KEGG   Cellulomonas fimi: Celf_1767Help
Entry
Celf_1767         CDS       T01490                                 

Definition
(GenBank) DNA ligase I, ATP-dependent Dnl1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
cfi  Cellulomonas fimi
Pathway
cfi03030  DNA replication
cfi03410  Base excision repair
cfi03420  Nucleotide excision repair
cfi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cfi00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    Celf_1767
   03410 Base excision repair
    Celf_1767
   03420 Nucleotide excision repair
    Celf_1767
   03430 Mismatch repair
    Celf_1767
Enzymes [BR:cfi01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Celf_1767
    6.5.1.6  DNA ligase (ATP or NAD+)
     Celf_1767
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Celf_1767
DNA replication proteins [BR:cfi03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    Celf_1767
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     Celf_1767
DNA repair and recombination proteins [BR:cfi03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Celf_1767
   NER (nucleotide excision repair)
    Other NER factors
     Celf_1767
   MMR (mismatch exicision repair)
    Other MMR factors
     Celf_1767
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_A_N RNA_ligase PNKP_ligase mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID: AEE45899
JGI: Celf_1767
UniProt: F4GYB0
LinkDB All DBs
Position
complement(1952763..1954295)
Genome map
AA seq 510 aa AA seqDB search
MLLADVAATSAAVAATRSRLAKRALLVDVLRRAEPEDVPVVARYLAGELRQRRTGLGWRS
LASLPGPAAGPSLTVAAVDAAFAHMAQLEGPGSATERSRLAAELFAAATGPEQALLRGLV
SGELRQGALDALLLDALAEAAGVPPDAVRRAAMLAGATEPVAVAALGAADPQAALEALAA
FTLTVGRPVRPMLAQSAPDVATAVAGLGGGPVVVDTKLDGIRIQVHRTADDVRVYTRSLD
DITARVPEIVEAVRAVPASTLVLDGEALVVDDTGRPVPFQDTAARSATKDADVAAAVRLT
PFFFDCLHVDGRDLLDSPLTERLAVLDATVGPAAVTRLVTADPDAAQDWFARVVAAGQEG
VVVKAADAPYEAGRRGAAWVKVKPRHTLDLVVLAVERGSGRRSGWLSNIHLGARDGHGGF
VMLGKTFKGMTDEMLAQQTERFRELEVSDDGWTVTVRPEQVVEIAFDGVQRSTRYPGGVA
LRFARVVRYRDDKSAAQADTIDAVRALHAP
NT seq 1533 nt NT seq  +upstreamnt  +downstreamnt
atgctgctcgccgacgtcgccgccacctccgcggccgtggccgcgacccgctcgcgcctc
gccaagcgtgcgctgctcgtcgacgtcctgcgccgcgccgagcccgaggacgtgcccgtc
gtcgcgcgctacctcgcgggcgagctgcggcagcggcgcacgggcctcggctggcgctcg
ctcgcgtccctgcccggccccgcggccgggccgtcgctcaccgtggcggccgtcgacgcg
gccttcgcgcacatggcgcagctcgaggggcccggttccgcgaccgagcggtcccggctc
gccgccgagctgttcgccgccgcgacgggaccggagcaggcgctgctgcggggcctcgtg
tccggcgagctgcggcagggcgcgctcgacgcgctcctgctcgacgcactcgccgaggcc
gccggggtgccgcccgacgccgtccggcgcgccgcgatgctcgccggcgcgacggagccc
gtcgccgtcgccgcgctcggggccgccgacccgcaggcggccctcgaggcgctggccgcg
ttcacgctcaccgtcggccggccggtccggcccatgctggcgcagtccgcacccgacgtc
gcgaccgcggtggcagggctcggcggcggtcccgtcgtcgtcgacaccaagctcgacggg
atccggatccaggtgcaccgcaccgccgacgacgtccgcgtctacacgcgcagcctcgac
gacatcacggcccgcgtgcccgagatcgtcgaggcggtccgcgcggtgcccgcgagcacc
ctggtcctcgacggcgaggccctcgtcgtcgacgacaccggccggcccgtgccgttccag
gacaccgccgcgcgcagcgcgacgaaggacgccgacgtcgccgccgcggtgcgcctcacg
ccgttcttcttcgactgcctgcacgtcgatggccgcgacctgctcgactccccgctcacc
gagcgtctcgccgtcctcgacgccaccgtgggaccggccgccgtgacccgcctcgtcacc
gccgacccggacgccgcgcaggactggttcgcccgcgtcgtcgccgccgggcaggagggt
gtcgtcgtcaaggccgcggacgccccctacgaggcgggccgccggggtgccgcgtgggtc
aaggtcaagccgcgccacaccctggacctcgtcgtgctcgccgtcgagcgcgggtcgggc
cgccgcagcgggtggctgtcgaacatccacctcggcgcgcgcgacgggcacggcgggttc
gtcatgctcggcaagacgttcaagggcatgaccgacgagatgctggcccagcagacggaa
cgcttccgcgagctggaggtctccgacgacggctggaccgtcaccgtccggccggagcag
gtcgtcgagatcgcgttcgacggcgtccagcgctcgacgcgctacccgggcggtgtcgcg
ctgcggttcgcgcgagtcgtccgctaccgcgacgacaagtccgccgcgcaggccgacacg
atcgacgccgtccgcgcgctccacgcgccgtag

DBGET integrated database retrieval system