Chitinophaga filiformis: MYF79_13355
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Entry
MYF79_13355 CDS
T08225
Name
(GenBank) PKD domain-containing protein
Organism
cfil
Chitinophaga filiformis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
ChitinaseA_N
CHU_C
Bact_surface_Ig-like
Big_13
Motif
Other DBs
NCBI-ProteinID:
UPK72275
LinkDB
All DBs
Position
complement(3342098..3346972)
Genome browser
AA seq
1624 aa
AA seq
DB search
MPLKTETTLGNVLTFAILWSLLLLTTVAHAQLKADFTPSKTSDCESLITQFIDKSDGNPV
SWQWNLGNGFTSTEQSPSAAYTSPGTYNVTLTVKNAAGNTSTVTKTVTVWAKPEPDFSAS
PASGCMPLTVAFTDKSDPVGGTITAYSWDFGDGVLGTGSNPVHTYKDVLMPTVTLTVTNS
NGCTASKKVSKIVEVAAALKVNFTVSDNLVCSTPGAITVNNTTTGPGNLTYQWDFGDGAT
ASGANPGPHNYTTKGVYKIKLTVTSDKGCTDTKTSEDIKVATFTSDFRVPASLCDNSSAT
FIPLNTPQADKVTWSVDKGSITANGVYTPAGTGPVKVTMTATYDKCQETITKDVTVTAAP
QADFTTNIKPICDAPVTVNLINRSQGANSWSWDFGNGQTSTQQNPVVTYSNLGTFNIKLT
ATSASGCAATATQSIDLVKPRVDINASVPTGCEGISTRFTSYITPGDSIISYEWDFGDGS
PKSTEATPTHTYDKEGKYAASLSYTTRNGCKGTVSFQSDNAIRIYKKPKPDFTSPEAPTI
CGNNTVHFEATTDVGNKWTWDYGDNSGDVSSSKSTTHSYKRPGTFTVSLSVSNYTCSSEK
VTKVGYITAVNPFSRFTMQPVDCNNRTEMTFNDKSIGTVTSWKWSWGDGKEDAYTTKTST
IKHKYAQTGTYKVKLTVSDGSCTSSDSMMVQVYAPSPVTITADKATLCGSDTLKASVTAI
NKDIYGLNVWSYRWTSSDSTPAETSNYQNAVFHNLLPGTDTIRFVAYNLQGCPDTSNRIV
ANVHGPVAKFLVPPPECRTTELTFTDRTNTSKGKPITKWSWDFGDSSAAQVFTAAPFKHT
YNQSGYFYPKMTVTDQDGCTSTASGPRVQVNGPNADFAPSALLIPPGGNVQFYNYTTETG
GTATYHWDFGDGTSSADKSPVKNYPKRGVYTVTLFVRDNNGCSDSAQAQIKVSTISASFT
VTTSFVNNSECPPVIAKFTNTSMHYKSSFWYFGDGSFSTIDNPSHTYTNAGKYKVRLKVI
GEAGNEDIYEQELEVKGPYGTIKTSSNGGCLTKDIEFKVSAIAAYHFTWDFTDGIVSETG
DSVIKHTFKNPGIYQPRLILSDSAGCKGAAFLTDPIVIDKLEVEMTPSPKFVCDEGWVSF
APTFNSFSIDSLKKQAKYKWTYEPGVRAEDDTTANARFYVNKAQDYNFTLTTTTAYGCTQ
SVTEKVTVYPKPDVTISGPAQACQDAPVSFSGNVTKTPDVIWNWTFGNGNTATVRQPDDQ
TFSKTGPADVYLIATSSSGCTDTAYHTINIMPKPVANATAASEVVCLGAGTTLNATGGVT
YEWWPAESLNNPKSASPLASPSVNTTYQVAVTDANGCKDTGDVSISVALPFRVLATPDTA
ICQGQTVPLRASGADRYVWKGQFLDDANSPNPNVTIAAAGTYTYEVTGYDDEGCFTHDTS
LVITVNPAPTIDAGPDRTVTAGRPITLRTQASPDVVKWNWSPAEYLSCTTCAVPEALPNL
STTYRVEVENRFGCKATDEVAFKITCNEGAIFLPTAFSPNRDGQNEWFYPKGRGVKEVVY
MRVYDRWGSLVFERMHFQINTANAGWDGTWKNQVAPIGSYVYAIETLCEEGGKFMFTGTV
TIVR
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atgcccctaaaaaccgaaacaactttaggcaatgtcctcacatttgctatactctggagc
ctactcttgctgactactgttgcacacgcacaattgaaagcagatttcactccgagtaag
acaagtgattgtgaaagtcttatcacacaattcattgataagtctgacggtaatcctgtt
tcctggcaatggaacctgggtaatggcttcacatctacagagcaaagccccagcgccgct
