaagcacagatctcttggtttgctcccgaagatcatggatatggt
actgaaattcctgcagagaacaaaccaaactcagagaagaagctggagaaccaggaaaag
aaattgataagtcaagaaaagagaacatttagaatcagggacaaatatattgaccgagat
tctgagtatctcttgcaagaaaatgaaccagatgtagccttagaccaacaactattggaa
gacttacgaaagaaaaaaagtgaccttcggtatatagaaatgcagcatttcagggaaaag
ctgccttcatatggaatgcaaaaggaattggtaaatatgattgataaccatcaagtgacc
gtaataagtggtgaaactggttgtggaaaaactactcaagttactcagttcattttggat
gactacattgaaagaggaaaaggatctgcatgcaggatagtttgcacccagccaagaaga
attagtgccatttcagttgcagaaagagtggctgcagaaagggcggaatcgtgtggcaat
ggtaacagtactggataccagattcgtctacaaagccggttgccaaggaagcagggttct
atcttatactgtacaacaggaatcatcctacagtggctccagtcagactcgcatttgtcc
agtgttagtcatattgtgcttgatgaaattcatgagagaaatctgcaatcagatgtttta
atgactgttattaaagatcttctcaattttcgacctgacctgaaagtaatattgatgagt
gcaactttgaatgctgagaaattttcagaatattttggtaactgtccaatgatacacata
cctggttttacctttccggttgtggagtatcttttggaagatataattgaaaaaataaga
tatgttccagaacaaaaagaacaaaggtctcaatttaagagaggtttcatgcaagggcat
gtaaatagacaagaaaaagaagaaaaagaagcaatctataaagaacgctggccagattat
gtaagggaactgcgaaaaagatattctgcaagtactgtagatgttatggaaatgatagat
gatgataaagttgatctgaatttgattgctgcccttatccgacacattgttttggaagaa
gaggatggtgcaatattggtctttctaccaggctgggacaatatcagcactttacatgat
ctcttgatgtcacaagtgatgtttaaatcagacaggtttcttattatacctctacattca
ctgatgcctacagttaaccagacacaggtatttaaaaaaactcctcctggtgttcggaaa
atagtaattgctactaatattgcagagactagcattaccatagatgatgtagtttatgtg
atagatggaggaaaaataaaagaaacacactttgacacacaaaacaacatcagtacaatg
tctgctgagtgggttagtaaagctaatgccaaacaaaggaaaggtcgagctggaagagtt
caacctggtcattgctatcatctgtataatgggcttcgagcaagccttctggatgactat
caactgccagaaattttgagaactcctttagaagaactttgtttacaaataaagatttta
aggctaggtggaattgcttattttctgagtaggttaatggatccaccatcagatgaagca
gtgtcactgtccataaaacacttgatggaactgaatgccttggataaacaagaagaatta
acaccccttggagtccacttagcacgattaccagttgagccacacattggaaaaatgatt
ctttttggagctctgttctgttgtttagacccagtactcaccattgctgctagtctcagc
ttcaaagatccctttgtcattccgttgggcaaagaaaagattgctgatgcaagaagaaaa
gaactggcaaaagacaccaaaagtgaccacctgacagttgtaaatgcatttgagggctgg
gaagaagctaggcgacgtggtttcagatacgaaaaagactattgctgggaatattttttg
tcttcaaatacattgcagatgctgcataacatgaaaggacagtttgctgagcatcttctt
ggagctggatttgtaagcagtagaaatcctaaagatccgaaatctaatataaattcagat
aatgagaagataattaaagcggtcatctgtgctggtttatatcccaaagttgctaaaatc
cgactaaacttgggtaaaaaaagaaaaatggtcaaggtttacacaaaaactgatggacta
gttgctattcatcctaaatctgttaatgtggagcaaacagaatttcactacaactggctt
atctatcatctgaagatgagaacaagtagtatatacttgtatgactgcacagaggtttct
ccatactgtctcttgttctttggaggtgatatttccatccagaaggataacgatcaagaa
actattgctgtagatgaatggattgtctttcagtctccagcaagaattgcccatcttgtt
aaggaattaagaaaggagctagatacccttctgcaagagaagatcgaaagtccgcatcct
gtagattggaaggacactaaatccagagactgtgcagtactgtcagctattatagacttg
atcaaaacacaggaaaaagcaagtcccaggaacttaccaccacgaatccaggatggatat
tacagctga
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integrated database retrieval system
