Carassius gibelio (silver crucian carp): 127959832
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Entry
127959832 CDS
T08819
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 40 isoform X1
KO
K11869
ubiquitin carboxyl-terminal hydrolase 40 [EC:
3.4.19.12
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgib01002
]
127959832
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127959832
Enzymes [BR:
cgib01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127959832
Peptidases and inhibitors [BR:
cgib01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127959832
Ubiquitin system [BR:
cgib04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127959832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
YukD
Motif
Other DBs
NCBI-GeneID:
127959832
NCBI-ProteinID:
XP_052415178
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All DBs
Position
B6:complement(24577143..24593626)
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AA seq
1268 aa
AA seq
DB search
MFGDLFEEDGDSFSSTSGKGVKGRECEPPPPRGKIKLCGIKNQGGTCYLNSLIQTLLFTP
EFREELFCLGPDELGCLADKDKPEAKVCVRVIPLELQRLFSHLLLVDEQTASTTDLTDSF
GWTNNEEMGQQDVQELNRILFSALESSLVGTSGSSLIHRLYHGTLVNQITCKECGNISER
QEDFLDLTVSVRGVSGLEEALWNMFVEEEMFEGNNLYRCSRCEQLVRAAKSAKLRQLPPF
LTISLLRFNFDFAKCERYKETGSYVFPLIFNLRPFCEQNNWPDSEYSYELFSVIIHKGGC
YGGHYHVYIKDIDQLGHWEAPEEEVKVKVRTQRQEDKVGEKKKESENSVDTEDPLSVLTD
VLAQEESKSVLVDQLGQKLMNKTGMPWSKKYKKQYGTISKFLQNHPEVFLLVSNGTRVAL
KAAGPATTEPSPTEPGSSASANNSPDNTELQTAGDTEGPDGCHWFDLNDSTVTAISEKDI
EKQFQGKESAYMLFYRKTTMKRPPEAIGNPAYKVPPHLVEMVQEMNARLQQRRAEFDASS
NSVEVRLHLAPHYHYQNGALHPISPDEDSIITVTFDRRKTVGDLRLAIYQMQDLWEGDMA
LTLAKNVPAGLHLYDTLTDDQISLYSAGVSNGSDLFVWNGREVSGVAVKTGLEWEPVLLT
VLRPSLEELGCEDGSGVEDTDGSGLVRSMKGFAGGATLSTVLEALGPQEALLCQEQSRPG
ATGGGASGWRVFPPQDMQRTLRELSLKDGDALLLLQPEEIDSSIFSLSGDMVTVTTPSDC
RWLQVEFCPQSATKEEEEEEEEQGKKRSKVSASGNMLLAEVKEKALEELRLQDELSGVEC
CLRQMDRTGKLLPPVHEHLSVRDAGIRLMTSLYLCPGPVPTETQLFLYFSVGLAPSVGQE
LEIIVEESLTVKECLKEMLQMAKLDGESWHLRRVDWCEEIGEPLMDEHASLKEAKVMHGD
TLVLVEGRLPPKGYLKLSVKLYIDAIDSSSVPELNHTAESLSIEGLTTEGSGSEMRFIGH
VEISEEASLDDLKTQMMTLPALQDVCVPSPAFLRVWLLEGKKLSRILRGNQQTLRKLKLG
NGVEVCVQRLMNEENLGLKDLLLRVQMGVPGEKAYYPSEEFLWDAGRDGTPRGLYAALAS
RYGLTPDNLLLAKHLPDKHTWMPISNWTQQVSKKKKKRKAESLQAAPFYLKDGDTIGVKN
LLIDNNKEFTTLEDEIGQQSLRQEAANHNTRGHLATGDYSKDIGSKKSGPTKNRKPEVAL
SINVGVFR
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgtttggagatctttttgaggaggacggggatagcttttcctctacatctggcaaaggt
gtgaaggggagagagtgtgagcctccaccacccagagggaaaatcaaactctgcgggatc
aagaatcagggtggcacctgttacctcaactccctgatccagactttgctgttcacacca
gagtttagggaggagctgttctgtctcgggccggatgaattaggatgtctggctgacaag
gacaaaccagaggcaaaggtgtgtgtccgtgtgattcctctggagcttcagagactgttt
