KEGG   Cryptococcus gattii: CGB_H3700W
Entry
CGB_H3700W        CDS       T02232                                 
Name
(RefSeq) DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
cgi  Cryptococcus gattii
Pathway
cgi03030  DNA replication
cgi03410  Base excision repair
cgi03420  Nucleotide excision repair
cgi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cgi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CGB_H3700W
   03410 Base excision repair
    CGB_H3700W
   03420 Nucleotide excision repair
    CGB_H3700W
   03430 Mismatch repair
    CGB_H3700W
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cgi03032]
    CGB_H3700W
   03400 DNA repair and recombination proteins [BR:cgi03400]
    CGB_H3700W
Enzymes [BR:cgi01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CGB_H3700W
    6.5.1.6  DNA ligase (ATP or NAD+)
     CGB_H3700W
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     CGB_H3700W
DNA replication proteins [BR:cgi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    CGB_H3700W
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     CGB_H3700W
DNA repair and recombination proteins [BR:cgi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     CGB_H3700W
   NER (nucleotide excision repair)
    Other NER factors
     CGB_H3700W
   MMR (mismatch excision repair)
    Other MMR factors
     CGB_H3700W
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase FAS_N
Other DBs
NCBI-GeneID: 10185600
NCBI-ProteinID: XP_003195763
UniProt: E6RB09
LinkDB
Position
H:join(811250..811256,811304..811441,811499..811814,811866..811934,811985..812156,812215..812355,812411..812512,812565..812727,812778..812853,812912..812997,813058..813269,813327..813509,813565..813795,813852..814199,814250..814417)
AA seq 803 aa
MSDTDSPVKANVRKKRTVILSDDEDEGLSPPVTKKQLSSPRHSHASDEETEPPRKIAKTS
SKVAPIFAPKEKREKPPSKASSTSPKAPTKKTEVKNKDEKPLASIFTKSVRKPEPKDDDE
VSDEVKQKGKDEEEEDEVYDEIEDKQEGEAAVKLASIFTKNQKSVPVADKGWKDGEAVPY
SALVSTFEKIEATTKRLEILELLTQFLLVVAKRDTATDTKGSMLLKVVYLCINRLCPDYM
GIELGIGESLLVKAIAESTGRAMPKIKEDLKKEGDLGKVATNSRNTQSTMFKPKPLTVPY
VFQCLTEIAKATGNASQAKKVGIIKKLLAACQSTEAKFIIRSLEGKLRIGLADKTVVVAL
AHAIVLKTIGDKKPSPEKLAIMLEQGAETVKAVYSELPSYDLVIPALLQDGVEGLRKHCK
LTPGVPLKPMLAKPTKAITEVLDRFEGKEFTCEYKYDGERAQVHLLEDGTISVFSRNSEN
MSAKYPDLIDQIPRALKPTAKTFVIDAEAVAYDLETKKILPFQDLSRRKRKDVKAEDITV
RVHIFAFDLLYLNGESLLAKELKERRRLLQEHFQPVESEFAFAKSSDGSTSEEIQAFLEE
SVKDGCEGLMVKMLTSEASTYEPSRRSMNWLKLKKDYLSGVGDSLDLVVVGAYHGKGKRT
AVYGAFLLACYDPDSEHYQTICKIGTGFSEEILTKFYELLKPLELGVVRGDIEVGGAKPD
VWFEPRVVWEVLTADLSLSPVYAAAHGVIDSRGISLRFPRFIRIRDDKSADEATTAEQVC
EFYQRQVSASGKKGAGPDVDDFW
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgagtgatacagactctccagtgaaggctaacgtcaggaagaagcgaacggttatcctg
tcggatgacgaggacgaaggacttagcccacctgtgaccaaaaagcagctttcgtctccc
agacattctcatgcatctgatgaggagacggagcctccccgtaaaattgcaaaaacatca
tccaaagtggcgcctatcttcgctccaaaagagaagagagaaaaaccgccctccaaggcc
tcatccacttcgcctaaagcacccaccaagaagacggaagtaaagaacaaggatgaaaaa
ccacttgcatcaatattcacaaaatcggtacgaaagcctgagcctaaggatgacgacgag
gtatccgatgaggtgaaacaaaaggggaaagatgaagaagaggaggatgaggtatatgat
gagattgaggataagcaggaaggagaggccgctgtcaaactggcttcgatctttaccaag
aaccagaagtctgtccccgttgctgacaagggctggaaagacggtgaagcggtcccctat
tccgctctcgtgtcaacctttgaaaaaattgaggctactactaagcggttagaaattctc
gaacttttaacccagtttttgctcgttgtcgccaagagagatacggccacagatactaaa
gggtctatgcttctcaaagtggtctatctttgtatcaacaggctatgccccgactatatg
ggtatcgagctcggtattggggaatcattattggtcaaggccattgcagagagcacaggg
cgggccatgcccaagatcaaagaagatttaaagaaggaaggagatctcgggaaggtcgcc
acgaactctagaaacactcaatcaaccatgttcaagcccaaacctctgacagtaccatat
gtcttccaatgtctcactgagattgcaaaggctaccgggaacgcgtctcaagcgaagaaa
gtaggcatcattaaaaaactacttgctgcctgccagagcaccgaggcgaaattcatcatc
cgatctcttgaaggaaagttacgaatcggtcttgccgacaaaacggtcgtggttgccttg
gcccacgctatcgttctgaagaccattggtgacaaaaagccctcgcctgagaaacttgct
attatgctggaacagggcgctgaaactgttaaagctgtctatagtgaacttccttcatat
gacttagtaattcctgctcttctccaagatggcgtagaaggtttgaggaaacattgcaaa
cttactccaggcgtccctctcaaacctatgcttgccaagccgacgaaagccatcacagag
gttcttgaccgtttcgaaggcaaggaattcacttgcgagtacaagtatgatggagagcgt
gcgcaggtccacctgttggaagatggtactatttctgtgttcagcagaaattcagaaaac
atgagtgccaagtatcctgatctgatagatcaaataccgagggctttgaaacccactgcc
aagacgtttgtcatcgatgccgaagcggttgcttatgacttggaaaccaagaagattctg
cccttccaggatctcagtaggcgaaagcgaaaggacgtcaaggccgaagacatcacagtg
cgagtacatatctttgcgttcgatttgctctatctgaatggagagagtctcctcgctaaa
gagctcaaagaaagacgacgactcttacaagagcacttccaacctgtggaatcggagttt
gcctttgccaagtcatcagatggcagcacgtcagaagaaattcaggcgttcctcgaggaa
agtgtgaaggatgggtgtgagggtctgatggtgaagatgctcactagtgaggcatcaacg
tatgagcccagtagaagaagcatgaattggctcaagctcaagaaagactacctttcaggt
gttggagactctctcgatcttgttgtcgtaggggcatatcatggcaaaggcaaacgtact
gcagtctatggtgctttcctcctcgcatgctatgaccccgattcggagcattaccagact
atctgcaagatcggtaccggtttctccgaagaaatcctcacaaaattctacgaattactt
aaacctttagaattgggagtcgtgagaggagatatagaggttggaggagccaagccggat
gtatggtttgagcccagagtggtctgggaggtcttgacggccgatttgagtttaagtccg
gtttatgcggcggcgcatggtgtaatcgattcgcgaggaatctcgctccgtttccctcga
tttatcaggatcagagacgacaaatccgctgacgaagccacaacagctgagcaggtctgc
gaattctatcaacgtcaggtttcggcaagtggcaagaaaggagcggggccggatgtggat
gacttctggtaa

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