Clostridium fermenticellae: D4Z93_12120 Help Entry D4Z93_12120       CDS       T06956                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism cfer  Clostridium fermenticellae Pathway cfer02020   Two-component system cfer02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:cfer00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     D4Z93_12120  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     D4Z93_12120  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cfer03021]     D4Z93_12120 Transcription machinery [BR:cfer03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      D4Z93_12120 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_Crp_2 HTH_21 HTH_38 HTH_13 HTH_IclR MarR Motif Other DBs NCBI-ProteinID:  AYD41217 UniProt:  A0A386H650 LinkDB All DBs Position complement(2633049..2634419) Genome browser AA seq 456 aa AA seqDB search MNLDFSLNLTQEQKLVMTQQMQLSIKLLQMSSFELEQYIEKEVQENPVLDAKDAYDNVKS KNDDIDYKQLIKYLEFDNYSHHNYTRNNEEEVSPFIFISEKKSLKEYLKEQIRDIEENDY IKSICFYLIENINAKGYLDMDDEEIMDEINISRDIENHAVKILQSLEPYGVGARDLKECL RIQVIKKGIDDTNIFIIIDKYLELIAENKYNIIAKELKIDVKEAQKYGDTIKSLEPKPSR GFYTGEETKYIIPDAYIKKIDDKYYIIMNDDLLPKLSINNMYKDIINEDQDKNAVDYVKE KLNSAIFLIKSIQHRKSTIYRVLEKILEIQRDYFDYGEKHLKPMTLKNIADSLEMHESTI SRAIRDKYIYTNSGTIRIKDLFTLGISSTINGEDVSVNLIKRYIQDLIDNEDRKKPLSDQ RICDILIQKNMNISRRTVAKYREELGIKSSKGRKRF NT seq 1371 nt NT seq  +upstreamnt  +downstreamnt gtgaatttagattttagtctaaacttaacacaggaacaaaaactggttatgacacagcag atgcaattatctataaaattgctccaaatgtcaagttttgaacttgaacaatatattgaa aaagaggttcaggagaatcctgtgcttgatgcaaaagatgcttatgataatgtgaaatca aaaaatgatgatattgattataagcaattaattaaatatttagaatttgataactatagt caccacaattatacaaggaataatgaagaagaagtatcaccgtttatatttatttctgag aaaaagtcattgaaggaatatctaaaagaacagataagagacatagaagaaaacgattat ataaagtcaatttgtttttatcttattgaaaatataaatgctaaagggtatcttgatatg gatgatgaggagattatggacgagataaatatatcaagggatattgagaatcatgctgtt aagattctgcaaagtcttgaaccatatggcgtgggagcgagagaccttaaggagtgtctg agaatacaagtgataaaaaaaggaatagatgatactaatatttttattataatagataaa tatctggaacttatagctgaaaataaatataatattatagctaaggaacttaaaatagat gttaaagaagcacaaaagtacggggatacaataaagtcacttgaaccaaagccgtctaga ggcttttatacaggtgaagaaacaaagtatataattcccgatgcatatataaagaaaata gatgacaaatattatataattatgaatgatgatttgctgccaaagcttagtataaataat atgtataaagatataataaatgaagatcaagacaaaaatgcagttgattatgtaaaggag aagcttaatagtgcaatatttttgattaaaagtatacaacacagaaaaagtacaatctat agggttctggagaaaatacttgagattcagagagattattttgattatggggaaaagcat ttaaaacccatgaccttaaaaaatatagcagatagtttggaaatgcatgaatcaacaata agcagagctattagggataagtatatatatacaaattcgggaactataagaatcaaagat ctttttacactgggtatatcatcaactattaatggagaagatgtatctgtaaatttaatt aaaagatacatacaggatttgattgacaatgaggatagaaaaaagccattatctgatcag agaatatgtgatatactaattcaaaaaaatatgaatatttctaggagaactgtggcaaaa tacagagaggaattaggaataaagtcatctaaagggagaaagagattttag

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