Citrobacter farmeri: CI104_04910
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Entry
CI104_04910 CDS
T05012
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
cfar
Citrobacter farmeri
Pathway
cfar00470
D-Amino acid metabolism
cfar00550
Peptidoglycan biosynthesis
cfar01100
Metabolic pathways
cfar01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CI104_04910 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CI104_04910 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CI104_04910 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cfar01011
]
CI104_04910 (ddl)
Enzymes [BR:
cfar01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CI104_04910 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
cfar01011
]
Precursor biosynthesis
Amino acid ligase
CI104_04910 (ddl)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
ATPgrasp_YheCD
TTL
Motif
Other DBs
NCBI-ProteinID:
AST78471
LinkDB
All DBs
Position
973704..974624
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AA seq
306 aa
AA seq
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MADKIAVLLGGTSAERDVSLNSGAAVLAGLREGGVDAHPVDPKEVDVTLLKSMGFQKVFI
ALHGRGGEDGTLQGLLELVGLPYTGSGVMASAISMDKLRSKLLWQGAGLPVAPWVALTRS
QFEKGINKELVTEISALGLPLIVKPSREGSSVGMSKVSEYDALQDALTLAFQHDEEVLIE
KWLSGPEFTVAILGEEILPAIRIQPAGTFYDYEAKYLSDETQYFCPAGLESEEESILQAL
VLKAWTTLGCKGWGRIDVMQDSDGQFYLLEANTSPGMTSHSLVPMAARKAGMSFSQLVVR
ILELAD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaatcgcggtcctgctgggcggtacctctgctgaacgtgatgtgtcactg
aattccggtgcggctgtgctggccggattacgtgaaggcggcgtggatgcgcatccggtc
gatccgaaagaggtcgatgttacattgctgaaatcgatgggctttcagaaagtctttatc
gccctgcatggtcgtggcggggaagatggaaccttacaggggttactggaactggttggc
ttgccttataccggcagcggtgtgatggcatcggcgatctccatggataaactgcgcagc
aagttactgtggcagggggcggggttacccgttgcaccgtgggtcgcgctgacccggtcg
cagtttgaaaaaggcattaacaaagagctggttacggaaatttccgcgctgggtttaccg
ctgattgtgaagcccagccgtgaaggatccagcgtgggaatgtcaaaagtgtcagaatat
gacgctttacaggatgcattaacgttggcttttcagcatgatgaagaagttctaatcgag
aaatggctcagcggtccggaatttacggtagcgatactgggtgaagaaattttacccgca
attcgtatccaacccgcaggaaccttctatgattatgaggcgaagtatctgtctgatgag
acacagtatttctgccctgctggtctggaaagcgaagaagagtctattttgcaggcatta
gtgctgaaagcgtggacaaccctgggctgtaaaggctgggggcgtattgatgttatgcag
gatagcgatggtcagttttatctgctggaagcgaatacctcaccgggtatgaccagccac
agcctggtgccgatggcggcgcgtaaggcggggatgagtttctcgcagttggtggtacga
attctggagttggcggactga
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