Cytobacillus firmus: NAF01_20365
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Entry
NAF01_20365 CDS
T08260
Symbol
pepV
Name
(GenBank) dipeptidase PepV
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
cfir
Cytobacillus firmus
Pathway
cfir00300
Lysine biosynthesis
cfir01100
Metabolic pathways
cfir01120
Microbial metabolism in diverse environments
cfir01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NAF01_20365 (pepV)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cfir01002
]
NAF01_20365 (pepV)
Enzymes [BR:
cfir01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
NAF01_20365 (pepV)
Peptidases and inhibitors [BR:
cfir01002
]
Metallo peptidases
Family M20
NAF01_20365 (pepV)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
URT70133
LinkDB
All DBs
Position
complement(4038301..4039719)
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AA seq
472 aa
AA seq
DB search
MNVLDWQKEVNKRKDELIKDTQNLLRIRSLLDEENATEDAPLGEGVKEALDFMLALGEKD
GFTVKNVGSLAGHLEFGEGEEIVGVLCHVDVVPEGDGWTSDPFGAEIRDGKIFARGAIDD
KGPTMAAYYAMKIVKELELPLSKRVRMIIGTDEESDWRCVEHYFKHEEMPSIGFAPDADF
PIIYAEKGISDFDLVQTGYNEEADREVLAEVVYFQAGRRYNMVPDFAKASLVVHLEHTEV
VQRYINFLKKTELEGKYYIDNGELILELQGISAHGMEPDNGKNAGILMASFLASLQLDEK
ACQYFQFVSQYLCDDSRGRKLGIACTDDITGDLTINVGKLLYTKENGGRLGFNVRYPVTN
DMGETKNKLESLIENEHFRLENFSDAKPHHVEEDDVLIQTLKKVYEQQTGEKAELLSIGG
GTYARSLKSGVAFGPLFPGREDVAHQKDEYMFIEDLLKAAAIYAQAIYELAK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtattggattggcaaaaagaggttaataagagaaaagatgaattaataaaggat
actcaaaaccttttgagaatcagaagtctgctggatgaagagaatgcaacagaagatgct
ccccttggtgaaggtgtaaaagaagcgctcgatttcatgcttgcacttggtgaaaaggat
ggattcactgtaaaaaatgtcggcagcctggctggtcatctggaattcggcgaaggcgaa
gaaattgttggagtactttgtcacgttgacgtggttccggaaggagatggatggacaagc
gacccgtttggtgcagagattcgcgatggaaagatctttgccagaggggcgattgacgac
aaaggcccaacgatggctgcttattacgccatgaaaattgtgaaggaattagagctgcct
ttaagcaaacgggtccgaatgattatcggaacagatgaagaaagcgattggcgctgtgtg
gagcattatttcaaacacgaagaaatgccttcaattggatttgctccggatgcagatttc
ccaattatttatgctgaaaaaggcatctctgattttgatcttgtccaaactggatacaac
gaagaagcagacagagaagtattggcagaggttgtctatttccaggcaggaagaagatat
aacatggttcctgattttgcaaaagccagtcttgtggttcaccttgaacatactgaagtg
gtgcaaaggtatattaatttcctgaaaaagacagagcttgaaggcaagtattacatagat
aatggcgagctgatactcgaactccagggaatctcagcacatgggatggagcctgataat
gggaaaaatgccggtatactgatggcatcattcctggcttctcttcagctggatgagaag
gcatgccaatattttcagtttgtatcacaatacttatgtgatgattccagaggaagaaag
cttggcatcgcctgcacggatgatattacaggcgacttaaccatcaatgtaggcaaactt
ttatatacgaaggaaaatggcggccgtttaggctttaatgtacgctatcccgttacaaat
gatatgggagaaacgaaaaacaagcttgagtctctaatcgaaaacgaacatttcagattg
gagaatttctcagatgccaagcctcatcatgtggaagaagatgatgttttgattcaaaca
ctgaaaaaagtatatgaacagcagactggcgaaaaggcagagcttttatccattggcggg
gggacatatgcacgctcattgaaatcaggagttgcatttggcccgctcttcccaggcagg
gaagatgtcgcacatcaaaaagatgaatatatgtttattgaggatttgttaaaggctgca
gccatttatgcacaggcgatttatgaacttgcgaaataa
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