Carassius gibelio (silver crucian carp): 127948330
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Entry
127948330 CDS
T08819
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B-like isoform X1
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04020
Calcium signaling pathway
cgib04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
127948330
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127948330
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
127948330
Ion channels [BR:
cgib04040
]
Ligand-gated channels
Glutamate (ionotropic)
127948330
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
127948330
NCBI-ProteinID:
XP_052400710
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All DBs
Position
B1:complement(27249962..27344101)
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AA seq
1780 aa
AA seq
DB search
MGVGLAMFKGLYLHSSAMLVSLHLSSSPLSDRRVLSFVSLASSSKPPLTLSLLLLFLFFF
PTCESRRGGGIGTPIGGMSGGERGQSIISPPHYPPPGVNPVGPPLPPKFAQGLSIAVILV
GNSSEVSLSEGLEKEDFLHVPLPPKVELVTMNETDPKSIINRICALMSRNWLQGVVFGDD
TDQEAIAQILDFISAQTHIPILGIRGGSSMIMAAKDDHSMFFQFGPSIEQQASVMLNIME
EYDWYIFSIVTTYYPGYQDFVNRIRSTVENSFVGWELEEVLLLDMSVDDGDSKIQNQMKK
LQSPVILLYCTKEEAMTIFEVAHSVGLTGYGYTWIVPSLVTGDADNVPSVFPTGLISVSY
DEWDYGLEARVRDAVAIIAMATSTMMLDRGPHTLLKSGCHGTPDKKGSKSANPNEVLRYL
MNVTFEGRNLSFSEDGFQMHPKLVIILLNKERQYERVGKWENGSLAMKYHVWPRFELYSD
AGEREDDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRKQLKLQNQTGDSGIYIKRCC
KGFCIDILKKIAKTVKFTYDLYLVTNGKHGKKINGTWNGMVGEVVLKNAHMAVGSLTINE
ERSEVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFIF
EYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAF
FAVIFLASYTANLAAFMIQEEYVDQVTGLSDKKFQHPNDFSPPFRFGTVPNGSTERNIRN
NYKEMHTYMTSFHQKNVNEALHSLKMGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGYIF
ATTGYGIAIQKDSGWKRAVDLAILQLFGDGEMEELEALWLTGICHNEKNEVMSSQLDVDN
MAGVFYMLGAAMALSLITFIAEHLFYWQLRFCFMGVCSGKPGFTFSISRGIYSCIHGVQI
EENKSALNSPSATMNMNMNNTHSNILRLLRTAKNMTSVPGVNGSPRSALDYSHRESGVYD
ISEHRRSLVGHTDCKPPPYLPEDNMFSDYVSEVERTFGNLHLKDSNLYQDHYLHHHGGTG
SELALGMSGPLPNRPRSLGSASSLEGGYDCDSLGGGVAPIFTTQPRQSLTHRNREKFDLI
AGHPTQSSFKSGLPDLYGRFSFKGGASSSGFIAGHDRYCGGGGVGSGGDDGNIRSDVSDI
STHTVTYGNLEGHGKRRKQYRDSLKKRPASAKSRREQDEIELGFRRRPHHTIHHHHHHHH
PATQAHRSATPPVERKSLRGGNSTSYLFRDKENLRDFYVDQFQAKEGASPWEHLDLSDAP
GMGGGVGLGGGGCGGVVSSGGAGGACTSLVPMEDFLKGKSKKTECKGGMGGGSPGQQGHA
CWEKGIGGVGGLAGGDWECRNCHSGGVGSGGSKPVCMHGGGGAGSYPAAGGVGGTSGGSG
QISSRPSSASCKRCDSCKKPGNLYDISEDNLLLLDQTGGKHPLESGKGGGGTGAQTQVQR
RKFGPGGKVLRRQHSYDTFVELQKEGAGRMGGFGGSGGASMLPPPRSVSLKDKDRYMEGT
SPYAQMFEQYAGGERETSYFGDRGKGGGSSFSLFRGGEGGLHRRSVGERDMRDRDRGMMG
GGVGGTRGVGTYSLSKSLYPDKVNQNPFIPTFGDDQCLLHGAKSYYIKKQQAQPQQQQTP
QQPQQQQLLNNSRADFRGSMGVTSYLPASATSGVLSNVAPRFPKELCLGGPLGNHYSGGP
SNNKLLSARDGLGMGQGQRPFNGSSNGHVYEKLSSIESDV
