Colletotrichum fioriniae: CFIO01_07724 Help Entry CFIO01_07724      CDS       T04796                                  Name (GenBank) DEAD/DEAH box helicase   KO K20103   ATP-dependent RNA helicase DDX60 [EC:5.6.2.7] Organism cfj  Colletotrichum fioriniae Brite KEGG Orthology (KO) [BR:cfj00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cfj03019]     CFIO01_07724 Enzymes [BR:cfj01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      CFIO01_07724 Messenger RNA biogenesis [BR:cfj03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Exosome cofactors      CFIO01_07724 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DEAD ResIII Helicase_C PhoH SPAM Motif Other DBs NCBI-ProteinID:  EXF81481 UniProt:  A0A010RM56 LinkDB All DBs AA seq 1803 aa AA seqDB search MASTDDMIMDSLQEWKQRLSPLRVDIVGDFAGKELFTIHGESLVAHCLASANVDYLAGFQ LLHAVHAIEAFLAKLKERGCNFHVLWFDSHQDLATPPDSPKDQSYKYLLTRAVVIEHLRC PKPHPEMSLDDRGIDSPMSYVFPSITSSEFLEYTNHHRFHFVMMSQGRSSDFDTTKEGNL LNIMYLFGLRGYSLAFIDDIEFRSSKVYSLIATAPTSATLVPIIEPTPATKPDPGCRRTI ERLQTIPKPSEWRMLRSDGEVEAQEEVAVTTCAVFLSNKASSDVHNHRLVAAFLSHIALL KHATLLQRPVEAPLKLENSSGIEEFLATFAEVAIDLMQQWPRGEEGQYLNWRVCDLIDGR LYSQVLERLEILQLPSDAASGYAAAVRRLSGVDVSYCMPNSVPQIKSGAGTHRVSYRAPD TQSILAFSHPVLDKYLGDVKLTSQFVMEDESSESKIFQELSHWHNSKKSIDPKHIPKRRG FFASKRNQRYMADTIAYSASLTNSTGKSIDPETIVAKKTDLSARVKKQAGTVRRQGQSIK SGTESALETSRRLREERTQSRTTVVIKNWGEKCRDFDRIPSVPQRYLRVKRYLSSLSPED QKAVGGEIMLYMCNILGLQLIRRPPKKAFSDSESSTLAMIWAQIRDMTSLPLTVETKHQV QYLMKALKFPRGELQDGHSMPVKHQLPFVSTYEVSSKHLQVQTTSLEFQLAHCGPYLERS FDSAPDPRVTFSPDAWQRSVLDAIDHDKSLFVVAPTSAGKTFISFYAMKKILQNNDDDVL VYVAPTKALVNQIAAEVQARFSKSYRHEGRSVWAIHTRDYRVNNPTGCQVLVTVPHILQI MLLAPTNAQNERSWARRVKRIIFDEVHCIGQAEDGIIWEQLLLLAPCPIIALSATVGNPL EFKEWLAGTQKTKGFELEMIVHSARYSDLRKFLYQPPSTLNFEGLEPVERLPIPGLDAEA GETSCFTFVHPVGSIITKNRETLDDASLEPRDCLRLWLTMKESENESFRISPSLKPEIAL PELVKKSDIIKWEAALKAQLWQWQQDPKSPFPEVYKRLKINGPSSAIDLERPEVVADIYG DSSFSLLVDLRSRGALPAILFNYDRLGCEKVILKLLQVLEDAEQKHRDTSTEWARKMDSY QKWRKVKDSKAAKKGAKATRATGAAKSKEERHDAKDSGAALNQADLVREDAGRETSPWES FDPGAPLPQYNFADTTKLTAEDLEARIRSLDDLGIKPRLIDALRRGLGVHHAGMNRQYRQ VVEMLFRKGYLTVVVATGTLALGLNMPCKTVVFIGDSAFLTALNYRQASGRAGRRGFDLL GNVVFHGIPHHRAMEIISSRLPDLRGQFPISVTLILRLFILLHSTNNSQYAIDAVESLLT QTRLFLGGPASQMTVKHHVRFSIEYLRRQHLLSRTGAPLNFSGLVGHLYFTENAVFALHS LLKEGYLHKLCEDFSNPRKQGEIILNLLTVLCHLFCRIPCRKYNNREWLENVVHRSPSVV LLPRLPLEAETVLRNHNKETLRIFKAYVHNFIAQNLQDSPDDQLPFTKRRVGAVGETSDD ISTAQIPILPYPTLRSPFAALSGFTDDFDTIHDLCNTIRSGVFLDESAIPYIPIYPEETN GVPWNAYIYDFYKHGDLNTLVRDNGIKGGDVWFRLKDFSLILATIVTSLENILGRANADD SDMINVRDVGDTIEEERLREESEAKFSDYPATSSATANAKTKFRSSRSKEAVVESWEDVS DGSSEDTHHPSSNASRAFQATESEGTSFGSDREKGGGDGLVKVHMAFRLLQQVFEDKFRK VWA NT seq 5412 nt NT seq  +upstreamnt  +downstreamnt atggcgtccacagacgacatgatcatggattctctacaggaatggaagcagcgtctgagt