Cryptococcus gattii: CGB_C1050W
Help
Entry
CGB_C1050W CDS
T02232
Name
(RefSeq) RNA helicase
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
cgi
Cryptococcus gattii
Pathway
cgi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGB_C1050W
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgi03019
]
CGB_C1050W
03036 Chromosome and associated proteins [BR:
cgi03036
]
CGB_C1050W
Enzymes [BR:
cgi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CGB_C1050W
Messenger RNA biogenesis [BR:
cgi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
CGB_C1050W
mRNA degradation factors
5'-3' decay
Decapping complex
CGB_C1050W
Chromosome and associated proteins [BR:
cgi03036
]
Eukaryotic type
Gene silencing
piRNA pathway
CGB_C1050W
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
10187117
NCBI-ProteinID:
XP_003192576
UniProt:
E6R2Q5
LinkDB
All DBs
Position
C:join(216392..216408,216455..216521,216573..216720,216770..216795,216844..217269,217316..217444,217492..217815,217866..218576)
Genome browser
AA seq
615 aa
AA seq
DB search
MASSSTLPNDDWKQGLTAPPKDLRPQTEDVTATQGSRFEDFGLRRELLMGIYTAGFERPS
PIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQT
SQVCKTLGAHIPNLQVMITTGGTTLRDDILRLQQPVHILVGTPGRILDLGSKGIAGLNKC
SIFVMDEADKLLSEDFMPVIEQTLALCPQERQVMLFSATFPWTVKEFKDQHMVQPYEINL
MDELTLKGVTQYYAYVEESQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKVTELGYS
CFYSHAKMQQAHRNRVFHDFRNGMTRNLVCSDLLTRGIDIQAVNVVINFDFPRTAESYLH
RIGRSGRFGHLGLAISLLTLEDRHNLYRIESELGTEIAPIPAVIDPVLYVAPAMVEEERE
SPPPRPAAIAAPPTQQQSQQRQRQHPPVPSHQAAQYTPDATPVQQQQQHQQQSPQYQQAY
GQIPPQPQAPFQQRPNSSPIPASLPSYPQQNPTEAQGPPQVQSPPSVPGIQPMAPAQTPP
QGQIPPTQPRAQQQGQQQPGQPGQAQGQGQSNRRPNNGGFRGNMRGQGQRGRGRGRGGQV
GQPSAGAGQSQQAQA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcctcaacgttgccgaatgacgactggaaacagggtcttactgcccctcct
aaagaccttcgtccacaaactgaggacgttaccgctactcaaggatctcgtttcgaagat
tttggcttacgtcgagaacttttgatgggtatctacactgctggttttgaaaggcctagt
cctatccaggagcaggctattcctatggcccttacaggacgagatattcttgctcgagcg
aagaacggtactggaaagaccgcttcttttattattcctacccttaaccgaattaacact
tctttatctcatatccaagcacttatccttgttcccacccgagaactcgcccttcaaacg
tctcaagtctgcaaaacccttggtgcccacatccctaacctccaagtcatgattaccacc
ggtggtaccacattacgtgacgatatccttcgtcttcaacagcctgtccacattctcgtc
ggtacacctggtcgtatcttagatttgggaagcaaaggaattgcgggtttgaacaagtgc
agtatctttgttatggatgaagcggacaagcttctcagtgaagatttcatgcctgtcatt
gagcagactttagccctgtgccctcaagagagacaggttatgctgttctctgcaactttc
ccatggaccgtcaaggaattcaaggaccaacacatggttcaaccatacgaaatcaatctc
atggacgaacttactcttaaaggtgtcactcaatattacgcctatgtcgaagaatctcag
aaagttcattgccttaacaccctcttttccaagctccaaatcaaccaatctatcatcttt
tgtaactccaccaatcgtgtagagctcctcgccaaaaaggtcactgaacttggctattct
tgtttttactcccacgcaaagatgcagcaagcccacagaaaccgagttttccacgacttc
cgtaacggcatgactcgaaacttggtctgttccgacttgttgacaagaggtattgatatc
caggccgtaaatgtcgtcatcaactttgacttcccaaggactgccgaatcatatcttcac
agaattggtcgatcgggtcgttttggtcacttgggtcttgccatttctcttctcactctt
gaagatagacataatttataccgtatcgaatccgaacttggcacagaaattgcccctatt
cccgctgtcatcgatcccgttctctatgtcgctcccgccatggtggaggaagaacgagaa
tcaccgcctcctaggcccgctgccattgccgctcctcccactcagcaacaatctcaacaa
cgacaacgacaacacccccctgtgccctcccaccaagctgctcagtacacccctgatgcc
acgcctgtccagcagcagcaacaacaccaacaacaatcacctcaataccaacaggcatat
ggccagatcccaccccagcctcaagctcctttccaacagcggcccaactcttctcccatc
cccgcttctttgccttcttatccccaacagaatccgacggaggcccagggtcccccgcaa
gtacaatccccgccttctgtgcctggtatccagcccatggcccctgcccaaaccccccct
caaggccaaatccctccaactcagcctcgagctcagcaacaaggccaacaacaacccggt
caaccaggccaagcacagggtcagggtcaatctaacagacggccgaataatggtggcttt
aggggtaacatgcgaggtcaaggacagagaggacgaggtaggggaagaggtggacaggtt
ggtcagcctagtgccggtgcgggccagagccaacaggctcaagcctaa
DBGET
integrated database retrieval system