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgggctggcaatgttcaagggactgtatcttcactcctccgccatgcttgtc
agcctccacctctcctcttcccctttatccgaccgtcgcgtcctgtcttttgtctccctg
gcttcttcctccaaaccgcccctcaccctctcgctccttcttctctttctcttcttcttc
cccacctgcgagtctcgccgtggaggcgggatcgggacgcccatcgggggcatgagcggc
ggcgagcgcggccaatcgataatcagccctcctcattatcctccaccaggagtcaatcca
gtgggtcctccattgccaccaaagtttgctcaaggccttagcattgcagtgatccttgtg
ggaaactccagcgaggtgtccctctctgaaggtctggagaaagaggacttcctccacgtg
cctctgcctccgaaagtcgaactggtcacgatgaacgaaactgaccctaagagtatcata
aaccgcatctgtgctctgatgtcccggaactggctccagggtgtggtgtttggggacgat
accgatcaggaggccattgcccagatattggacttcatctcagctcagacgcacatcccc
atcctgggcatccgtggaggctcttccatgataatggcagccaaggatgaccattccatg
ttcttccagtttggaccctctatagagcagcaggcctctgtcatgcttaacataatggag
gaatatgactggtacatattctccatcgtcaccacctactaccctggataccaggacttt
gtcaatcggatccggagtaccgtcgagaacagttttgttggctgggagctggaagaggtg
ctgctgttggacatgtcagtagatgatggtgactcaaagatccagaaccagatgaagaag
ctccaaagtcctgttatactgctgtattgcactaaagaagaagccatgaccattttcgag
gtggcgcattctgtcggcctcactggttatggttacacctggatcgtaccatctctggtg
acaggggatgcagataatgtacccagtgtctttccaacaggtttgatctctgtttcttac
gatgagtgggactatggactggaggctcgagtgcgtgatgctgtagccataatcgccatg
gcaacctccacaatgatgctggatcggggtcctcacacgctgcttaagtctggatgccac
ggcacacctgacaagaaaggcagcaagtcagcaaaccccaacgaggtgctgaggtacctc
atgaatgtgacatttgaaggacgcaacctctccttcagtgaggacggttttcagatgcac
ccaaagttggtcattatactgttaaataaggagagacagtatgaaagggtcggtaaatgg
gagaacgggtctctggcaatgaagtaccatgtgtggcctcggttcgagctctactcggat
gctggggagcgggaggatgaccacctgtccattgttacactggaggaggctccatttgtt
attgtggaggatgttgaccccctcagtggcacctgcatgaggaatacagtgccgtgccga
aaacagctcaaactccaaaatcagacaggagattcagggatctacattaaacgctgttgc
aaaggcttctgtatagacatcctcaaaaagattgccaagactgtaaaatttacctacgat
ctctacctggtgaccaatgggaagcatggcaaaaagatcaatgggacatggaatggcatg
gttggagaggtggtgttgaagaatgcccacatggcagtgggctccttgaccattaatgaa
gagaggtcagaggtcattgacttctctgtgcccttcatagagactgggattagtgtcatg
gtctctcgtagcaatggcacagtgtctccctctgcctttttagagcccttcagcgctgat
gtctgggtaatgatgttcgttatgctgttgatagtttcagccgtggctgttttcattttt
gagtacttcagtcctgttggctataatcgctgcttggcagatggacgagagcccggcggt
ccctccttcaccatcggaaaagctatttggctactttggggtttggtcttcaataactct
gtgcccgtgcagaaccccaaaggcactactagcaagatcatggtctcggtctgggccttc
ttcgctgtgattttcctggccagctacactgccaacctagctgcatttatgattcaagag
gaatatgtggaccaggtgacgggcctgagtgataaaaagtttcaacatccgaatgacttc
tcccctccattccgcttcggtactgtgcccaatggcagcacagagagaaacataaggaac
aactacaaagagatgcacacctatatgaccagcttccaccagaagaacgtaaatgaggcc
ctccacagcctcaagatgggtaaattggatgcattcatctacgacgcagcagtcttgaac
tacatggctggacgtgatgagggatgtaaactggtgaccatcggcagtggttatatcttt
gctactacagggtatggcattgccattcagaaagactcaggctggaagagagcagtggat
ctcgccattctgcagctctttggagatggtgagatggaggaacttgaggccctgtggctg
actggcatctgccacaatgagaaaaatgaggtgatgagcagtcagctggatgtagacaac
