Colletotrichum fioriniae: CFIO01_01863
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Entry
CFIO01_01863 CDS
T04796
Name
(GenBank) DNA ligase I
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CFIO01_01863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfj03400
]
CFIO01_01863
Enzymes [BR:
cfj01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
CFIO01_01863
DNA repair and recombination proteins [BR:
cfj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
CFIO01_01863
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
DNA_ligase_A_C
RNA_ligase
BRCT
RTT107_BRCT_5
LIG3_BRCT
DNA_ligase_IV
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
EXF82403
UniProt:
A0A010SCH0
LinkDB
All DBs
AA seq
997 aa
AA seq
DB search
MSQRKRQKSPDAAAIDEEERHYAIGGTTLDELNEKYPNRPRNHSKTMRFSELFQSLFNPL
NENKKQPAGRGPPRSKKGPHGPHKPSPQEQRRHLIERFISRWRNEVGNDIYPALRLILPD
KDRDRGVYGLKENAIGKILVKLMKIDKNSEDGHNLLHWKLPGQTTFSRLAGDFAGRCFEV
LSKRPMRTEVGDMTIAEVNELLDKLAASTGELENLEVFEIFYERMNAEELMWLIRIVLKQ
MKVGATERTFLDLWHPDGEALFSVSSSLRRVCWELFDPRIRLEQENTGVTLMECFQPQLA
QFQMPSSFQKMVDYLRTTEEDPEFWIEEKLDGERMQMHMAEDPSVSGGLRFCFWSRKAKD
YTYLYGNGLKDEKGALTRHLADAFSEGVRNVILDGEMITWDPEVDKIMPFGTLKTAALAE
QNNPYNNTGPRPLYRVFDILLLNDQPLTQYTLRDRHRALEKAVKGVHRRLEIHEYESATT
PEAIEPLLRKVVAEASEGLVLKNPRSMYRLNSRNDDWLKVKPEYMSEFGESLDCVVIGGY
YGSGHRGGAISSFLCGLRVSENHIQAGANPEKCFSFFKVGGGFTAADYAEIRHRTDGKWT
TWDPKKPPVEYIELAGGDRQFERPDVWIRPSESVVVEAKAASIGNSDQFALGFTLRFPRF
RKLRTDKNWDEGLSVQEFLDLRRRVEAEAKEKTMSVENRKRKSVKRVKREVVIAGTENMP
AQFQADKSKVFEGLEFCVLSESLKPFKKTKAQLETLIKENGGQVSQRAVPQSGMILLADK
NVVKVASLVKEGQKGSGVDIIRPKWIQDCLEQADDSLLVPYEERHLLHATEALKTVALQN
TDMYGDSYARDISLVELREVLNMMPKKEPDTEPFNKTQFLNQLEERGRGVGPMKGSMFHR
CAVHLVNVEEGDEDEIKMLKLRNYLTFGGARLISDVDDTEATHMVVVGADTRRKDAAAAL
REEVSRRRKIPHIVTAEWIEDCWREKTLLDEEKYTRV
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcgcaagcgacaaaagtcgccagacgcggcggcgattgatgaggaggagagg
cactatgctataggagggaccacactcgatgaactaaacgaaaagtacccaaatcgccca
cgcaatcattcaaagacgatgcgcttttcggaacttttccaaagcctcttcaatcctttg
aacgagaacaagaaacagccagccggtcgcggtccacctcgcagcaaaaagggcccccac
ggaccacacaagccatcgccgcaggaacagagacggcacctcattgagcgctttatttcc
agatggcggaacgaagtgggaaacgacatttatccggctttacggctcattctgcccgac
aaggatcgggaccgcggcgtctacggcctgaaggagaatgctattggcaaaatcctcgtc
aagctcatgaagatcgacaagaactcggaagacggccacaatctccttcactggaagttg
ccaggtcaaaccaccttctcgaggctggctggcgactttgcaggtcggtgtttcgaggtc
ctttccaagcgaccgatgcggacggaagtcggcgacatgacgattgccgaggtcaatgag
ttgctggacaaactcgctgcatccacgggagagctggagaacctagaggtctttgagatt
