Canis lupus familiaris (dog): 613006
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Entry
613006 CDS
T01007
Symbol
GTF2A1
Name
(RefSeq) transcription initiation factor IIA subunit 1 isoform X1
KO
K03122
transcription initiation factor TFIIA large subunit
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03022
Basal transcription factors
cfa05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
613006 (GTF2A1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
613006 (GTF2A1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfa03021
]
613006 (GTF2A1)
Transcription machinery [BR:
cfa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIA
613006 (GTF2A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIA
CCD97-like_C
Motif
Other DBs
NCBI-GeneID:
613006
NCBI-ProteinID:
XP_038449128
Ensembl:
ENSCAFG00000017305
VGNC:
41541
LinkDB
All DBs
Position
8:complement(53078908..53125623)
Genome browser
AA seq
376 aa
AA seq
DB search
MANSANTNTVPKLYRSVIEDVINDVRDIFLDDGVDEQVLMELKTLWENKLMQSRAVDGFH
SEEQQLLLQVQQQHQPQQQQHHHHHHHQQTQPQQTVPQQAQTQQVLIPASQQAAAPQVIV
PDSKLIQHMNASNMSAAATAATLALPAGVTPVQQILTNSGQLLQVVRAANGAQYIFQPQQ
SVVLQQQVIPQMQPGGVQAPVIQQVLAPLPGGISPQTGVIIQPQQILFTGNKTQVIPTTV
AAPTPAQAQITATGQQQPQTQPAQPQAPLVLQVDGTGDTSSEEDEDEEEDYDDEEEEDKE
KDGAEDGQVEEEPLNSEDDVSDEEGQELFDTENVVVCQYDKIHRSKNKWKFHLKDGIMNL
NGRDYIFSKAIGDAEW
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactcggcaaatacaaacaccgtgcctaaattatacagatctgtgattgaagat
gttattaatgatgtgagagacatctttttggatgatggagttgatgaacaagttctgatg
gaactaaaaaccttgtgggagaataaactaatgcaatctagggcagtagatggatttcat
tcagaagagcagcagcttttattgcaagttcaacagcagcatcaaccccagcaacagcaa
catcaccaccaccaccaccatcagcaaactcaaccacagcaaacggtacctcagcaagcg
cagactcagcaggtccttattcctgcatcacagcaagctgctgcaccacaagttatagtt
cctgattctaagctgatacaacatatgaacgcatcaaatatgagcgctgctgctacagct
gctaccttggcactccctgcaggtgtgactcctgttcaacagatactaacaaattcaggc
cagcttcttcaagtagtcagagcagccaatggtgcccagtatatctttcagcctcagcag
tcagtggttcttcaacaacaagttataccacaaatgcagcctggtggagtacaggctcct
gttatacaacaggtactggcccctcttcctggagggatttcaccacagacaggtgtcatc
attcagccacagcaaatcttatttacaggaaataagactcaagttatacctacaacagtg
gctgcccctacaccggcacaagcacagataactgcaactggccaacagcagccacagacc
cagcctgctcagccacaggctccgctggtgctacaggttgatggaactggggacacatca
tctgaagaagatgaagatgaagaagaagactatgatgatgaggaagaagaagacaaagag
aaagatggagctgaagatgggcaggtagaagaagagcccctcaacagtgaagatgatgtg
agtgatgaggaaggacaggaactctttgatacagaaaatgttgttgtatgccaatatgat
aagatacacagaagtaaaaacaaatggaaatttcatctcaaggatggtataatgaatctt
aatggaagagattatatattttccaaagccatcggagatgcagaatggtga
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integrated database retrieval system