tatacttctcccggcacttacaatgtaacgctgacagtaaaaaatgctgcaggcaatacc
agcactgtaaccaaaactgttaccgtctgggccaaacctgaaccggatttcagtgccagc
cccgccagtggttgtatgccgcttactgttgctttcaccgataaatcagatcctgtagga
ggtaccatcactgcctacagctgggatttcggggacggcgttctcggcacaggcagcaat
ccggtgcatacctacaaagatgtattgatgcctaccgtaacgcttactgttaccaatagc
aatggatgtactgcctcaaaaaaggtcagtaaaattgtagaggtggcagccgcattgaag
gtcaacttcaccgtatctgacaacctggtgtgtagtactcccggtgcaataactgttaat
aacaccaccaccggccccggcaatcttacctaccagtgggactttggcgatggcgctact
gcctccggagcgaaccctggtccgcacaactatactacaaaaggggtttacaagataaag
ctcactgttaccagcgacaagggatgtactgataccaagacctccgaagatatcaaggta
gctacttttacatcagacttccgcgtgccggcctctctttgtgataacagttctgctacc
tttatcccactcaacacaccacaggccgataaggttacctggagtgttgataaaggcagc
atcaccgcgaatggtgtttatacgccggcgggcacaggtcctgtaaaggtgactatgacg
gcaacttacgataaatgccaggagacgataacaaaagacgtgacggtgaccgctgctccg
caggcagactttacgaccaatataaaacccatctgcgatgccccggttactgtgaacctg
atcaatagatcgcagggcgctaacagctggagctgggactttggcaacggacaaacatcc
acccaacaaaaccctgttgtaacctacagcaacctgggaactttcaatatcaaacttacc
gctaccagtgcatcaggttgcgctgctacagcaacacaaagtatagatctggtaaaacca
cgggtggatatcaatgccagcgtgcctaccggttgtgaagggatttctaccaggttcacc
agctacatcacgccgggcgattctattataagttatgaatgggatttcggcgacggcagc
cccaaatcgacagaggcgactcccacacatacctacgacaaggaaggaaaatacgccgca
tcactgagttataccaccaggaatggctgtaaaggcacggtaagttttcagtcggataat
gccatccgtatttataaaaagccaaaaccagatttcacatcgccggaagcgcccacaatc
tgcggtaacaacacggtacattttgaggcgacgacagatgttggtaacaaatggacatgg
gattatggagataattcaggagatgtaagcagctcaaaaagtactacacacagctacaag
cgaccaggcacctttacggtgtcgctgagcgtttccaactacacctgcagcagcgaaaaa
gttacaaaggttggttatatcaccgcagtaaatcctttttcacgctttaccatgcagccg
gtcgactgtaataacagaacagagatgaccttcaatgacaagtccatcggcactgttacc
agctggaaatggagctggggcgatggaaaggaagatgcctacacgaccaaaacaagcacc
atcaaacacaaatacgcccaaaccggcacctacaaagtgaagttaactgtctccgacggg
tcctgtaccagctccgactctatgatggtccaggtttatgcaccctcacctgttactatc
accgcagataaagcaaccctgtgtggcagcgatacgctcaaggcaagtgtaacggctatc
aataaagatatctatggcttaaatgtatggtcctacagatggacctcttcagacagtact
cctgccgagaccagcaattaccagaacgccgttttccataacctgctgccgggtaccgac
accatccgctttgtagcgtataacctgcagggatgccccgataccagcaacaggatcgtt
gcgaatgtacatggaccggtggcaaaattccttgttcctccccctgaatgccggactacg
gaactgacatttaccgacaggacaaatacctccaaaggcaagcctataaccaaatggtca
tgggattttggcgacagcagcgctgcacaggtatttactgctgctcctttcaaacatacc
tataaccagtcggggtacttctatcctaaaatgaccgtcacagaccaggatggctgtacc
