Cytobacillus firmus: NAF01_08685
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Entry
NAF01_08685 CDS
T08260
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
cfir
Cytobacillus firmus
Pathway
cfir00300
Lysine biosynthesis
cfir00550
Peptidoglycan biosynthesis
cfir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NAF01_08685
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NAF01_08685
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cfir01011
]
NAF01_08685
Enzymes [BR:
cfir01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
NAF01_08685
Peptidoglycan biosynthesis and degradation proteins [BR:
cfir01011
]
Precursor biosynthesis
Amino acid ligase
NAF01_08685
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Prismane
MoCF_biosynth
Motif
Other DBs
NCBI-ProteinID:
URT72502
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Position
1664812..1666272
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AA seq
486 aa
AA seq
DB search
MELHKLLRFLQPYMTYKGENPEITAIVNDNRKVLPGSLFICIEGYTVDGHDFAASAAEKG
AAAVIAQKELDLDIPVIVVKNTKRAMAVLADAFYEQPSKQLHLIGITGTNGKTTTSHLIE
KILADAGRKTGLIGTMYTKIADETFEVKNTTPESLTLQSTFRKMADAGVDSAVMEVSSHA
LVEGRVHGCDFNIAVFTNLTQDHLDYHKTMDEYRRAKGLLFAQLGSAYNQGEPKYAILNS
DDPASAEYEKSTAAHVISYGIDQEADLRAVNIQMTAAGTEFDLLSPFGKHKVSLKMIGKF
SIYNVLASIGAGIAAGISISQIIKSAEEVQGVAGRFETVDAGQDFSVIVDYSHTPDSLKN
ALETVKQFALKRIFAIVGCGGDRDRSKRPLMAEIACQYSTDPIFTSDNPRSEDPIQILRD
MEEGVKEESYKIIVDRKEAIHYAVKNASAGDVILIAGKGHETYQIVGSHVFDFDDRLVAK
EAIEER
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggaattacataaactgctgcgatttttacagccttatatgacatataaaggggaaaac
cctgaaatcacagcgattgttaacgataaccggaaagttctgcctggaagtctgtttatt
tgcattgagggctatacggtggatggccatgactttgcagcttctgctgccgaaaaaggc
gcagcagctgtaattgcccaaaaagagctggacttagatatcccggttatagtagttaaa
aatacaaaacgggcgatggccgtgctggctgatgctttttatgaacagccgagcaagcag
cttcatctaattggcataacagggactaatggcaaaacaaccacaagtcatttaattgaa
aagattcttgctgatgcaggaaggaaaaccggcttaattggcacgatgtatacgaagatt
gccgatgaaacttttgaagtgaaaaatactactcctgaaagcctgactttgcaaagcaca
tttagaaaaatggcagatgccggtgtggattcagctgtaatggaagtgtcttctcatgca
cttgttgaaggccgtgttcatggctgtgattttaatatagccgtatttacgaacctgaca
caggatcacctggattatcataaaacgatggatgaatacagaagagcaaaagggctgttg
tttgcccagcttggaagcgcctataatcaaggagaaccgaagtatgccattttaaattca
gatgaccctgcttccgcagaatatgaaaaatcgacggctgctcatgtcatttcctacgga
attgatcaggaagctgatctgcgggccgttaatattcaaatgactgctgccggtacggaa
tttgacttactctctccattcggaaagcataaagtttctttaaaaatgataggaaagttc
agcatctataatgtactggcaagtattggagcaggtatcgctgcaggcatatcaatctct
caaatcattaaatctgcagaagaagttcaaggggtagccggcagatttgaaaccgtagac
gcaggccaggatttttctgtgattgttgattattcacatacaccggacagcctgaaaaat
gcgctggaaacggtaaagcaatttgccctgaagcgcattttcgccatcgtgggctgcgga
ggagacagagacagatccaaacgaccgttaatggcagaaattgcctgccaatacagtaca
gacccaatctttacttcagataatccgagaagtgaagacccgatccaaatcctgagggat
atggaagagggagtaaaagaagaaagttataaaataatcgtcgatcgaaaagaagccatt
cactatgcggtgaaaaatgccagtgcaggagacgttatcttaatagcaggaaagggccat
gagacctatcagattgtaggcagccatgtttttgactttgatgaccgtctggtggcaaaa
gaggctatagaggagcgataa
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