Cryptococcus gattii: CGB_C6500C
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Entry
CGB_C6500C CDS
T02232
Name
(RefSeq) ATP-dependent DNA helicase hus2/rqh1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
cgi
Cryptococcus gattii
Pathway
cgi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CGB_C6500C
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgi03032
]
CGB_C6500C
03400 DNA repair and recombination proteins [BR:
cgi03400
]
CGB_C6500C
Enzymes [BR:
cgi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CGB_C6500C
DNA replication proteins [BR:
cgi03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
CGB_C6500C
DNA repair and recombination proteins [BR:
cgi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
CGB_C6500C
Bloom's syndrome complex (BTR)
CGB_C6500C
FA (Fanconi anemia) pathway
CGB_C6500C
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
RecQ_Zn_bind
HRDC
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
10187767
NCBI-ProteinID:
XP_003192966
UniProt:
E6R1S7
LinkDB
All DBs
Position
C:complement(join(1295626..1295887,1295944..1296086,1296145..1296194,1296250..1296325,1296387..1296854,1296939..1297421,1297500..1297595,1297796..1298547,1298601..1299424,1299621..1299622))
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AA seq
1051 aa
AA seq
DB search
MAELKPPSLAVKNYPTPTTASSSKVKLATPDHWNSSRSNGVPSDESDMPVARVLLQRNRT
YPSPTVAGPSRPTSRRPSPLHDVPEDLHDFDIAMAEKDFHGLDEEPVIVPPSTPPAASPP
RIAVRTSTRQPQPLLAPEAIFQDTGHLPDEFHDIPFSEIFSSPTSPTRNLPNAPLRVESS
PPKPIDLPRPSAIAGPSRQPMETHSPIKETVPAVPQHRVIPLEITHPWSKEVNQKLRQVF
KLPNFRKHQKEAIDETMAGKDVFVLMPTGGGKSLTYQLPAVCSSGKTRGVTFVVSPLISL
INDQTRHLISRGIPAIAYTGDLTQKDKNVAHEELSKREPITKVVYVTPEMMSMGGHIKSI
LRGLLQRKQLARFVIDEAHCVSQWGHDFRADYLRLGELRRDYPGVPIMALTATAQNKVQE
DIIRSLRIEGCVCLRQSFNRPNLHYEVRPKTSAVIQEIVAFVRTQEARASGIVYCNSRDN
CENLAKKLREEHGLRAYHYHAGMTKENRRKMQEGWQDHKFEIMVATTLSITICLDRLKGI
IKKLVERGVTAIHRPASYKILGQIDQEKDLTRDQKERQKASMQEVLRYCNNKVDCRRSQV
LAFFNETFDAANCNQGCDVCLGRDRNVFRTEDVTEDAVTVIKMVQAFSNIKITILNAAEC
FRGYKGNSGKRLDQNPYFGAGQSWERNEGERLIQTLVIEGALEEYCVESKAGWTNAYLRV
GKEGYKYLNGTARLKMDFREASPRKSTTKSKQPSKRQSAKSKSQTTLGKTTSSNPIARKR
SLQQIMAEEAEFDNSHWGDTDDEYHPEEDGDPIIASADETEVDDGVPQKRRKSTEASKEK
TPRSTRSKAKAATPDGGVESSVEQCLKALEKMRNQSTARNKTYPVLTDELLQMVAALMPA
NEKRLREIEGMTPQLIEAYSTKILGICIKFRPANQNTLNTTASVVHKDVPRAAVVPAPVT
LPRANSTTMHRIKQYAYEPSSAPKSPITSAVRRPSSTSSLKRQTLLFSTPSNVAGSGNTV
TPTAAKRQSNVGTVRPVLTARGGNVVRKDKF
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctcaaacccccatcattagctgttaaaaattatcctactcccacaactgcc
agttcatcgaaagtcaagctcgcaacgccggaccattggaattccagtcggtctaatgga
gtaccgagtgatgagtctgatatgcccgtagccagagtccttttacagcgcaatcggaca
tatccgtctccgactgttgctggaccgtcgagacctacatctaggcgaccaagtccactg
catgatgttccagaggatcttcacgactttgatatagctatggctgaaaaagatttccac
ggtcttgacgaagagcccgttattgtccccccatctaccccgcctgccgcttctcctcct
cgcatagccgttagaacgtctacacggcaaccgcaacccttactggcccccgaagcgatt
