Cystobacter fuscus: CYFUS_007318
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Entry
CYFUS_007318 CDS
T05065
Name
(GenBank) helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cfus
Cystobacter fuscus
Pathway
cfus03420
Nucleotide excision repair
cfus03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CYFUS_007318
03430 Mismatch repair
CYFUS_007318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfus03400
]
CYFUS_007318
Enzymes [BR:
cfus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CYFUS_007318
DNA repair and recombination proteins [BR:
cfus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CYFUS_007318
MMR (mismatch excision repair)
Other MMR factors
CYFUS_007318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ATB41842
UniProt:
A0A250JEC4
LinkDB
All DBs
Position
complement(9153934..9156054)
Genome browser
AA seq
706 aa
AA seq
DB search
MDLSKLNAPQREAVVTTEGPLLVLAGAGSGKTRVITHRIVHLLDKRPNGLLARNILAVTF
TNKAAAEMKERLVHMAGPRAQNVLVCTFHAFGAEMLREDIHRLGWPKKFSIADQGDQAAI
IKRAMRERRIDDRTFDARKVLGLISKAKNAGKVPEPLGEGMGDDYDLIAHMVYEAYQLGL
KAQGSVDFDDLLILPSRLLREHEDLRQKYTSRFRYILVDEFQDTNQAQLDLLKLLVSGET
RNVCAVGDDDQCIYSWRGAEVRNILSYDKYFPGGKEVRLEQNYRSTQVVLDAANAVIAQN
PERKAKQMWSERKGGARIQVVTAPTEEEEARYVAQEISRLVAGGIPPDEIAVLYRVNGQS
RPVEEMLREKGLRYEVLSGSEFFDRREVKDVVAYFKLIANPRDETSLLRIINVPARGIGD
VTMERLVAHARRDSVTLWGAMERAEGYEDLPAGAGAKVTEFIKLVERYRESYEHGKLAQV
TRQLLEEIGYRDDAKSLTTSQAAAERKLQSIDFVLNSLEAFEKREGPKASLLTYLNRLSL
DTRQEEEEVPGANKAITLMTLHASKGLEYRVVFFIGMEEELMPHKGMQGEAQNLEEERRL
CYVGITRAKEMLYLTRSAMRVKRGKEVPRTPSRFLEDIPESLVEVVDLDAPRKGPPTAEE
KNFFANLKERFKAPGAGGGGAPRPASPAGGAPGAGDPAPGTARVVR
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggacctctcgaagctcaatgccccgcagcgtgaagccgtggtcaccaccgagggcccc
ctcctggtgctggccggagcgggaagcgggaagacccgcgtcatcacccaccgcatcgtc
cacctgctcgacaagcggcccaatgggctgctcgcccgcaacatcctcgcggtgaccttc
accaacaaggccgccgcggagatgaaggagcgcctggtccacatggccgggccccgggcg
cagaacgtgctcgtgtgcaccttccatgccttcggcgcggagatgctgcgcgaggacatc
caccggctgggctggcccaagaagttctccatcgcggaccagggagaccaggcggccatc
atcaagcgcgccatgcgcgagcggcgcatcgatgatcgcacgttcgatgcgcgcaaggtg
ctgggcctcatctccaaggcgaagaacgcgggcaaggtgcccgagccgctgggggagggg
atgggggacgactacgatctcatcgcccacatggtctacgaggcgtaccagctcgggctc
aaggcccagggctcggtggacttcgacgatctgctcatcctgccctcgcggctgctgcgc
gagcacgaggatctgcgccagaagtacacctcgcgcttccgctacatcctggtggacgag
ttccaggacaccaaccaggcgcagttggacctgctcaagctgctggtgagcggggagacg
cgcaacgtgtgcgcggtgggcgacgacgaccagtgcatctacagctggcgcggcgccgag
gtgcgcaacatcctgagctacgacaagtacttcccgggcgggaaggaagtgcggctcgag
cagaactaccgctccacgcaggtggtgctggacgcggccaacgccgtcatcgcgcagaac
cccgagcgcaaggccaagcagatgtggagcgagcgcaagggcggcgcgcgcatccaggtg
gtgacggcgcccacggaggaggaagaggcgcgctacgtggcgcaggagatctcccggctc
gtcgccgggggcattcccccggatgagatcgccgtgctctaccgggtcaacggccagtcg
cgtcccgtcgaggagatgctgcgcgagaagggcctacgctacgaggtgctctcgggcagc
gagttcttcgatcggcgcgaggtgaaggacgtcgtcgcctacttcaagctcatcgccaac
ccgcgcgacgagacgtcgctcctgcgcatcatcaacgtgccggcgcgaggcatcggcgac
gtcaccatggagcggctggtggctcacgcgcgacgcgacagcgtgacgctctggggcgcc
atggagcgcgcggagggctacgaggatctgcccgcgggcgcgggagccaaggtcacggag
ttcatcaagctcgtcgagcgctaccgcgagagctacgagcacggcaagctcgcccaggtg
acgcgccagctcctggaggagatcggctaccgggacgacgccaagtcgctgacgacctcg
caggcggcggcggagcgcaagctgcagtccatcgacttcgtcctcaactcgctcgaggcc
ttcgagaagcgcgagggccccaaggcgagcctgctcacctacctcaaccggctgagcctc
gacacccgccaggaagaggaggaggtgcccggcgccaacaaggccatcaccctgatgacc
ctccatgcctccaagggtctggagtaccgggtggtcttcttcatcggcatggaggaggag
ctcatgccccacaagggcatgcagggcgaggcccagaacctcgaggaggaacgtcggctc
tgctacgtgggcatcacccgggccaaggagatgctctacctcacgcgctccgccatgcgc
gtcaagcgcggcaaggaggtaccccgcaccccctcgcgcttcctggaggacatccccgag
tccctcgtggaggtggtggatcttgacgcaccgcgcaagggcccgcccaccgccgaggag
aagaacttcttcgccaacctcaaggagcgcttcaaggcgccgggggcgggcgggggaggg
gcccctcggccggcgtctcccgcggggggggcgccgggagcgggcgaccctgctccggga
acggcgcgcgtggtgcgctga
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