Corynebacterium freiburgense: CFREI_05915
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Entry
CFREI_05915 CDS
T09215
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
cfg
Corynebacterium freiburgense
Pathway
cfg00470
D-Amino acid metabolism
cfg00550
Peptidoglycan biosynthesis
cfg01100
Metabolic pathways
cfg01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cfg00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CFREI_05915 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CFREI_05915 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CFREI_05915 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cfg01011
]
CFREI_05915 (ddl)
Enzymes [BR:
cfg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CFREI_05915 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
cfg01011
]
Precursor biosynthesis
Amino acid ligase
CFREI_05915 (ddl)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_3
ATP-grasp_4
CPSase_L_D2
RimK
Motif
Other DBs
NCBI-ProteinID:
WJZ02474
LinkDB
All DBs
Position
1266990..1268066
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AA seq
358 aa
AA seq
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MLVTTDRIRVAVIYGGRSSEHTVSCVSAGAVMGHIDPQKYEVIPVGITLDGVWTVGESNV
EKLQIANRVMPKVELKEELHLSVTPERQGELRYVKDGSLYAKVDVVFPVLHGRFGEDGTI
QGMFELSGVPYVGAGVLASACGVDKEFAKKLMAAEGLPVGREVVLRGRTDLTDSEKAMLG
LPVFVKPARGGSSIGISRVTSWDDLPAAISLATKHDEKVIIEAEIVGVEVECGVLQYPDG
RVVASVPAQLVGTDSGDEGFYGFDTKYLDDVVSAQIPAPLDQATTELIQSLAIETFHALS
CDGLARVDFFVTSDGPVLNEINTLPGFTPISMYPKVFAASGVPYEELLSILIERALAR
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgtgactaccgaccgtattcgtgttgccgttatttacggtggccgcagctctgaa
catactgtttcctgcgtttctgctggcgctgttatgggccacattgatccgcaaaaatat
gaagtaatccccgttggcattacccttgatggggtgtggacagttggagaatcgaatgta
gagaagctccaaattgctaaccgagttatgccaaaagtcgagttgaaggaggaattgcat
ctttctgtaactccagaacgtcaaggtgaattacgctatgtaaaagacggaagcctatat
gcaaaagttgatgtagtttttcctgtattgcatgggcgatttggggaagacggcacgatt
caaggcatgtttgaactttccggtgtgccatatgtaggcgcaggggtgttggcttccgca
tgtggagtggataaagaattcgctaaaaaactcatggccgctgaaggtctaccagtaggt
agggaagtggtattgcgggggcggactgaccttactgatagcgaaaaagccatgctgggt
ttgccagtatttgtaaaaccagcgcgtggtggatcatctatcggaatttcgcgggtgacc
tcgtgggatgatctaccagctgctatttcgctggcgacaaaacacgatgaaaaagtaatt
attgaagctgaaatcgtcggtgttgaagtcgaatgcggtgtgctgcaatatcccgatggt
cgggttgtggcttcagtgccagcgcaattagtgggaacagattctggggatgaaggtttt
tatggctttgacacaaagtacctggatgatgtggttagtgcgcagattccagcgccatta
gaccaagcaacaacagaattgattcaatcattggctattgaaacattccatgctttgtct
tgtgatggcttagctcgggttgatttctttgtgaccagtgatgggcccgtgcttaatgaa
attaatacgctgcccggctttactccgatctctatgtatccgaaggtgtttgcggcaagt
ggagttccttatgaggaactcctaagcattcttattgagcgcgcgcttgctcgttaa
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