agcactgcctccggccccagagtacaggtgaatggccccaacgcagactttgccccaagc
gccttactgataccaccgggcggaaatgtgcaattctataattatacgaccgaaaccggc
ggtactgctacctaccattgggacttcggagacggtaccagctccgcagataagagccct
gtgaagaactatccgaaaagaggcgtatatacagtgacgctgtttgtaagggataataat
ggttgtagcgacagcgcccaggcacagatcaaggtctctaccattagtgccagctttact
gttactacttctttcgtaaataatagtgaatgccctccggtgatcgccaaattcaccaat
acgtctatgcactataagagctcgttctggtattttggcgatggcagcttttcaactatc
gataacccatcccatacctacaccaatgccgggaagtataaagtaagattgaaggtgata
ggagaagccggcaacgaagacatctacgaacaggaactggaggttaaaggcccttatggt
acgattaagacgtcttccaatggcggttgcctgacgaaagatatcgaattcaaagtatcg
gcaattgcagcgtatcattttacgtgggactttacagatggtattgtgagcgaaacagga
gattctgtcattaagcataccttcaaaaatccgggcatttatcagccacggctcatactc
tccgattcggctggttgtaaaggagcagccttcctgactgatcctatcgtgatagataaa
ctggaagtggaaatgacgccttctccgaaatttgtatgcgacgaaggctgggtttctttt
gcaccgacattcaacagcttctccatcgactccctgaaaaaacaggcgaaatacaaatgg
acatatgaaccgggcgttcgtgcagaagacgatactaccgccaatgcccgcttctatgtg
aataaggcacaggattataactttacgctcactactaccacggcttatgggtgtacgcag
tcggtgacggaaaaggtgaccgtttatcctaaaccggacgtgaccatcagcggtcctgcg
caagcctgccaggatgcaccggtaagcttcagcggaaatgtgacaaagacacctgatgtg
atctggaactggacctttggcaatggtaacaccgctaccgtacggcaacctgatgatcag
accttcagtaagaccggccctgcagatgtatacctcattgccaccagcagcagtggctgt
actgacacggcatatcacacgatcaatatcatgcctaaacctgtagctaatgctactgca
gcatccgaggtggtatgcctcggcgccggcactacgctgaacgcgaccggtggtgttact
tatgaatggtggcccgctgaaagccttaacaatccgaaatcagcatccccacttgcaagc
cccagcgtcaacaccacctaccaggtagcggtgacagacgccaacggctgtaaggatacc
ggcgatgtaagcatcagcgtagcattgccattcagggtactggcaacgccggataccgcc
atatgccagggacaaacagtacctttacgggcatccggcgcagatcgttatgtatggaag
ggacaattcctggatgatgccaacagtccgaatcctaatgtgaccatcgcagcagcagga
acttacacctacgaagtaacaggttacgacgatgagggttgtttcacgcacgacacctcc
ctggtaataacggtcaatcccgctcctactattgacgccgggcctgaccggacagtaaca
gcaggaagaccgatcacacttcgtacacaggccagcccggatgtggtaaaatggaactgg
agcccggcggaatacctcagttgcaccacctgcgccgtaccggaagctttacccaacctg
tctaccacctacagagtggaagtagagaacagattcggctgtaaggcgaccgatgaagtg
gccttcaagataacctgtaatgagggcgctatattcctcccgactgccttctctcccaac
agggacggccagaatgaatggttctatcctaagggacgcggcgtaaaagaggtggtatac
atgcgggtatacgacagatggggcagcctggtgtttgagcggatgcatttccagatcaat
accgccaacgcaggatgggatggtacctggaagaatcaggtagcaccaatcggcagttat
gtatatgcgattgaaacgctttgcgaggaaggtggtaaattcatgttcacaggtactgta
acgatagtaagataa
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