Cricetulus griseus (Chinese hamster): 100763340
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Entry
100763340 CDS
T02813
Symbol
Rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge04140
Autophagy - animal
cge04211
Longevity regulating pathway
cge05010
Alzheimer disease
cge05014
Amyotrophic lateral sclerosis
cge05016
Huntington disease
cge05017
Spinocerebellar ataxia
cge05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100763340 (Rb1cc1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
100763340 (Rb1cc1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100763340 (Rb1cc1)
05014 Amyotrophic lateral sclerosis
100763340 (Rb1cc1)
05016 Huntington disease
100763340 (Rb1cc1)
05017 Spinocerebellar ataxia
100763340 (Rb1cc1)
05022 Pathways of neurodegeneration - multiple diseases
100763340 (Rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cge01009
]
100763340 (Rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cge04131
]
100763340 (Rb1cc1)
03029 Mitochondrial biogenesis [BR:
cge03029
]
100763340 (Rb1cc1)
Protein phosphatases and associated proteins [BR:
cge01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100763340 (Rb1cc1)
Membrane trafficking [BR:
cge04131
]
Autophagy
Autophagosome formation proteins
ULK complex
100763340 (Rb1cc1)
Mitochondrial biogenesis [BR:
cge03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100763340 (Rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
100763340
NCBI-ProteinID:
XP_027254741
UniProt:
A0A8C2LRY8
LinkDB
All DBs
Position
2:159241496..159308959
Genome browser
AA seq
1588 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIQSKYKIAIQHQVLVVNGGECMAADRRVC
TYSAGTDTNPIFLFNKEMILCDRAPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSDYLQ
SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRMDSLNEHEGSEKAEMKRPTEL
VLSPDMPRTTNTSLLTSFHKSVEHVAPDPTDAERGKELRESCQSTVQEEEASVDAKDSDL
PFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPKIIQPFILECHQTIAKLDNQNMKA
IKGLEDRLYALDQMIASCGRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLM
IMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLE
RVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKQLYEAEKSKRESFGKL
FRKSFLRNRLFKGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPL
LCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLNEQKVSTSQASPQSAASPRIESTTT
TSPKTPSPLTVQDPLCPAVCPLEELSPDSIDAHTFDFETISHPNTEQTIHQASLDLDSLA
ESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTSARGK
EGFGDYAALHVQLEKCRVAVQDSHVSIQNIKEDLCHLRTFVQKEQCDLSDSLKCTAVELR
NIIEKVKCSLEITLMEKHQKELQSLKSEYECKLDALVKDSEENVNKIKKLKGDLVSLEEA
LQKKDSEFAVIKHEKEAVVCMQHEKDQKLLEMENILHTQNCEIKELKQSREMVLEDMKKL
HVENDKKIESLRAEFQCLEQSHLKELEDTMNVRHTHEFEKVMTDHKVSLEQLKKENQQRI
DQILDSHASTIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKIVLEESRTQQ
KETLKSLLDQETENLRTEISKLNQKIHDNNENYQVGLSELIALMTIEKDQCISELISRHE
EESNTLKAELDNVTSLHHQAFETEKNLKEQIVELQNKLDEELSVLERQKDEKITRQEEKY
EALIQNLEKDKEKLVINHEQDKEQLIQKLNCEKEEAVQTALNKFKLERELVEKELLEKVK
HLEIQIAKSTTAFESAREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMHNVRTSL
IAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEEKKK
LEEEVSKLRTSSFIPSAPVLTAPELYGACAPELPGETERSAMETTDEGRVDSAMEISMMS
VQENTISEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGDL
VLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGASRRPWVLGKVMEKEYCQ
AKKAQNRFKVPLGTKFYRVKAVSWNKKV
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtgtttctggttaacactgggaccactctgacttttgatactgagcta
actgtgcaaactgtggctgaccttaagcatgccattcaaagcaaatacaagattgctatt
cagcaccaagtgctggtggtcaatggaggagaatgcatggctgcagatcggagagtgtgt
acctacagcgccggaacggacacaaatccaatttttctttttaataaagaaatgatccta
tgtgaccgtgcacctgctattcccaaaactaccttttcaacagaaaatgatatggaaata
aaagttgaggagtcccttatgatgcctgcagtttttcacactgttgcttcaaggacacaa
cttgcagtggaaatgtatgaagttgccaagaagctttgctctttctgtgaagggcttgtc
catgatgaacatcttcaacaccaaggctgggctgcaatcatggctaatctggaggactgt
tcaaattcataccagaagcttcttttcaagtttgaaagtatttattcagattatctgcaa
tccatagaagacatcaagttaaaacttactcatttaggaactgcggtttcagtgatggcc
aagattccactgttggagtgcctaaccagacatagttacagggaatgtttgggaagaatg
gattctttaaatgaacatgaaggctcagagaaagctgagatgaaaagacccactgaactg
gtgctctctcctgatatgcctagaacaactaacacatccttgttaacctcatttcacaag
tcagtggagcatgtagctccagatcccaccgatgctgaacgtggcaaagaacttagggaa
tcttgtcaaagtactgtccaggaagaagaagcttcagtagatgctaaagacagtgatctg
cctttttttaatgtttccttgttagactggataaatgttcaagatagacctaatgacgtg
gaatctttggtcaggaagtgctttgattctatgagcaggcttgacccaaagattattcaa
ccatttatcttagaatgccatcaaactattgccaaacttgataatcagaatatgaaagcc
attaaagggcttgaagatcggctgtatgccctggaccagatgattgctagctgtggccgg
ctggtaaatgaacagaaagagcttgctcagggatttttagctaatcagatgagagctgaa
aacttgaaggatgcatctgtattacctgatctgtgcctgagtcatgcaaatcagctaatg
attatgttacaaaaccacagaaaattgttggatattaaacagaagtgtaccactgccaaa
caagagctagcaaacaatctacatgtcagactgaagtggtgttgttttgtgatgcttcat
gcggatcaagatggagaaaaactgcaagctctgctccgccttgtaatagagttgttagaa
agagtcaaaattgttgaggctcttagcacagttcctcagatgtattgcctagctgttgtt
gaggttgtaaggagaaaaatgttcattaaacactacagagagtgggctggtgctttagtc
aaagatgggaagcaattatatgaagctgaaaagtcaaaaagggaatcctttgggaaatta
tttaggaaatcctttttaagaaaccgcctgtttaagggactggactcctggcccccctca
ttttgtactcagaagcctcgaaaatttgactgtgaacttccagacatatcattaaaagat
ttacagtttcttcaatcattttgtccttcagaagtacagccgttcctcagggttccctta
ctttgtgactttgaacctctacaccagcatgtacttgccctacataatttggtaaaagca
gcacaaagtttggatgaaatgtcacagaccattacagatctgctgaatgaacaaaaggtg
tccacaagtcaggcatccccacagtcagctgcttctccaaggatagaaagtacaactact
acctcaccaaaaactccttctcctctaactgttcaggatcccttatgtccagcagtgtgt
cccttagaagaattgtctccagatagcattgatgctcatacgtttgattttgaaaccatc
tcccatccaaacacagaacaaactattcaccaagcttcattagacttggattcattagca
