KEGG   Cellulomonas flavigena: Cfla_1903Help
Entry
Cfla_1903         CDS       T01230                                 

Definition
(GenBank) DNA polymerase LigD, ligase domain protein
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
cfl  Cellulomonas flavigena
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cfl00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    Cfla_1903
Enzymes [BR:cfl01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Cfla_1903
DNA repair and recombination proteins [BR:cfl03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Cfla_1903
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
2117371..2118306
Genome map
AA seq 311 aa AA seqDB search
MEPMLATPAPARAALPHGPGWVFEVKWDGVRVLADAHDDSVRLSSRNERDVTSAYPELRG
LAALGDVLLDGEVVLMEAGRPSFTALAERMHVRDTRRAAALAAARPVTYLVFDVLRHDGL
DLTALPLSERRAVLDGLVLPAHVQASPWYDDGDDLWRVTAGHGLEGVVAKRRDAPYRPGR
RSPDWVKAAHRRARTAVVGGWRPESTGTGRLGAVLLGAPDAAGGLRYLCRAGSGLGGPAA
REMRALLAPLERATSPFRDDVPAVDARGTVWCDPVVVVEALYLARTPTGRLRQPVVRGVR
TDTTADPWEQP
NT seq 936 nt NT seq  +upstreamnt  +downstreamnt
gtggagcccatgctcgccacccctgcgcctgcccgtgcggcgcttccgcacggcccgggc
tgggtgttcgaggtcaagtgggacggggtgcgggtgctcgcggacgcccacgacgacagc
gtgcgcctgagcagccgcaacgagcgggacgtcacgtcggcgtaccccgagctgcgcggt
ctggcggcgctcggcgacgtgctgctcgacggcgaggtcgtgctcatggaggccggccgg
ccgtcgttcacggcgctcgcggagcggatgcacgtgcgcgacacccggcgcgcggcggcc
ctggcggcggcccgtccggtgacctatctggtgttcgacgtgctgcggcacgacggactc
gacctcaccgcgttgccgctgtcggagcgacgcgcggtgctcgacggcctcgtgctgccg
gcgcacgtgcaggcgtcaccctggtacgacgacggcgacgacctgtggcgcgtcacggcg
ggacacgggctcgagggcgtcgtggccaagcgacgcgacgcgccgtaccgacccggacgg
cgctcgcccgactgggtgaaggcggcccaccgccgagcccgcacggcggtcgtcggcggg
tggcgaccggagtcgaccggtacgggccggctgggggccgtgctgctgggcgcacccgac
gcggccggcgggctgcgctacctgtgccgcgcgggttccgggctcggcggccccgccgcg
cgggagatgcgcgccctgctcgcgccgctcgagcgtgccacgagcccgttccgcgacgac
gtccccgccgtcgacgcgcgcggcacggtgtggtgcgaccccgtcgtggtcgtcgaggcg
ctgtacctggcgcgcaccccgacaggccggctgcgccagccggtcgtgcgaggggtccgc
accgacaccaccgccgacccctgggagcagccgtga

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