ttctacgagcgcatgaatgcggaggaacttatgtggttgattcgcatcgtgctcaagcag
atgaaggtcggcgcaaccgagcggacctttcttgacttgtggcatccggacggcgaggcc
ctgttcagcgtgtcgtcgagtctgcgacgcgtctgctgggagctttttgacccaaggatt
cgtctcgagcaggagaataccggtgttactctgatggaatgcttccaacctcagctggcg
cagttccagatgccatcctctttccagaagatggtcgattacctccgaaccacagaagaa
gaccccgagttctggatcgaggaaaagttggacggtgagcgcatgcaaatgcacatggct
gaagacccaagcgtttcgggagggctgcgtttctgcttctggtctcgcaaagcgaaagac
tacacctacctgtacggcaacggattgaaagacgagaagggagctctgactcgccatctg
gcagacgccttttccgagggtgtccgaaatgtcatcctggatggggagatgattacttgg
gacccggaagtcgacaagatcatgccgttcggcactctcaaaacagccgctttagccgag
cagaacaacccttacaacaacacagggccgcgaccgctctaccgcgtctttgatatcctc
ctgctgaacgatcagcccctgacccagtacacgctgcgggaccgtcaccgtgccctagaa
aaggctgtgaagggtgttcacaggaggctggagatccacgaatacgagtctgcgacgaca
cccgaggccatcgagccgctcctccgcaaagtggtcgccgaggcatcagagggcttggtc
ctcaagaacccgaggtccatgtacagactcaacagccgcaacgacgactggctgaaagtc
aagccggagtacatgtccgagttcggagagtctctagattgtgtcgttattggcggttac
tacggctctggacacaggggtggcgccatctccagcttcttatgtggcctgcgtgtcagc
gaaaaccacattcaagccggtgcaaaccccgagaagtgcttcagcttcttcaaggtcggt
ggcggcttcacagcggccgactatgcagagatcaggcatcggacggacgggaagtggacc
acgtgggacccgaagaagcctccagtagaatacatcgagctcgctggcggcgaccggcaa
ttcgaaaggccagatgtttggatccgacccagcgagtccgttgtggtggaggccaaggcc
gcaagcattggtaattcggaccagttcgcactcggcttcaccctgcggttcccccgtttc
cgcaagctgagaaccgacaagaactgggacgagggcctcagcgtgcaggagttcctggac
ctacggcggagggtagaggcggaggccaaagaaaagaccatgagcgtcgagaaccgcaag
cgcaagtcagtaaagcgcgtcaagcgcgaggtcgtcatcgccgggacggagaatatgcct
gcgcaatttcaggcagataagtccaaggtattcgagggtctcgaattctgcgtcctatcg
gagtcgctcaagccgttcaagaagacaaaggctcagctcgagacccttatcaaggagaac
ggcggccaggtctctcagcgggctgttccgcaatccgggatgattctcttggcggacaag
aacgtcgtcaaggtcgcaagtctggtcaaggaggggcaaaagggcagcggcgtcgacatc
atcaggcctaaatggatccaagactgtctcgaacaggctgacgattctctgctagtcccc
tatgaggagcgacacttgttgcatgcgacggaagctctcaagactgttgctctgcagaac
acggatatgtacggggacagctacgcccgcgacatcagtcttgtcgagctgcgcgaggtc
ctcaacatgatgccgaagaaagagcccgatacggagccttttaacaagacgcaatttctc
aatcagctcgaggaacgtggccgaggggtgggtccgatgaagggatcaatgttccatcgt
tgcgccgttcacctggtcaatgttgaagaaggggacgaggacgagatcaagatgttgaag
cttcggaactatctgacctttggcggcgcacgcttgatcagcgatgttgacgacacagag
gccacacacatggtcgtggtaggagctgacacccgaaggaaagatgcggccgctgcttta
cgagaggaagtcagtcggaggcgtaagattccccacatagtgactgcggaatggattgaa
gattgttggcgagagaagacactgctggacgaggagaagtatacgcgagtgtga
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