KEGG   Cryptococcus gattii: CGB_K3320W
Entry
CGB_K3320W        CDS       T02232                                 
Name
(RefSeq) DNA ligase (ATP)
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
cgi  Cryptococcus gattii
Pathway
cgi03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cgi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    CGB_K3320W
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cgi03400]
    CGB_K3320W
Enzymes [BR:cgi01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CGB_K3320W
DNA repair and recombination proteins [BR:cgi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     CGB_K3320W
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N BRCT_2 BRCT RNA_ligase LIG3_BRCT RTT107_BRCT_5 Neuralized
Other DBs
NCBI-GeneID: 10185288
NCBI-ProteinID: XP_003196756
UniProt: E6RDT0
LinkDB
Position
K:join(711355..711630,711689..711820,711877..712013,712072..712157,712207..712343,712396..712600,712654..712732,712788..712873,712923..712958,713009..713207,713271..713376,713430..713537,713612..713671,713733..713814,713863..713887,713941..713984,714034..714127,714234..714332,714384..714417,714475..714559,714613..714741,714801..714903,714962..715352,715407..715517,715570..715620,715676..715770,715824..715961,716015..716091,716144..716160)
AA seq 1073 aa
MAVHAPYYHAPPPTQEINGEKPTLTAATTLERPADCINRGQYPAFYIICGYLNRLRADAP
HKKYELLMRIFGNWREKVGPDLYPLIRLLLPDKDRERPVYNLKESMLARCYIDILSLEKH
SEAAQRLIKWKQPAEGSSNPTGDFAKVCYNEIKARSTVEEGQLSVEAVNMLLDKLAVGKM
KQAEYVPILKAINMQCTAEEQEWIIRIILKDLHISIRERGVLSAFHPDAIDLYNICSDLK
RVCWTLYDPGFRLNKNETHLELFHSFVPQLCGRMNDTSLENIAKAIGAPKEFIMEEKLDG
ERIQLHMRGNGAQWFYCSRKAKDYTYLYGAHPGEGSLTRYIANAFQDNVRNIILDGEMMV
WDPVVERYLAFGTLKSAALDHFNDETAPRPCFKVFDILFLNDHCLSRKRLSERKRLLRSG
KIFKNIEDYKGRLEFVDEKRGKSAKDIREYLERVVETKGEGLVVKKTDVIYQTNSRGYDW
IKVKPEYSDQMGENLEVLVLGGWWGKGGRSGKISRLLCGLREQAFDDGTLQDFLFNRFWN
ELFRLRVDFHKKHWKPFDRSNPPAFMKLGPVGLDDKPDVYIEPENSFVIEVKASEIVPAG
GGYGIGFTLRFPRCKYIYYDRNSRDYELDDDWDFCGTRKLTEWADFMDLFSRPKRSYDDS
QGPGKKKKRKVVRSKKNHITTNFRGQKLSNIDVETSIFSDMTFYIAKGTSEYPKADLEAL
VHKHGADFTQAQLSDLSAIVISPDQKSPLVRAQIRHGVNVIKPEWIFESIARRKALPLLK
EFLVYASEEAQEGRYYNKTLEQYDKISFVRDRTGETLFEEDGDADVEEEAMDDEDKDEID
MEEAREAKDRRMAREDLKERESNRSLEQKKLQEAWGLRSRASTGGSDSEAEEIKSLKEES
DTDSERIRRLRAIYQDEEDEENDSHESDVGVDGDGYRLVPLNELNDKEEGFMGESPEAMH
YDEDRIFYHLAFYIDTPENAAVNGLESSSPSLNAQERLAKIEKLLVEKGGRAVKSISDPK
LTHIIMDDEDSGRYVELTRKTALPKRKHIVTPKWVEDCVDEETLLDEDLYKPR
NT seq 3222 nt   +upstreamnt  +downstreamnt
atggcagtacatgctccatattatcatgcacctccgcccacgcaggaaataaatggcgag
aagccaacattaaccgcagcgacaaccctcgaacgtccagcggactgtatcaaccgcggc
cagtatcccgctttctacattatctgcggctatctgaacagattacgggcagatgctcca
cataaaaagtatgagcttctgatgaggatatttgggaactggagggagaaagtagggcca
gacctttatccgttgatcaggttgctgttacctgataaagatagggaaaggcccgtgtat
aatttgaaagagtcaatgttagctcgatgctacatcgatatattgtcgttggagaagcat
agcgaggcggctcagaggctgatcaaatggaagcaacctgcagaaggttcctcaaatcca