gaaagtcctgaatctgattttatgtctgctgtgaatgagtttgtgattgaagaaaattta
tcctctccaaatcctataagtgatccacaaagtccagaaatgatggtggagtcactttat
tcatcagtcatcaatgcaatagatagtagacgcatgcaggacactagtgcacgtggaaaa
gaggggtttggagattatgctgctctgcatgtccagctggagaaatgcagagttgctgtc
caagactctcacgtcagcatacaaaatatcaaggaagatctgtgccatcttagaacattt
gtacaaaaagaacagtgtgacttatcagattctttaaaatgtacagcagtagaactaaga
aacattattgaaaaagtaaaatgctccctagaaataacactaatggaaaaacatcagaaa
gaactccaatctttaaaaagtgagtatgaatgtaaacttgatgctctagtaaaagacagt
gaagaaaatgtaaataaaattaaaaagttgaaaggagatttagtatcccttgaggaggct
ttgcaaaagaaggacagtgaatttgctgtgataaaacatgaaaaggaagctgtcgtctgc
atgcagcatgaaaaggatcaaaagttgttagagatggaaaatattctgcatactcaaaat
tgtgaaattaaagagctaaagcagtcacgagagatggtgttagaagacatgaaaaagctg
catgttgaaaatgataagaaaatagagtcactgagagccgaatttcaatgcttagagcaa
agccacctaaaggaattagaggatacaatgaatgtcaggcacacacatgagtttgagaaa
gttatgacagatcacaaagtgtctttggagcaattaaaaaaagaaaatcaacaaagaatt
gaccagatactagattcgcatgcctcaactatccaggaaaaagaacaacagttgcaggaa
ttgaaactcaaggtttctgatttgtcagacatgaggtgtaaattagaggttgaacttgca
ttaaaggaagcagaaactgatgagataaagattgtgttggaagagagcagaacacagcaa
aaggaaactttgaagtctctccttgaccaagagacagaaaacttaagaacagaaataagt
aaactgaaccaaaagattcatgataataatgagaattatcaggtgggcttatcagagtta
atagctttaatgacaattgaaaaagatcagtgcatttcagagttaattagtagacatgaa
gaggaatctaatacactgaaggctgaattagacaatgtaacatctttgcatcaccaagca
tttgaaacggaaaaaaacctgaaagaacaaatagttgaactgcagaacaaattggacgaa
gaactgagtgtgcttgaaagacaaaaagatgaaaaaataacccggcaagaagagaagtat
gaggctcttatccagaaccttgagaaagacaaggagaaattggtcataaaccatgaacaa
gacaaagaacagttaattcagaagcttaattgtgaaaaagaagaagctgttcaaactgca
ctaaataaatttaagttggagagagaacttgttgaaaaagagttattagaaaaagttaaa
catcttgagattcaaatagccaaaagtactactgcctttgaatcagccagagaagattcg
tcaagcctagttgctgaacttcaagagaagcttcaggaagaaaaagctaaatttctagaa
cagcttgaagaacaagaaaaaagaaagaatgaagaaatgcacaatgtccgaacatctttg
attgctgaacaacagaccaattttaacactgttttaacgagagagaaaatgaggaaggaa
aacataataaatgatcttagtgataagttaaaaagtacaatgcaacaacaagagcgtgac
aaagatttgatagagtcactttctgaagaccgagctcgtttgcttgaagagaagaaaaag
cttgaagaagaagtgagtaaacttcgcactagcagttttatcccctcggcacctgtgctt
acagccccagagctgtatggagcctgtgcacctgaactgccaggggagacggagagatca
gccatggagacaacagatgaaggaagagtggactcagcaatggagataagcatgatgtct
gtccaagaaaatacgatatctgaagagaaacagaggatcatgcttctagaacggacattg
cagttgaaagaagaagaaaacaagcggttaaatcaaagactgatgtctcagagcatgtcc
tcagtatcttcaaggcattctgaaaaaatagccattcgagattttcaggtgggagatttg
gttctcatcatcctagatgagcgacatgacaattatgtgttgtttactgttagccctact
ttgtattttctgcattcagagtctcttcctgccctggatctcaaaccaggtgagggagct
tcaggtgcatctagaagaccctgggtccttggaaaagtaatggaaaaggaatattgtcaa
gccaaaaaggcacaaaacagatttaaagttcctttgggaacaaagttttacagagtgaaa
gctgtgtcatggaataagaaagtatag
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integrated database retrieval system
