Chitinophaga filiformis: MYF79_13800
Help
Entry
MYF79_13800 CDS
T08225
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
cfil
Chitinophaga filiformis
Pathway
cfil00470
D-Amino acid metabolism
cfil00550
Peptidoglycan biosynthesis
cfil01100
Metabolic pathways
cfil01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MYF79_13800
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MYF79_13800
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
MYF79_13800
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cfil01011
]
MYF79_13800
Enzymes [BR:
cfil01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
MYF79_13800
Peptidoglycan biosynthesis and degradation proteins [BR:
cfil01011
]
Precursor biosynthesis
Amino acid ligase
MYF79_13800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATPgrasp_YheCD
GARS_A
RimK
DUF5769
Motif
Other DBs
NCBI-ProteinID:
UPK72361
LinkDB
All DBs
Position
3447596..3448585
Genome browser
AA seq
329 aa
AA seq
DB search
MKKNIALVAGGYSGEYVISVQSAAVIEKNIDSSKYNVYKISVTRDGWNYIGADGQAVAVD
RNDFTLTINGSKIKFDAVFIGIHGTPGEDGRLQGYFEMLGIPFTSCGMVTSALTFNKSYC
NKVVASLGVVNVSKSVHIFRDQPFDTKEILRELKLPVFVKPAEGGSSIGMSKVNTAEELE
PAIEKAFKEDVQILIEEFIKGREMTCGLYKSNGELTVLPVTEIISSKEFFDYEAKYTPGV
TREVTPAEAPAEVTNLIQETAKKLYNKLNCRGIVRMDFIWEEANNRLFFLEVNTMPGQSE
NSLVPQQVRAAGKTLQEFYGTLIEECLRK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaacatcgccctggttgccggcggatactccggtgaatatgtgatttcagta
cagagtgccgcagtaatagaaaagaatattgacagtagcaagtataacgtatataagatc
tctgttacccgtgatggttggaattacatcggcgctgatggccaggcagttgcagtagac
aggaacgatttcacattgacgatcaatggcagtaagataaaattcgatgcagtattcatc
ggtatacatggtacgccaggcgaagacggccgtttgcagggatattttgaaatgctgggc
attcctttcaccagctgtgggatggtaacctccgcgctgaccttcaataagagctactgt
aataaagtagtggcttccctgggtgttgtaaacgtttcaaaatcagtacatatctttcgt
gatcaaccgtttgataccaaagagatactccgtgaactgaaattgccggtatttgttaaa
ccggcagaagggggcagcagtatcggcatgtctaaggtaaataccgcagaagagctggaa
ccggctatcgaaaaagcctttaaagaggatgtacagatcctgatagaagaatttatcaag
ggcagggaaatgacctgcggtctatataaatccaatggagaactgaccgtactgccggta
actgagatcatcagcagcaaggaattctttgactatgaagcgaaatataccccgggcgta
accagggaggtaacaccggcagaagcgcctgcagaagtgaccaacctgatacaggaaaca
gctaagaaattgtataacaagctaaattgccgtggaatagtgagaatggatttcatctgg
gaagaagcgaacaaccgcctgttcttcctggaagttaacacaatgccgggacaatcagag
aacagtctcgtacctcagcaggtaagagctgccggtaaaactctgcaggagttttacggc
acattaattgaagagtgcctgaggaagtaa
DBGET
integrated database retrieval system