KEGG   Cellulomonas fimi: Celf_0800Help
Entry
Celf_0800         CDS       T01490                                 

Definition
(GenBank) DNA polymerase LigD, ligase domain protein
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
cfi  Cellulomonas fimi
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cfi00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    Celf_0800
Enzymes [BR:cfi01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Celf_0800
DNA repair and recombination proteins [BR:cfi03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Celf_0800
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
LinkDB All DBs
Position
880139..881614
Genome map
AA seq 491 aa AA seqDB search
MPGSKPLDEYRAKRDPARTREPVPPPDAPLPRGDGRTFVIQEHHARALHWDLRLERDGVL
VSWAVPKGLPQEPGTNHLAVHTEDHPMEYATFEGEIAAGEYGAGHMTVWDRGTYETVKWS
DREVQVVLHGERVDGRYVLFRTRGRGGGARDDGRSWMVHRMDPPTRTDWTPLPELVRPMA
AVPGELPGDDAAWAFEMKWDGVRAVAYVDGGRVRLMSRNDLDVTRSYPEVAGLGEQLGSV
QAVLDGELVTFDQRGAPDFGRLQQRMHVADPAVARRLAQSVPVVYLLFDVLHLDGRPTVD
LPYDERRRLLEDLGLAGRSWQTPPAFDGPGAAILAASAENGLEGVLAKRRTSPYRPGRRS
PDWVKVKHVRMQEVVLAGWKPGKGARAETLGALVLGVPDGDGVLRPAGGVGTGFTRRALD
DLLRRLAPLETATSPFVDRLPAAETRDVHWVRPELVGEVAFAGWTSDGRLRHPSWRGLRP
DKDPRDVVREA
NT seq 1476 nt NT seq  +upstreamnt  +downstreamnt
atgcccgggtcgaagcccctcgacgagtaccgcgccaagcgggacccggcgcgcacgcgc
gaaccggtgccgccgccggacgcgccgctcccgcggggcgacggccgcacgttcgtgatc
caggagcaccacgcccgcgcgctgcactgggacctgcgcctggagcgcgacggcgtgctg
gtctcgtgggccgtgccgaagggcctcccgcaggagcccgggacgaaccacctcgcggtg
cacaccgaggaccacccgatggagtacgcgacgttcgagggcgagatcgcggcgggggag
tacggcgccgggcacatgacggtgtgggaccgcggcacctacgagacggtgaagtggtcg
gaccgcgaggtgcaggtcgtgctgcacggcgagcgcgtcgacggccggtacgtgctgttc
cggacccgcgggcggggtggcggcgcgcgcgacgacggccggtcgtggatggtgcaccgc
atggacccgccgacgcgcaccgactggacgccgctgcccgagctcgtgcgccccatggcg
gccgtgcccggcgagctgccgggtgacgacgcggcgtgggcgttcgagatgaagtgggac
ggcgtccgggccgtcgcctacgtcgacggcggccgggtccggctcatgtcgcgcaacgac
ctggacgtcacgcgctcgtacccggaggtcgccgggctcggcgagcagctcggctcggtg
caggccgtgctcgacggggagctcgtcacgttcgaccagcgcggcgcccccgacttcggc
cgcctccagcagcgcatgcacgtcgccgacccggccgtcgcgcgccgactcgcgcagtcc
gtgcccgtcgtctacctgctgttcgacgtgctgcacctcgacgggcgccccaccgtcgac
ctcccctacgacgagcgccgccggctgctggaggacctcgggctcgccgggcgctcctgg
cagacgcccccggcgttcgacggacccggtgccgcgatcctcgcggccagtgccgagaac
gggctcgagggcgtgctggccaagcgacggacctcgccgtaccggcccggccgccgctcg
ccggactgggtcaaggtcaagcacgtccgcatgcaggaggtcgtgctggccggctggaag
ccgggcaagggggcgcgcgcggagaccctcggtgcgctcgtgctcggcgtgcccgacggc
gacggggtgctgcggcctgcgggcggcgtcggcaccgggttcacgcgccgtgccctcgac
gacctgctgcgccgcctcgcgcccctcgagaccgcgacgtcgccgttcgtcgaccgcctg
cccgccgccgagacgcgcgacgtgcactgggtccgtcccgagctcgtcggggaggtcgcg
ttcgccggctggacgtccgacggccggctccggcacccgtcctggcgcggcctgcgcccg
gacaaggacccgcgcgacgtcgtccgggaggcctga

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