ttccaagatacgggacatcttccagatgaattccatgatattcctttcagcgaaatattt
tcttcacccacatcaccaactcgcaatcttcctaatgccccgcttcgcgtcgaatcttct
cctcctaaacctatagatctgccccgtccctcagccatagcaggaccttcgagacagcct
atggaaacgcattctccaatcaaggaaaccgtcccagcggtacctcaacatagggtcatc
ccactcgaaataactcatccatggtcaaaggaagtcaatcagaagttaagacaggtgttc
aaactgcccaattttaggaaacatcagaaagaagccatcgacgagaccatggccggtaaa
gacgtattcgtgcttatgcctactggaggaggaaaaagtttgacctatcaacttcccgca
gtctgctcttcgggcaaaactcgcggtgtcacatttgtggtttctcctcttatttcactc
atcaatgatcaaacaagacatttgatctctaggggcattcccgctatagcgtacactggc
gatcttactcaaaaagacaagaatgtggcgcatgaagaattgtcgaaaagggaacctatc
acaaaagtggtctatgtgactccggaaatgatgtcgatgggcggtcatatcaagtcgata
ctgcgcggtttgctgcagaggaagcaactggcaaggtttgtgattgacgaggcacattgc
gtgagtcaatggggtcatgattttcgagccgactacctacgtcttggtgagcttcgtcga
gactatccaggcgtgccaatcatggctctcactgctactgctcaaaataaggtacaagaa
gacatcattcgttctctccgtattgagggatgcgtttgtttgcgccagtctttcaaccgc
cccaatcttcattatgaggttcgtcccaaaaccagcgcagtgatacaagagattgtggcc
tttgtccgtacacaagaagcccgggcaagtggtatcgtatactgcaattcaagagacaat
tgcgaaaatttggcgaagaaattaagagaggagcatggcctgcgagcgtatcattatcat
gcgggaatgacgaaggagaatcggagaaagatgcaagaaggttggcaagaccataaattt
gagatcatggttgctactacgttatccatcaccatttgcctagatcgcttgaagggtatt
atcaagaaactggtagagcggggcgtgacggcaatccatcgacctgcatcctataagatc
ctcggacagattgaccaagaaaaggatctcacccgcgatcaaaaggagcgacaaaaggca
agtatgcaagaggtccttcgttattgtaacaacaaggtcgattgtcgtcgctcccaagtg
ctcgcctttttcaatgaaacttttgacgctgccaactgcaatcaaggatgcgacgtctgc
ctcggccgggatcggaatgtcttcaggacagaggatgtgacagaggatgcggtaacggtc
atcaaaatggtccaggcattcagcaacattaaaattacaatcctgaatgccgccgaatgc
tttagaggctataaaggtaattcaggcaagcggttagatcaaaatccgtacttcggcgcc
ggacaatcttgggagagaaacgagggagaaaggctgatccagacacttgtcattgaaggg
gctctggaggaatactgcgttgagtcgaaggccggatggaccaatgcgtacttgagagtg
ggcaaagagggctacaaatacttgaatggtactgctagactcaagatggatttccgtgag
gcgtctcctcgcaagtcgacaacgaaatccaagcagccctccaagcgccaatcggctaaa
tccaagagccagacaacgcttgggaaaacaaccagttctaatcccattgcgcggaagcgt
tcgctgcagcaaatcatggcggaggaggcagagtttgataattcacattggggtgacacc
gatgatgaatatcatcctgaagaagatggtgaccctattatagcaagtgcagatgagaca
gaagtggacgatggcgtaccgcagaagagaagaaagtcaacagaagccagcaaggaaaag
acaccaagaagtactaggtcaaaagcaaaggcagccactcctgatggtggcgtcgaaagt
tcagtggagcagtgtttaaaggctttagagaaaatgcgcaatcagtcgaccgccaggaac
aagacttatccagtcctgacggatgagttgcttcaaatggtagcggcactgatgcctgcc
aacgagaaacggcttcgagagatcgagggaatgactcctcaactcattgaggcatactct
accaagatcttgggcatctgcataaagttccgacctgccaatcagaatacattaaacaca
actgctagtgtcgtccataaagatgttcctcgcgcagctgtggtgcctgcccctgtcact
ctacctcgggcaaactctacgactatgcaccggatcaaacagtatgcgtacgaaccttct
tcggcgcccaaaagccccattacctccgccgttcggagaccctcgagcacaagttctctt
aagcggcaaaccctgcttttttctacgccatcaaatgttgctggtagcggcaacaccgtc
actcccacagctgccaaacggcagagcaatgttggtactgtccgcccagtgttgacggcg
agaggtggtaatgttgttaggaaagacaagttttga
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