Clostridium gelidum: psyc5s11_37470
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Entry
psyc5s11_37470 CDS
T08447
Symbol
hemD
Name
(GenBank) uroporphyrinogen-III C-methyltransferase
KO
K13542
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
cgel
Clostridium gelidum
Pathway
cgel00860
Porphyrin metabolism
cgel01100
Metabolic pathways
cgel01110
Biosynthesis of secondary metabolites
cgel01120
Microbial metabolism in diverse environments
cgel01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
cgel00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
psyc5s11_37470 (hemD)
Enzymes [BR:
cgel01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
psyc5s11_37470 (hemD)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
psyc5s11_37470 (hemD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
HEM4
MEDS
BRCT
DUF1947
Ribosomal_S13_N
Motif
Other DBs
NCBI-ProteinID:
BCZ47680
LinkDB
All DBs
Position
complement(4079926..4081392)
Genome browser
AA seq
488 aa
AA seq
DB search
MSKVYIIGTGPGDEELLTLKAVRVLKECTAVLYDRLVSNNVLNYLNENCEIYYCGKEPGA
HSKTQEEINELIVSLAKKGHIVGRIKGGDPYVFGRGGEEVLALAKENISFEVIPGVTSPI
AVLNYAGIPITHRGIAQSFHVVTGKSAQDLNVNFKALAAEEGTLVFMMGLSNLDNIVREL
IDNGKDSSTPCGVVMRGTSAKQKKVIGTLDNISQKVMDAKLKSPCIIVVGEVVSLSESLN
WYESKPLFGKNICITRSKKQSENLKNRLVELGAEVTSFNSIEIKGSTNNLYSYINKLGDY
DHMVFTSVNSVDIFFDYLIEKDYDIRGIKAKISAIGHATAKALNKRGIICFAKAKEFASE
GLISILKPHLKENEKLLLPCSAKSRQYIYEELTKTGVEVDKVYLYDTVCGTVANKKSFDE
VDIVFFTSPSTVKNMVDMVGLEEIKKKQVISIGPKTNESLKEFGIEATVCKEHSEDGFLK
EIMNLLKN
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggtatatataataggaacaggtccaggagatgaagaattattgacattaaag
gctgttagggttttaaaagaatgcacagcggtattatatgatagattagtttcaaataat
gtattaaattatttgaatgaaaattgtgaaatttattattgtggtaaagagccgggggct
cattctaaaacacaagaggaaattaatgaacttatagttagtctcgcaaaaaaaggtcat
atagttggaagaattaaaggtggagatccttatgtgtttggaagaggcggagaagaagta
cttgctttagctaaggaaaacatatcttttgaggtaattccgggagtaacatctccaata
gcagttttaaattatgctggaattccaataactcatagaggcatagcacaaagttttcat
gttgtaacaggtaaatctgcacaagatttgaatgtgaattttaaagctttagctgctgaa
gaaggaactttagtttttatgatgggtttaagtaatttagataatatagttagagagctt
atagataatggaaaagattcatctacgccatgtggtgttgtaatgaggggaacctcagcc
aaacaaaaaaaggttataggaactttagataatatttcacaaaaagtaatggatgcaaaa
ctaaaatcaccgtgtataattgtggttggagaagttgtaagcttaagtgaaagcttaaac
tggtatgaaagtaagccgttatttggaaaaaatatatgtattacaagatctaaaaaacaa
tctgagaatttaaaaaatagattagttgaattaggagcagaggttacaagctttaattca
atagaaataaaaggtagtacaaataatttatacagttatataaataaattaggagactat
gatcatatggtatttacgtctgtaaatagtgtagatatattttttgattatctaattgaa
aaagattatgatataagaggaattaaagcaaaaatttctgctattgggcatgcaacagca
aaagctttaaataaaagaggaattatatgttttgcaaaagctaaggaatttgcttcagaa
ggtttaataagcatattgaaaccacatttgaaagaaaacgaaaaattacttttgccatgc
tcagctaagagtagacaatatatatatgaggaacttacaaaaactggtgtagaagtagat
aaagtatatttatatgatacagtttgcggaactgtagcaaataaaaaatcttttgatgaa
gtagatatagtattttttacaagcccatcaacagttaaaaatatggtggatatggtaggc
ttagaagaaattaaaaagaaacaagttatatctataggaccaaagactaatgaatcatta
aaggaatttggaatagaagcaacagtatgtaaagagcattcggaggatggatttttaaag
gaaataatgaatttattaaagaattaa
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