Carassius gibelio (silver crucian carp): 127959274
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Entry
127959274 CDS
T08819
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43a
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgib01002
]
127959274
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127959274
Enzymes [BR:
cgib01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127959274
Peptidases and inhibitors [BR:
cgib01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127959274
Ubiquitin system [BR:
cgib04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127959274
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
TetR_C_13
Motif
Other DBs
NCBI-GeneID:
127959274
NCBI-ProteinID:
XP_052414297
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All DBs
Position
B6:17110747..17246516
Genome browser
AA seq
1155 aa
AA seq
DB search
MDTPRETRKQKIKAKSAKRKDKTHKSQRLFRRKSLKSLGNFMSRIVKTLGTLAHLGDADQ
PDAAEDDDGGFGDTLSAHNTGNPKESSARKTAAPSSSYGSVKERLSWCYGEKTPGVQGLK
NHGNTCFMNAVVQCLSNTELLAEYLGLEQYKCEFNEMRINGMMKNEEVRGEVTEKLASLV
RALWTLDYTPQLSVEFKSVVSKYGSQFKGNAQHDALEFLLWLLDHVHEDASLSTNNNHNS
KTKPSSKGPVGLEESSCPGSANSQKPGTRHSFVQEHFQAQYRSSLTCPHCLKQSNTFDPF
LCISLPIPLRQTRALNVILVFNTEGQRFLRVGLAVPLFGSISTLRAMVAEEGKISSDQVI
LTEMNTNGFQRSFSDEDDMTSISESDVIYAFQAPPLFRRGGSMRFSGFHHSLPSSPYIAE
PEGHSLPPSGTLSSEFLNQGGSSKILLLICNVAGSGQQVTRFGPPILMRVERTLSWDHLQ
QSVCNKLYLFQKNTIMKTTELFRIRVVGGSASCSYLSPHDSRPLCHPTVDRALKLCGPGG
PLHVRLVIEWENRIKECLFGNIQEEVIEDAESVRMQQQNHVQQHSCTLDECFQLYTKEEQ
LAPDDAWKCPHCKQMQQGMVKMSLWTLPDILILHLKRFRQVGKRRNKLSTLIRFPISGLD
MTPHVVKRSQSMKNLAPWPATWKHGDTDFLYDLYAVCNHHGGMHGGHYTAYCRNSVDGHW
YSYDDSSVEIVPEDELCTRGAYILFYQRRNVIPPWSANSSVRGSTSSSMSDHWLIRLNGD
SKRGSMVSRSSTTCPSSIPDSPESPIFQNVPSMDERGGFESRPFVRGIQGRSVSMKSPTK
TKMLPLRWSFGNKERHKPAQVPGQAPAELVEYLESGRRPRCTKDPIVALMNRPSDKTSGK
EEVTKKSTAKSSSHSSLGPPEFLKIPQGQEKSSSEKAMGQQPSSRPREDGTLTRRSNRKS
KQDKSQSRNSSGTGIQSSSSGPSRWDDPGEERLHLEEKQRKGPETKHHDNVFAFLKGGFM
KKDSLRRSRDSESMKSGDTDLKSLSGVSLSNGTHKKNSEGKANSTNQARSRLGDEFANGK
VSRGSSDIKRSQSSSNIQSKADLSLRRTASLHRNGTLAAQLQNVPMDRGSQNTLQRTRYS
TNSLGRKKAVPESSF
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggatactccgagggaaaccaggaaacaaaaaatcaaagccaaatcagccaagcgcaag
gataagacgcacaagtcccagaggctgttcagaaggaaatcgctaaaatcgcttgggaat
tttatgagcagaattgtcaaaactttgggcactttggcacacttgggggacgcggaccag
ccggacgcggcggaggatgatgatggtgggtttggagacactctgagcgcccacaacact
gggaatcccaaagagagctcggcgaggaagaccgctgctccctcatcttcttatggatcc
gtcaaagaaagactgtcctggtgttacggcgagaaaactccgggggttcagggtctaaag
aaccacggaaacacctgttttatgaacgccgtggtgcagtgcttgagtaacacggaactt
ctggcagagtatttgggtctggagcagtataaatgtgaattcaatgagatgaggatcaac
gggatgatgaagaacgaggaggtgaggggggaggtgacggagaagctggcatcgctagtg
agggcgctctggacgctcgattacacgcctcagctgtcagtggaatttaagagtgttgtg
tccaagtatggctctcagttcaaggggaacgctcaacatgatgctttggagttcctgctg
tggcttctggaccatgtacatgaggacgccagcctctccaccaacaacaaccacaacagc