atggcaggtgtgttctacatgttgggagctgcaatggccctgtcccttatcacattcatc
gcagagcaccttttctactggcaactgcgattttgcttcatgggtgtgtgctcgggcaaa
cctggtttcaccttctccattagcaggggcatctacagttgcatccatggtgttcagatt
gaagagaacaaatcagcccttaactcaccatcagccactatgaacatgaacatgaacaac
acccactccaacattctccgtttgttgcgtactgccaaaaacatgacctctgtgcctggg
gtcaatggttcacctcgcagcgcactggactacagtcatcgtgagtcaggcgtttatgac
atcagtgaacaccggcgcagcctagtaggccacacagactgcaagcctccaccgtacctg
ccagaggacaacatgttcagcgactatgttagcgaggtggagaggacttttgggaatttg
cacctgaaggacagcaacctctaccaggatcattacctacaccaccatgggggcacggga
tctgaactggctcttggtatgtcgggtcccctgcctaaccgacctcgtagcttagggagt
gccagttcattggagggggggtacgattgtgacagcttagggggtggggtagcacccatc
ttcaccacccagccaaggcagtcgctgacacatcggaacagggaaaagtttgaccttatt
gcaggtcacccaacccagtcaagcttcaagtccggcctgccagatctatatggaaggttc
tctttcaagggtggggcatcaagttcagggtttattgcaggacatgacaggtactgcggg
ggaggtggggtgggatcaggtggggacgacggaaacattcgatctgacgtgtccgatatt
tccactcacactgtgacctacggaaaccttgagggtcacggcaaacggcgcaagcagtac
agggacagcctaaaaaagagacctgcgtctgccaagtctcgccgtgagcaggatgagatt
gagcttggcttcaggagacgtccccaccacacaatccatcaccatcaccaccaccatcat
ccagcaacacaagcacaccgctcagccaccccacctgtggagcgcaagagcctgagaggt
ggtaacagcacctcctatctattcagagacaaagagaatttgagggacttctatgtggac
cagtttcaagccaaggaaggggcatccccatgggagcatttggatttaagtgatgctcca
ggaatgggtggaggagtgggactgggtggaggcggttgcggtggagtagttagtagcggt
ggtgcagggggagcgtgcactagtttggttcccatggaagatttcctgaaaggtaaatcc
aagaagacagaatgtaagggtggaatgggaggaggatcgcctgggcaacagggccatgca
tgctgggaaaagggcatcggaggggtgggggggttggctggaggggattgggaatgtcgc
aattgccacagtggaggggttggaagtggaggaagcaagccagtttgcatgcatggggga
ggtggggctgggagctatccagctgctgggggagttgggggaacgagtggagggagtgga
caaatctcaagccgccctagttcagccagctgcaagcggtgtgattcgtgcaagaaacca
ggcaacttatatgacatcagtgaggacaacctcctcctcttggatcaaactgggggtaag
caccctctggagagtggaaagggagggggaggcacaggtgcccaaacccaggtacagagg
cggaaatttggcccaggtggtaaggttttgcgcaggcagcactcttatgacacatttgta
gagctgcagaaggaaggggcgggcaggatgggtgggtttggaggcagtggcggagcgtca
atgcttcctccaccccgaagtgtgagcctaaaagacaaagaccgctacatggagggcacg
agcccctacgcccagatgtttgagcagtatgcaggaggggagcgggagacatcatatttt
ggggacagagggaagggtggggggtcatcatttagcttattccgtgggggtgaaggtggg
ttgcaccgtcgctccgtgggtgagagagacatgagggatagggatagaggcatgatggga
ggaggtgtgggaggtacccgaggggtcgggacttactccttgtctaaatctctctaccca
gataaggtgaaccagaacccattcatcccaaccttcggcgacgaccagtgtctattacat
ggcgccaaatcatactacatcaaaaagcagcaggcacagccgcagcagcaacagacgcca
caacagccgcagcagcaacagctcctcaacaacagtcgggctgacttccgaggctccatg
ggggtgacttcctatttgcctgcttccgcaacttctggggtactgtccaatgtggcccct
cggttccccaaggagctatgtctgggcgggcctcttggcaaccactatagtggaggacct
agcaacaacaagctgctgtcagcaagggatgggttaggaatgggtcaaggacagagacca
tttaatggctcgagcaacggacatgtttacgagaagctttccagtatagagtctgatgtc
tga
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