cctctaagagttgacatcgttggtgactttgctgggaaagagctgttcaccatccatgga gaatccttggtggctcactgtctcgcgtctgcaaatgtcgactacctcgccggcttccag ctacttcatgcggtacatgcgatcgaggccttcctggccaaactcaaggagcggggatgc aacttccacgtcctgtggttcgacagtcaccaagacctagcgacaccacctgactctcca aaggatcaatcttacaaatacctcttgacgcgtgctgtcgttattgagcacttgcgatgt cccaaaccacatcctgaaatgagtctcgacgatcgcggcattgactctccaatgagctac gtgtttccttccatcacgagctccgagttcttggagtacaccaatcaccaccgctttcac tttgtcatgatgtcccaaggcaggtcttcagatttcgacacgacaaaggaggggaatttg ttgaatattatgtatctgtttggtcttcgcggctacagcttggctttcatcgacgacatc gagtttcgaagctccaaggtatattctctcattgcaacagcaccgacctcggcgacattg gtaccaattatagagccaacaccggcgacgaaacccgatcccggctgccgacggaccatc gaacgtctccagaccataccaaagcctagtgagtggcgaatgcttcgatctgacggcgaa gtcgaggcccaggaagaagtagcggtcactacttgcgcagtcttcttgtcgaataaggcc tcttcagatgtacacaaccacagactagtggctgctttcctctcacacattgctctgctg aagcacgcaacgctcttacaacgacccgtggaggctccactcaagctggagaattcttcg ggcatcgaggagttcctcgcgacttttgctgaagtagcaattgacctgatgcagcagtgg cccagaggagaagaaggacaatacctcaattggagagtctgtgatctcattgacggtcga ctctacagtcaggtcttggagagactcgaaatactccaactcccaagtgatgccgcatct gggtatgcagcagctgtacggcgattgtccggcgtcgacgtatcctactgcatgccgaat tccgttccacagatcaaaagtggcgcaggaacacatcgcgtcagctaccgagccccagac acccagtcgatccttgcattcagccatcccgtgttggataagtatctgggagacgtcaag ttgacaagccaattcgtgatggaggatgaaagctctgagtctaaaatctttcaagagctc tctcactggcacaattcgaagaagagcatcgaccccaagcatatcccaaagcgtcgagga ttcttcgcgagcaagaggaaccagagatacatggccgacacgattgcctactctgccagc cttactaattctactggaaaaagcattgaccctgagacgattgtcgctaagaagacagac ctatcagccagggtcaaaaagcaagccggcacggtcagaagacaaggtcaatcgatcaaa agtggtacagagagtgcacttgagacatcgaggagattgagggaggagaggactcaatcc agaaccaccgtagtcatcaagaactggggagagaaatgccgggactttgataggatcccg tctgtcccacaacgctacttgagggtcaagaggtacttatcaagtctttctccagaggac cagaaggctgtcggcggcgagataatgttgtacatgtgcaacatccttggcctccaactt attcgtagacccccgaaaaaggctttcagcgattcagaatcgagtacattggcaatgatc tgggcccagatcagagatatgacgtccttgcccctcaccgttgagacaaaacaccaggtc cagtatttgatgaaggctttaaagttcccgcggggtgaacttcaagacggacattccatg cccgtcaaacatcaacttccgttcgtctcgacgtatgaagtatcaagcaagcatctacaa gtccagacgactagtctcgagttccaattggctcactgtggcccttacctggagagaagc ttcgactccgcccccgacccgcgcgttactttcagtccagatgcctggcaacgaagcgtg cttgatgccatcgatcacgacaagagccttttcgtcgtcgctcccacgtccgccggaaag acctttatctcgttctacgccatgaagaagatcctgcagaacaacgatgacgacgtcctc gtctacgtagccccaaccaaagcactcgtcaaccagattgccgcggaagttcaggctcgg ttctccaagtcttatcgtcatgagggccgttcggtttgggccattcacactcgagactac cgcgtcaacaaccccaccggctgtcaggttttggtgaccgttccgcacatcctccagatc atgcttctggcgcccaccaacgcgcagaatgagagatcctgggctcgcagagttaagaga attatctttgacgaagtgcactgcattggccaggccgaagacggcataatttgggagcaa ctgttgcttcttgctccttgtcccatcatcgccctatctgctacagtgggcaatccgctt gagttcaaagagtggctcgcaggaacccagaagaccaagggctttgaacttgaaatgata