Canis lupus familiaris (dog): 491145
Help
Entry
491145 CDS
T01007
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
491145 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfa03400
]
491145 (LIG3)
Enzymes [BR:
cfa01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
491145 (LIG3)
DNA repair and recombination proteins [BR:
cfa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
491145 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
Synaptonemal_3
mRNA_cap_enzyme
FAD_binding_1
FMP23
Motif
Other DBs
NCBI-GeneID:
491145
NCBI-ProteinID:
XP_005624869
Ensembl:
ENSCAFG00000018330
VGNC:
42674
UniProt:
A0A8C0NM77
A0A8I3N6S7
LinkDB
All DBs
Position
9:complement(37569261..37590027)
Genome browser
AA seq
991 aa
AA seq
DB search
MTLAFKILFPPTFRALRRKELCLFREPHHWPDIRQFSHWSERGLLHGSCLLQRRKPVLSF
QEGSLRPRATCLVFLPGSHVGLCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRI
GKVVPNPFSESGGDMKEWYHVKCMFEKLERARATTKKIEDLTELEGWEELEDNEKEQISQ
HIADLSSKATGTPKKKAVVQAKLTATGQVTSPVKGASFVTNTNPRKFSGFSAKPNNSGEA
RSSPTPKASLSSSRCDPKHKDCLLREFRKLCAMVAENPSYNTKTQIIQDFLRKGSAGDGF
HGDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETIRVFFE
QSRSFPPAAKSLLTIQEVDKFLLQLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKHD
LKMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLRNEQEVEKEPGQRRALSVQASLMT
PVQPMLAEACKSIEHAMKKCPNGMFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKVA
HFKDYIPQAFPGGHSMILDSEVLLIDTKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIY
FNDVSLMDRPLSERRKFLHDNMVEIPNRIMFSEMKQVTKASDLVDMINRVIREGLEGLVL
KDVKGTYEPGKRHWLKVKKDYLNEGAMADMADLVVLGAFYGQGSKGGMMSIFLMGCYDPS
SQKWCTVTKCSGGHDDATLARLQKELDMVKISKDPSKIPNWLKINKIYYPDFIVPDPKKA
AVWEITGAEFSRSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKEKADFA
VAAGEEGSSTTGGSSSGGENGGVSGPAGASKAKKVGGRPSSPNDRGGHKLIAKPSPVKVG
QKRKAPDEASCPAKVLLDIFTGVRLYLPPSTPDFSRLRRYFVAFDGDLVQEFDMASATHV
LGSGDKNPEAQQVSPEWIWACIRKRRLVAPC
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgactttggctttcaagatcctcttcccaccaaccttccgcgcactcaggcgaaaagaa
ttgtgcctgttccgagagccacatcactggcctgacataagacagttcagccattggtca
gaaagaggtctgcttcatgggtcctgcctcctccagagaagaaagcctgttctgtcattc
caggaaggcagtctaagaccacgtgccacctgccttgtttttttgccagggtcgcatgtg
ggactctgcagtgggccctgtgagatggctgagcaacggttctgtgtggactatgccaag
cgtggcacggctggctgcaaaaaatgcaaagaaaagattgtgaaaggtgtatgccggatt
ggcaaagtggtgcccaatcccttctcagagtccgggggtgatatgaaagagtggtatcac
gttaaatgcatgtttgagaaattggagcgggcccgggccaccacaaaaaaaattgaggac
ctcacagagctggaaggctgggaagagctggaagataatgagaaggaacagataagccag
cacattgcagatctgtcttctaaggcaacaggaacaccaaagaagaaagctgtcgtccag
gctaagctgacagccactggccaggtgacctctccagtgaaaggtgcctcatttgtcacc
aataccaatccccggaaattttctggtttttcagccaagcccaacaactctggggaagcc
cgctcaagccctacccctaaggcaagtttgtcctcaagcagatgtgatcccaagcacaag
gattgtctgctacgtgagtttcggaagctgtgtgccatggtggctgagaatcctagctac
aacacgaagacccagatcatccaggactttcttcggaaaggttcagcaggagatggtttc
cacggtgacgtgtacctaacagtgaagctgctgctgccgggtgttattaagagtgtttac
aacttgaatgataagcagattgtgaagcttttcagccgcatttttaactgcaacccagat
gatatggcacgggacctagagcagggcgacgtgtcagagacaatcagagtcttctttgag
cagagcagatctttccccccagctgccaagagccttcttaccatccaggaagtggacaaa
ttcctccttcagctctccaagctcaccaaggaggatgagcagcaacaggccctgcaggac
atcgcctccaggtgtacagccaatgaccttaagtgcatcatcagattgatcaaacacgat
ctgaagatgaactcgggtgcaaaacacgtgttagatgcccttgaccccaatgcctatgaa
gccttcaaagcctcacgcaacctgcaggatgtggtcgagcgggtcctccgcaacgagcag
gaggtggagaaggagccaggccagagacgagctctgagtgtccaggcttccttgatgacg
ccagtgcagcccatgctggccgaggcctgcaagtccatcgagcatgcgatgaagaagtgt
cctaacggcatgttttccgagatcaagtacgatggggaacgagtccaggtgcataagaac
ggggatcacttcagctacttcagccgcagccttaagcctgtgctgcctcacaaggtggcc
cactttaaggactacatcccccaggctttccctgggggccacagcatgatcttggactcc
gaggtgctcctgatcgacacgaagacaggcaaaccgctgccctttgggactcttggagtg
cacaagaaagctgccttccaggatgctaatgtctgcctttttgtttttgattgtatctac
ttcaatgatgtcagtttgatggataggcctctctctgagcgccggaagtttcttcatgac
aacatggtggaaattcccaaccggatcatgttctcagaaatgaagcaagtcactaaagct
tcagacttggtcgacatgataaaccgggtcatccgagaggggctggaagggctggtgctg
aaggacgtgaagggtacctatgagcctggaaagcggcactggctgaaagtgaagaaagac
tatttgaatgagggggccatggctgatatggcggacctggtggtccttggggccttctat
gggcaagggagcaaaggtggcatgatgtccatcttcctcatgggctgctatgacccaagt
agccagaagtggtgcacggtcaccaagtgttcaggaggccatgatgatgcgacccttgcc
cgcctgcagaaggaactggacatggtaaagatcagcaaggatcccagcaaaatacccaac
tggctgaaaatcaacaagatctactatcctgacttcatagtcccagacccaaagaaagct
gctgtgtgggaaatcacgggggctgagttctccaggtctgaggctcacacggccgatggg
atctccatccgattccctcgttgtacccggatccgtgacgataaggactggaaatctgcc
actaaccttccccagctcaaggaactgtaccagctgtccaaggagaaggcggacttcgct
gtggcggctggagaggagggaagctccaccacagggggcagcagcagcggcggagagaac
gggggtgtctcggggcctgctggggctagcaaggccaagaaggtgggagggaggccgagt
agccccaatgacagaggcggccacaagttgatagccaaaccttcccctgtgaaagtgggg
cagaagcggaaggctcccgatgaggcttcatgcccagcaaaggtgctgctggacatcttc
actggcgtgcggctctacctgccaccctctacgccagacttcagccgtctcagacgctac
tttgtggcattcgatggggacctggtgcaggaatttgacatggcatcagccacacatgtg
ctgggtagcggggacaagaaccctgaggctcagcaggtctccccggagtggatttgggcg
tgtatccggaaacgaaggctggtagctccctgctag
DBGET
integrated database retrieval system
