KEGG   Camponotus floridanus (Florida carpenter ant): 105249105
Entry
105249105         CDS       T03919                                 
Name
(RefSeq) DNA ligase 3 isoform X1
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
cfo  Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cfo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    105249105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cfo03400]
    105249105
Enzymes [BR:cfo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     105249105
DNA repair and recombination proteins [BR:cfo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     105249105
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N zf-PARP DNA_ligase_A_C RNA_ligase BRCT DUF2695
Other DBs
NCBI-GeneID: 105249105
NCBI-ProteinID: XP_011252631
LinkDB
Position
Unknown
AA seq 991 aa
MSSDVEEEESQQGEEKPFAVERAKTGRAKCKRCKCVIEKGEIRIGKYVTSFFADGKLMPA
WHHVTCLFDAFAKQRATTKRIDDPAEDVKGWELLSDDDKTVILNKLEEFEKSCPTKISKK
TTSPRKTAPSSSTTSEKTMEKKKKGTVTDDKEKDKKEGEKISSKDDSFREFRRVCNNIAN
ADAYTDKTAIIKRMFTKGAQGDGFKGDIVLWCKLLLPGAVKRIYNLQSKQLIKLFARLLL
QDEDAMLEHLEQGDVAETISMFFENSVSVSPCTASVLTIQDVDLFLESLSHLTKEEEQIQ
HFRSILDRCTSNDLKMIVRLIKHDLRINAGPKHILEGVHVDAYRAFQMSRDLEAVIRRFL
PDSEEKPSDTLGSPSSRNKVVISLMTPVLPMLAEACTSVEMAMRKCPNGMLSEVKYDGER
VQVHKSGNDFRYFSRSLKPVLPHKVNLFKDYIARAFPDGDDLILDSEVLMVDNETGQPLP
FGTLGIHKKAEFKNANVCLFVFDCLYYNGEILINKSMLERRRILMDRMTEIPNRIMLSEV
HEVHNPRVLAERIVHVLKLGLEGLVLKDIDSKYEPGKRHWLKVKKDYLCGGAMADSADLV
VLGAWYGTGNKGGMLSIFLMGCYDEERDKWLTVTKVHTGHDDTTLTALQDELDMVKIGKD
VDKLPSWLLAKKPMVPDFVARDPKEQKQPVWEITGAEFTNQGVHTADGISIRFPRVTRIR
HDKDWSTATSLNELRGLFKKKPDSVDFSHLLGTLADVKDTEKKSPRKRSPDSATSPRKVE
KKARKVTSSLDEPSTSFKEMSEESFEKRKRDKRDEGSDNIADVQPRKKKLKVSKIEAKVK
RDVAEETQQNRDVDYYLTERMDAEGSSESSSALDPDDEDTESNTILQDVRATFAPGFDKG
RRKDACRMLKKLGATIVTLENRPVSTATHVIHTRTEIPSTAVLVDFTNFPRTTKHVNVSW
LEESATRSAKQDEIYHAVQLIGDYCDCSCAH
NT seq 2976 nt   +upstreamnt  +downstreamnt
atgtcaagcgacgtcgaggaggaagagtcgcagcagggggaagagaaaccgttcgccgtc
gaacgcgcgaagaccggccgcgcgaaatgcaagagatgcaagtgcgtgatcgagaagggc
gagatacggattggcaagtacgtgacgagcttcttcgcggatggaaaactgatgccggcc
tggcaccatgtcacctgtctgttcgacgcgttcgccaaacagcgcgcgacgaccaagagg
atcgatgatcctgcggaggatgtgaagggttgggaattattgtccgacgacgacaagacg
gtcatcctgaataagctggaggaattcgagaaatcttgtcctacaaagatttcgaaaaag
accacatcgccacgaaaaacggctccttcctcaagtactacttcggaaaaaacgatggaa
aagaaaaagaaaggaactgtaacggatgacaaggagaaagataagaaagaaggggaaaag
atctcatcaaaagatgactcctttcgcgaatttcgacgcgtatgcaacaatatcgccaat
gccgacgcctacactgacaagactgcgattattaagaggatgttcacgaaaggagcacag