gttcactcggccagatactctgacttgcgaaagtttctgtatcagcccccctctacgctg aattttgaaggactagagccagtggagcgtttgccaatccccggtttggatgctgaagca ggagaaacctcgtgtttcacgtttgtgcatccagtcggaagcattatcaccaagaaccgc gagactcttgacgatgccagtctcgagccccgcgactgtctccgactttggctgaccatg aaggaatctgaaaacgaatcatttcgtatcagtcccagcctcaagcccgagattgcgttg ccagagttggtgaagaagtcggatatcatcaagtgggaggctgctctcaaagcacagctc tggcaatggcaacaggatcccaagtcgccctttccagaagtatacaagaggctcaagata aatggcccttcatcagcgatagaccttgagaggcccgaggtcgtcgcagacatctatggt gactcttcgttctcactcctcgttgatctccgctcccggggtgccctgccagctatcctt ttcaattacgaccggcttggatgcgagaaggtaattctcaagcttcttcaagtccttgaa gatgctgaacaaaagcatcgagatacaagtacagagtgggcgcggaagatggactcatat caaaaatggcgaaaagtcaaggatagcaaagctgcgaagaaaggagcaaaagcgactaga gcaactggggctgcaaagtccaaggaggagagacacgacgcaaaggattctggtgcagcc ctgaatcaagctgatcttgtgagggaggacgcaggccgggaaaccagcccgtgggaaagt ttcgatcccggggcgccgcttccgcagtacaatttcgcggacactactaaactcacagct gaggacttagaggcccgcattaggtctctagatgatttgggcatcaagcctcgcttaatc gacgctcttcgccggggactcggtgtccaccatgccggtatgaaccggcagtaccgccaa gttgtggaaatgttgttccgtaagggctacttgacggtcgttgttgcgaccggtactctc gctctcgggttgaatatgccttgcaaaactgttgtctttataggtgactcggcattcctc acggctctcaactaccggcaggcatcaggacgtgctggacgtcgtgggttcgacctcctt ggtaacgtcgtctttcatggcatccctcatcatcgtgccatggagatcatctcttcgcgg ttgcccgatctcagaggccaattccccatttccgtcactttgattcttcggctctttatc ctgctgcacagcacgaacaactcccagtatgccattgatgcagtggagtccttgttgact caaacacgtctgtttctcggtggacctgcctcgcagatgaccgtcaagcaccacgtgcgc ttttccatcgagtacctccggcgacagcaccttctctctcgaacaggagcccccctcaac ttctcgggcctggtgggccacttgtacttcactgagaacgctgtgtttgctctgcactct ctgctcaaggaaggctacttgcacaagctctgtgaggactttagcaacccacggaagcaa ggagagatcatcctcaatttgttgacagtattgtgtcatctcttctgccgcattccttgc agaaagtacaacaaccgggaatggctcgaaaacgtcgtacatcgatcgccttccgttgtc cttctacctagactgccgcttgaggccgaaaccgtcctccgaaatcacaacaaggagact ctaaggattttcaaggcttacgttcacaacttcattgcacaaaatctccaggactctcca gatgaccagcttcctttcacgaagcgccgcgtgggcgccgtcggggaaacctcagatgat atctcaacggcgcagattccgatacttccttatccgactcttcgatcccctttcgctgcg ctgtcaggcttcacagatgactttgatacaatccacgatctatgcaacacaattcgcagt ggtgtgttccttgacgaatctgctatcccgtacatccccatttaccctgaagagacaaat ggcgtgccctggaacgcctacatctatgacttttacaagcacggtgatctcaacactctc gtgcgggacaacggaatcaagggcggcgatgtatggttccgcctgaaagacttctcattg atattggccaccatcgtaacaagcttggagaacatcctaggtcgagccaatgctgatgac tcggacatgatcaatgttcgagatgttggcgacaccatcgaagaggagagactcagagag gaatcggaagcaaaattctcggattaccctgcaacctcatctgctactgcgaacgcaaag acaaagttccgctctagcagatctaaagaagcggtggttgaatcatgggaagatgtgtcg gatggctcctcggaggatacccatcacccgagtagcaacgcaagcagagcctttcaggca accgagtcagaaggaacgtctttcgggtcagatcgggaaaagggaggcggtgatggtctt gtgaaagttcacatggctttcaggctcctgcagcaggttttcgaagacaagttcaggaag gtgtgggcatga

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