accggagattttgcgaaagtctgttacaatgagataaaagctcgatccaccgtggaggaa
ggtcagttgagtgttgaggcggtaaatatgcttcttgataagcttgccgttgggaaaatg
aagcaagcagaatacgtgccgatactcaaggctatcaatatgcaatgcacagctgaggaa
caagaatggattatccgcatcattctcaaagacttgcacatttcaatacgtgaacgagga
gttttatcagcgttccatcctgatgcgatagatctgtataacatctgttcagaccttaag
cgtgtctgttggactttatatgatcccggcttcaggctcaataaaaatgagacacatctt
gaattattccactcctttgtcccccaattatgtggccgcatgaatgatacgtcgcttgaa
aatattgcaaaggccattggagctccaaaagaattcatcatggaagaaaagttggacggg
gagaggatacaattacacatgagaggcaatggtgcacaatggttctattgttcaaggaaa
gctaaagactatacatatctgtatggtgcccatccaggagagggaagtttgactcgctat
atagctaatgccttccaggacaatgtaagaaatatcattcttgatggggaaatgatggtt
tgggatcctgtagtggaacgttacctggctttcggaaccctcaagtcggctgcacttgac
catttcaatgatgaaaccgccccgcgtccatgttttaaagtatttgacatacttttcttg
aacgatcattgcctttcccgcaaacgtttatcagaacgcaagcgccttcttcgttctgga
aaaattttcaagaatattgaggattacaaggggagattggaattcgtagacgaaaaaaga
gggaagagcgcaaaggacattagggagtatttggagagagtggtcgaaaccaagggcgag
ggtctagtggttaagaagacggatgtaatctatcaaacaaactcgagaggatatgactgg
atcaaggtcaagcccgagtatagtgaccaaatgggtgagaatcttgaagtcttagtgttg
ggcggatggtggggtaaaggaggacgttcagggaagatttcaagattactctgcggatta
agagagcaggcgtttgacgatggcacacttcaagactttctgttcaatcggttctggaat
gagctattcagactacgagtggattttcacaagaagcactggaagccctttgataggtcc
aatccacccgcatttatgaaacttgggccagtgggcttagacgacaagccggatgtttat
atcgaaccggagaactctttcgtcatcgaagttaaagcgtctgaaattgtgccggcaggc
ggaggctacggaataggatttactcttcgttttccacgctgcaaatacatctactacgac
aggaatagtcgagactatgagctggacgatgactgggatttttgtgggaccaggaaactc
acagaatgggcagatttcatggacctcttctcaaggcccaaaagatcatatgatgatagt
caaggtcctgggaaaaaaaagaagcgcaaggtggtcaggtctaaaaaaaaccacatcacc
accaatttccgaggtcagaagctttcaaatatagatgtggagacgagcatattcagcgat
atgacgttttatattgcaaaaggcacatctgaatacccgaaagctgatctcgaagcactt
gtgcataagcacggtgcagatttcacgcaagctcagctatccgacttatcagcaatcgtc
atctctcccgatcaaaagagccctctagtacgagcccagatccggcacggggtcaacgtc
atcaagccagaatggatatttgagagtattgcgcggaggaaagctttgcctttgttgaag
gagttcctagtctacgcgtcggaagaagctcaagaaggacgatactacaataagacactg
gagcaatatgacaagatttcttttgtacgtgatcgtaccggcgagacactcttcgaagaa
gatggtgatgccgatgtcgaagaagaggctatggatgatgaggacaaagatgagattgac
atggaagaagctcgagaagccaaggacagaaggatggccagagaagatctcaaagagaga
gaatcgaatagatcactggaacagaagaagcttcaggaagcatggggcctgagatcaaga
gcgagtacgggaggttccgatagtgaagctgaggaaattaaatcgttgaaggaggagagt
gacacagattcggaaagaattagaagactccgggccatttaccaggacgaagaggacgaa
gaaaacgacagtcatgaatcagatgttggtgtagatggagatggttacagactggtcccc
ctcaacgagttaaatgacaaggaggagggatttatgggagagagtccagaggcaatgcac
tatgatgaagatcgaattttctatcacctcgcattttacatcgatactcccgagaatgct
gcggtcaacggcttggaaagctcgtctccctctctcaacgcccaagaaagactcgccaag
atagaaaagttgttggtagagaaaggtggacgtgctgtgaaaagcatctccgatcccaag
ctcacgcacattataatggatgatgaagattcaggaagatacgtcgagttgacgaggaag
actgccctgcccaaaaggaaacacatcgtgactcccaaatgggtggaggattgcgtagat
gaagagacattgctggacgaagatttatataaaccgaggtaa

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