Collimonas fungivorans: CFU_3940
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Entry
CFU_3940 CDS
T01583
Symbol
ddlB
Name
(GenBank) D-alanine-D-alanine ligase B, affects cell division
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
cfu
Collimonas fungivorans
Pathway
cfu00470
D-Amino acid metabolism
cfu00550
Peptidoglycan biosynthesis
cfu01100
Metabolic pathways
cfu01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CFU_3940 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CFU_3940 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CFU_3940 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cfu01011
]
CFU_3940 (ddlB)
Enzymes [BR:
cfu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CFU_3940 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
cfu01011
]
Precursor biosynthesis
Amino acid ligase
CFU_3940 (ddlB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp
CPSase_L_D2
ATPgrasp_ST
TTL
RimK
GARS_A
Motif
Other DBs
NCBI-ProteinID:
AEK63763
UniProt:
G0AF36
LinkDB
All DBs
Position
complement(4622963..4623973)
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AA seq
336 aa
AA seq
DB search
MNTAMSETMSKKKTGHQFGKVGVLFGGRSAEREVSIMSGNGVLKALKSHGVDAHLFDTRE
RSLAELAAEKFDRVFIALHGRYGEDGTLQGALEQLGIPYTGPGVMASAIGMDKVMTKRIW
QSMGLPTPRFIVLDSHSATREELRQVPDVLGLPLMLKAPHEGSTIGISKVVGYSDMSEGF
ALCAKFDEKVLAEEFVAGRELTVPVLGAGRRARTLPIVEIRAPEGNYDYQHKYFTDDTKY
LCPAPLDEALTQRIQALAVQAFNALGCEGWARVDFMLRSSDNEPYLLEINTSPGMTSHSL
VPMAAKADGVSYEDLCVEILKSASLDLKPSADWKPD
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaatacagcgatgagtgaaacgatgagcaaaaaaaagacaggtcatcaattcggcaaa
gtcggcgtgctgttcggcggccgttcggccgagcgcgaagtttccatcatgtccggcaac
ggcgtgctgaaggcattgaaaagccatggcgtcgacgcccatctgtttgatacgcgcgag
cgcagcctggccgaactggcggcggagaaattcgatcgcgtgttcatcgccctgcatggc
cgttacggcgaagacggaactttgcaaggcgcgctggagcagctcggcatcccttatacc
gggccgggcgtgatggcgtcggcgataggcatggataaggtcatgaccaagcgcatctgg
caaagcatgggtctgccgacgccgcgttttatcgtactggattcgcacagtgcaacccgc
gaagaactgcgccaggtgccggacgtgctgggtttgccattgatgctgaaagcgccgcat
gaaggatcgactatcggcatcagcaaggtggtcggctattcggacatgagcgaaggtttt
gccttgtgcgccaaattcgatgaaaaagtgctggcggaagaattcgtcgccggccgcgag
ctgacggtgccggtgctcggcgccggccgccgtgcgcggactttgcctatcgtcgagatt
cgcgcgccggaaggcaattacgactatcagcataaatattttaccgacgacaccaagtat
ctgtgtccggcgcccttggatgaggcgctgacgcagcgcatacaggcgctggcggtgcag
gctttcaatgcactgggatgcgaaggctgggcgcgggtcgatttcatgctgcgctcttcc
gacaacgaaccgtacctgctggagatcaacacttcgccaggcatgactagccattcgctg
gtgccgatggcggccaaggcggacggtgtgagctacgaagacctgtgtgtggaaatactg
aagtcggcctcgctggacctgaagccgtcggcagactggaagccggactga
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