Camponotus floridanus (Florida carpenter ant): 105249732
Help
Entry
105249732 CDS
T03919
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cfo01009
]
105249732
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfo03019
]
105249732
04131 Membrane trafficking [BR:
cfo04131
]
105249732
03036 Chromosome and associated proteins [BR:
cfo03036
]
105249732
Enzymes [BR:
cfo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
105249732
Protein phosphatases and associated proteins [BR:
cfo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105249732
Messenger RNA biogenesis [BR:
cfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
105249732
Membrane trafficking [BR:
cfo04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
105249732
Chromosome and associated proteins [BR:
cfo03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
105249732
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Rotamase_2
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
105249732
NCBI-ProteinID:
XP_025261716
LinkDB
All DBs
Position
Unknown
AA seq
1173 aa
AA seq
DB search
MTEPIVRSDLFTAAKQLADSEIELIKVIESSSKCQRSTTNMFESVKKTKKPGKSKNVVRP
SAALLAAKREAAQRQLLLNKKSNNSFIRDVYQNAIDAYKIVRKETGLVFDRSMAEHECLW
DPNYPECPARFTRVLQRCEELNLVQRCKRVESRLATENEILTKHSQKQIDILKATDGCAD
SENLELLSSKYDAVFVHPSTYKLSLLAVGSTINLVESICKGEIQNGMAIIRPPGHHAMKS
EYCGYCFFNNVAIAVEKALSSNLANRILIVDWDVHHGQATQQMFYNDPRVVYFSIHRYEY
GEFWPNLKESDFHYIGEDLGEGYNFNIPLNKTGMTNADYIAIFQQVLLPMAYEFQPDLII
VSAGYDAALGCPEGEMLITPACYSHLLSSLLSLAAGKVAVILEGGYCLKSLAEGAALTLR
TLLGDPCPILQTLDLPSSSIRDTILNVIYAHKPYWKCYQYQEMHSINSITHNKEEIANRH
VVMVTYKGNDFKPDKYETRNCYPKQSKEVLEVIDKKLNELILLTRLHKAPHKVCIVYDEK
MQKHCNISDNIHPEKPSRISSIYNNHEKYGLLERCHLLQGRSATLAELSLAHSKDYIDSI
KRTSTLKPKELQKQASDYNSVYLHNETWSSACVSAGCLLKMVDAVLNGESQSGIAIVRPP
GHHAEEDNACGFCIFNNVAIAAQYAVQFHHLKRVLIVDWDVHHGNGTQSIFEEDPKILYI
SVHRYDNGSFFPNSKRANYTSVGLNAGEGFNVNIPWNKKGMGDAEYIAVFQQVVMPIAYQ
FNPELILVSAGFDACVGDPLGGCLVSPELYGHLIHWLSSLANGRIILSLEGGYNINSISH
AMTMCTKALLGDPLPMLDSGLIPCSSAVNSINNVLKTHKKFWPNLQYGMSLPKEKLLPKL
KKTLNKLDEQGRITEKPKQTESKIALEVIESEKLELNLAIDKNRLNLVTDEEILKLTNEV
ENIKIKNSELRPTRSATDETRRNSGLKKSEMKKLDASQSIQKCVNETNQSKDNQQGGSRI
PEDRDDEGAASLQRETQSTTLLEYLSDNLQALTAGEMFAVVPLRDCPHLFTVNEVPPSGI
DVTLPCMECASTAENWICLQCYTVHCARSINQHAMQHAEECEHPITLSFSDISVWCYGCE
AYIDNPRLYAARNAAHQSKFNEELPWTYNENDI
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgactgagcctatagtgaggtcagatttgttcactgctgctaaacaattagcagacagt
gaaattgaactaataaaagtaatcgaaagttccagcaagtgccaaagatctactacaaat
atgtttgagagtgttaagaaaacaaagaagcctggaaaatcaaaaaatgtagttcgtcca
tcagctgcactgttggctgccaaacgagaggcagctcaacgacagctgctgttgaataaa
aaatccaacaatagtttcatacgagatgtatatcaaaatgcaattgacgcgtacaaaata
gtacgaaaggagactggtcttgtatttgatcgaagcatggcagagcatgaatgcctctgg
gatccaaattatcctgaatgtccggctagatttacacgagttttgcaaagatgtgaagaa
ctgaatttggtgcaaagatgtaagcgcgtcgaatcaagattggctacagaaaatgagatc
ctgacaaagcacagtcagaaacaaattgatatcttgaaggcaacagatggctgtgcagat
tctgagaatttggaattgctttcttccaaatatgatgctgtctttgttcatccatctaca
tataaattatctttactagctgtgggctcaacaatcaatttagtggaaagtatctgtaaa