aaaaccaaaccatccagcaagggtcctgtgggattggaagagagttcatgccccggctca
gcaaactcacagaagcctggaactcgacacagtttcgtacaggagcacttccaagctcag
tacaggtcatcattgacgtgccctcattgccttaaacagagcaacacttttgaccctttc
ctgtgtatttcacttccaatccctctgcgacagaccagggccctgaatgtgattctggtg
ttcaacactgaaggtcagcggtttctgagagtagggttggctgtgcctctctttgggtct
atctcaacgctcagggccatggtagcagaggagggcaagatctcttcagaccaggtgatt
ttgacagagatgaacacaaatgggttccaacgctctttctctgatgaagatgatatgacg
agtatctcagagagtgatgtcatctacgccttccaggctccacccctcttcagaagagga
ggctccatgcgattctcagggttccatcactccctcccttcctcgccatacattgcagag
cctgaaggtcacagtttaccaccctcagggacgttatcatcagaattcttgaatcaggga
ggttcttcaaagatcctcctgttaatctgcaatgttgctgggtctggccaacaagttaca
aggtttgggcctccaatcctgatgagagtagaaaggactctgtcttgggatcatctgcaa
cagagtgtctgcaataagctttacttatttcagaaaaatacaatcatgaagactactgaa
ctgtttaggattcgtgtggtgggtgggtcagcttcctgcagttacctgtctccccatgac
agcagacctctgtgccacccaaccgtggacagggccctgaaattatgtggtcctggtggt
cctctgcatgtgaggcttgtgattgaatgggagaacagaatcaaagaatgtctctttggt
aacattcaagaggaagttattgaggatgcagagagtgtaagaatgcagcagcagaatcat
gtacagcagcacagttgcacactggatgaatgttttcagctctacaccaaagaggagcag
ctggcgccagatgatgcatggaagtgcccccactgtaagcagatgcagcaggggatggtg
aagatgagcttatggaccctgcctgacatcctcatcctgcacctcaagcgttttcggcag
gtgggcaaacggcgaaacaagctctccaccctcattcgctttccgataagcggtctggat
atgactccccatgtggtgaaacgcagtcagagcatgaagaatttggccccgtggcctgca
acttggaaacatggagatactgacttcctatatgacctgtatgcagtctgtaaccaccac
ggaggcatgcatggaggccattacacagcctattgtaggaactccgtggacggccactgg
tacagttatgacgacagcagtgtggagattgtgccagaggatgaactgtgcacacgcggg
gcatatatcctgttctaccagagaagaaatgtcatcccaccctggtccgccaacagctcg
gtcagaggttccaccagctcctctatgtcagatcattggctcatccgtttgaatggtgat
agtaaaagaggaagtatggtctcacggtcttccacaacatgcccttcttccatcccagac
tccccagagtctcccatctttcaaaatgtaccctcaatggacgagagaggtgggtttgaa
agcagacctttcgtgcgaggaatccaagggcgtagcgtaagcatgaaaagtcccaccaag
accaaaatgctcccactccgatggtcctttggaaacaaagaacgccacaaacctgcccaa
gttcctggccaggctcctgcagaactggtggagtatttagagtctggcagaaggccaaga
tgcaccaaagaccccattgttgccctaatgaatcgaccttctgataaaacaagtggtaaa
gaagaagttacgaaaaaatccacagccaaatcttcaagccacagcagcctcggacctcca
gagtttctcaaaataccacagggtcaagaaaaaagtagctcagagaaagcaatgggccaa
caacccagcagcagaccaagagaagatggaactttgaccagacggagcaacagaaaatca
aaacaggacaaatcacagtccagaaacagctccggcacagggatccaatccagttccagt
ggtccaagcagatgggatgatccaggtgaggagcgactccatctggaggagaaacagagg
aagggaccggagacaaaacatcacgacaatgtcttcgcttttcttaaaggtggtttcatg
aagaaagactcgcttcggaggtctcgagacagtgaatctatgaaaagtggtgacacagat
ttgaaaagcctatctggagtttcactctccaatgggacacacaaaaaaaattcagaaggt
aaagctaatagcactaaccaagctcgtagcagacttggagatgaatttgcaaatggcaag
gtgagtcgtgggtcatcagacattaaacgctcgcaaagttcttccaatattcaaagcaag
gccgatctaagcttaaggaggacagcatctctacacaggaatggcacgttggcagctcag
ctgcagaatgttcctatggacaggggctctcagaacaccctgcaacgcacacgctatagc
acaaactcgctgggcagaaagaaggcagtccctgaatcaagcttctga
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