ggagacggttttaagggtgacatcgtgctctggtgcaaattgttgctgcccggcgctgta
aagagaatctacaatctgcagagtaagcagctgataaagttgttcgcacgattattgctg
caggacgaggacgcgatgttggaacatctggagcaaggtgacgtggctgagacaatcagc
atgttcttcgagaacagcgtctctgtgtcgccttgtaccgcgagcgtattgacgatccaa
gatgttgatctttttttggaaagtttgtcacatttaaccaaggaggaggaacagatccag
cattttcgatccatcctcgatagatgtacctccaacgacctcaaaatgatcgtacgtctg
atcaagcacgatctgaggatcaacgccggtccgaagcacattctcgagggagtccacgtg
gacgcgtatagggctttccagatgtcccgagatttggaagcggtgatacgtcgttttctg
cccgactcggaggaaaaaccttcggacacgttgggctcgccatccagtcggaataaagta
gtcatttcactgatgacgccggttttaccgatgctggcagaggcatgcacatccgtggaa
atggcgatgcgaaagtgcccgaacggaatgttatccgaggtcaaatacgacggcgagcgc
gtacaggtgcacaaaagcggaaacgactttcgatacttcagtagatccctcaaaccggtc
ttgccgcacaaggtgaatctgttcaaggattatatagcgcgggcatttcccgatggggac
gatttaattctcgattccgaggttctcatggtcgacaacgagacagggcaacccttgcct
ttcggcaccttaggaatacacaaaaaagccgaatttaaaaacgccaatgtgtgcctcttt
gttttcgattgtctatactacaatggagagatacttataaacaagtctatgttggagcgc
agaaggatcctgatggataggatgaccgagataccgaatagaataatgctatcagaggtt
cacgaagtccataatccgcgggttttggcggaaagaattgtgcacgtgttgaaattaggt
ctcgagggtttagttctaaaggacatcgatagcaaatacgagccaggcaagagacattgg
ttgaaggtaaagaaggactatttatgcgggggtgcaatggctgatagcgcagacctcgtc
gtgcttggcgcatggtacggcacaggcaataaaggtggcatgttgtcaatctttttaatg
ggctgctacgacgaggagcgtgataaatggttgactgtgaccaaagtccacacgggacat
gacgatactaccctaacggcgcttcaagatgagctcgacatggtgaagatcggcaaggat
gttgacaaactgccgagttggttgcttgccaaaaaacccatggtaccggattttgtggcg
agagatcccaaggaacagaaacagccagtgtgggaaattacgggggccgagtttacgaat
cagggggtacataccgcggacggtattagcatccggtttccgcgtgtcacgcgaattcgt
cacgacaaggattggtccacggccactagtttgaacgagttgcgcggactcttcaagaag
aagccggattccgtcgactttagtcatctactcggaacattggccgatgtcaaggatact
gagaagaaatctccgagaaaaagatctcccgactcggctacgtcaccgagaaaagttgag
aagaaggcgaggaaggtaacgagctcactggacgagccgtcaacgagtttcaaggaaatg
tcggaagaatctttcgagaaacggaaaagggataaacgcgacgaaggatccgacaatatt
gcagatgttcagccgcggaaaaagaaattgaaagtatcgaagatcgaagcgaaagtcaaa
agagacgtggcagaggaaacgcaacagaatcgtgacgttgattattatcttaccgaaaga
atggacgcagaaggatcttccgagtcctcgagcgcccttgatccagacgacgaggatacc
gaatcgaacactatcctgcaagacgtgcgagcgacttttgcgccaggctttgataagggt
aggaggaaggacgcatgcaggatgctcaaaaaacttggcgctacgatagtaacgttggaa
aatagaccagtctcgacggcaacccacgtcatccacacgcgcacggaaattccgtccacg
gccgttctcgtggatttcactaattttccaaggaccaccaagcacgtgaacgtgtcctgg
ttggaggagtctgcaacgcgatccgcgaagcaggacgaaatctatcacgcagtacagctg
atcggggattactgcgattgttcttgcgcacattga

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