ggcgaaattcaaaatggtatggctatcattaggccaccgggtcatcatgccatgaaatca
gagtactgtggttactgctttttcaacaatgtggctattgcagtagagaaagctttgagc
tctaatttggcgaatagaattttaattgtggattgggatgttcatcatggacaagcaacg
caacaaatgttttacaatgatccacgtgtagtctatttttctatacatcgttatgaatat
ggagaattctggcccaatctaaaggaatctgactttcattatattggagaggatcttgga
gagggttataactttaatatacccttaaataagactggtatgactaatgctgattacatc
gcgatcttccaacaagttttattgccaatggcttacgaatttcaaccagatcttataata
gtatcagctggttatgatgcagctctaggttgtccagagggagagatgttaataactcca
gcgtgttattctcatttactatcatcgttattaagtctggcagctggaaaagtcgccgta
attttagagggtggttattgcttgaaatctttagcagaaggtgcagcattgactttaaga
actttattgggtgatccatgccctattttacaaacacttgacttgccatcatcaagtata
cgtgacactattctgaatgtaatctatgcacacaaaccatattggaaatgttatcaatac
caagaaatgcatagtatcaatagcataacacataacaaggaggaaattgctaatagacat
gtagttatggttacatacaaaggcaacgattttaaaccagataaatatgaaactcgaaat
tgctatcctaaacaaagcaaagaagttttggaagtcatcgataaaaaattaaatgaattg
atattacttacaaggttacataaggcgcctcacaaagtgtgtatcgtttatgatgaaaaa
atgcagaagcattgcaatatctctgacaatatccatccagagaaaccatctcgcatctct
agcatttataataatcatgaaaagtatggcctgttggaacggtgtcatttgctgcaagga
aggagtgcgacactagcagaattatccttggctcattcaaaggattacattgatagtatc
aaaaggacttcgactttaaaacctaaggaattgcagaagcaagcgtcggattataattcc
gtttatcttcacaatgaaacgtggtcaagtgcctgcgtgtctgccggctgccttttaaaa
atggtggacgcggttttaaatggagaaagtcaatccggaatagccattgtgagaccacca
ggacatcatgctgaggaagataatgcatgcggtttttgtatctttaacaatgtggctata
gctgcgcaatatgccgtacagtttcatcatttaaagagagtgttaatagtggattgggac
gtgcatcatggtaatgggacgcaatccatctttgaagaagatcccaaaattctttatatt
tctgtacatcgttatgataatgggagctttttcccaaattccaagcgagctaattatacg
agcgttggcttaaacgcaggcgaaggattcaatgtaaacataccgtggaacaaaaaagga
atgggagacgctgaatacatagcagtttttcagcaagtcgtgatgcccattgcttatcag
tttaatccagaactgattttggtttctgctggatttgatgcttgtgtgggtgatccactc
ggaggttgcctggtaagtccggagctctatggccatttgatccattggctttcgtccctg
gccaacggccgcataatcctcagtcttgaaggaggctacaacatcaactccatttctcat
gcgatgaccatgtgcaccaaggctctcttgggcgatccgctgcccatgctggattccggt
ttgatcccctgctctagcgcagttaattccatcaataacgtgttgaaaactcacaagaaa
ttctggcctaatctgcaatatggaatgtccttgccgaaggaaaaactgctccccaaactc
aagaaaactctgaacaagcttgacgaacaaggaagaatcacagaaaagccaaaacaaacg
gaatcgaaaattgctttagaagtaatcgaaagtgagaaattggaattgaacttggcgatc
gataagaatcgtttgaacctggtgacggatgaagaaattctaaagttgacaaatgaagtg
gagaatattaaaattaagaactctgaattgcgtccgacgagaagcgcaacggatgagact
aggagaaattctggattgaaaaagagcgaaatgaaaaaattggatgcttcgcagagtata
cagaaatgcgtaaacgaaacgaatcaatcgaaagacaatcaacaaggaggttctcgtata
cccgaggatcgcgatgacgaaggcgcagcatctctacaacgtgaaacacaatcgacgact
cttctagagtatctctccgataatcttcaggctctgacagcgggagaaatgttcgcggtg
gtacctctgcgagattgtccgcacttatttacagtcaacgaagttcctcccagtggaatt
gatgtaactttaccttgcatggagtgcgccagcaccgcggagaattggatctgcttacaa
tgttacaccgtacattgcgctcgcagtatcaatcaacacgcaatgcaacacgcagaggaa
tgcgagcatcccatcacgctcagtttcagcgacatctccgtttggtgctatggttgcgaa
gcttatattgataatcctagattatacgcggcaagaaacgcagctcatcaaagcaaattc
aatgaagagcttccctggacttataacgaaaatgacatataa
DBGET
integrated database retrieval system