tctcatctgctgctggtggatgaacaaaccgcctccacgacagacctgaccgacagtttt
ggctggacgaacaatgaggagatgggtcagcaggatgtgcaggagctgaaccggatcctg
ttcagtgctctggagagctctttagtaggcacttcaggcagcagtctcatacaccggctg
taccatgggacgcttgtcaaccagatcacctgcaaggagtgtggcaacatcagcgagaga
caggaggactttctggacctgactgtgtcagtgcgtggtgtgagtgggctagaggaggcg
ctgtggaacatgtttgtggaggaggagatgttcgagggtaataacctgtaccgctgcagc
agatgtgagcagctggttcgggccgctaagtctgctaaactgagacaacttccaccattc
ctgaccatttctttgttgaggttcaactttgactttgccaagtgtgagcgctacaaagag
accgggagctacgtttttcctcttatattcaacctcagaccattttgtgagcagaacaat
tggcccgactcagagtattcatacgagctcttctccgtcatcatacataaaggaggttgt
tatggaggtcattatcatgtctacatcaaagacatcgatcagctcggccactgggaggca
ccggaggaagaggtaaaagtgaaggtgagaacccagagacaagaggacaaagttggtgaa
aaaaagaaagagagtgaaaattctgttgacaccgaggatcccctttctgttctcactgat
gttctggctcaggaggagtccaaatctgttcttgtagaccagctgggccaaaaactgatg
aataaaacaggcatgccgtggagcaaaaaatataaaaaacagtatggcaccatcagcaag
tttcttcagaaccaccctgaagtgtttctgctggtctccaatggaacccgtgtagctctg
aaagctgctggtcctgcaacaacagaacccagtccaacagagccaggcagttcagcttca
gccaataacagcccagacaacaccgagctgcaaacagcaggagacactgaaggccctgat
ggatgtcattggtttgacctgaatgactccactgtgactgccatttcagagaaggacata
gagaagcagtttcagggaaaagagagtgcctacatgctcttttacaggaagacaaccatg
aaaagacctccagaagccataggaaaccctgcgtacaaagtgcctcctcacctggtggag
atggtacaagagatgaatgcaagacttcagcagagaagagctgagtttgatgccagcagc
aacagtgttgaagtgcggctgcatctggcccctcattaccactaccaaaatggagccctg
caccccatatctccagatgaagactccatcatcacagtcacctttgaccgccgaaagact
gtgggagacctgcgattggccatctaccagatgcaagatctttgggaaggagacatggca
ttgacattggctaagaacgtgccagctgggttacatttgtatgacacattgacagatgac
cagatctccctgtatagtgctggtgtgtctaatggctctgatctctttgtgtggaatgga
agagaggtcagtggtgtggcagtgaaaactggcctcgaatgggagcctgttttgctcact
gtgttgcgtccctctttggaggagctgggatgtgaggatgggtcaggggtcgaagacact
gatggatccggtctggtgcgttccatgaagggctttgctggtggggccactctgagtaca
gtgctcgaggctttaggacctcaagaggccttactgtgccaggagcagagccgtccaggg
gccactgggggcggggcgagtgggtggagggttttccctcctcaagacatgcagaggaca
ctgagagagctgtctctgaaggacggggacgctctactgctactgcagccagaggaaata
gacagcagtatcttcagcctcagcggtgacatggttactgtgacaacgccctcagactgc
cgctggctgcaggtggagttttgcccacagagtgcaacgaaggaggaagaggaggaggag
gaggagcaggggaagaaaaggagtaaagtctcagcctcagggaacatgctgctggcggag
gtgaaggaaaaagctcttgaggaacttcgcttacaggatgagctcagtggtgttgaatgt
tgtctgaggcaaatggatagaactggaaagcttttaccaccagtgcatgagcatttgagt
gttcgggatgcagggatcaggttgatgacttcactctacttgtgtcctggaccagtgcca
acagaaacacagttgttcttgtacttcagtgttggtctagcgccctcagttggtcaggag
ctagagattattgtagaggagtctctaacagtcaaagagtgccttaaggaaatgttgcag
atggccaaacttgacggtgagtcatggcacttaagaagagtggactggtgtgaggaaatt
ggagagccacttatggatgagcatgcatctctgaaagaagcaaaggtcatgcatggggac
acactggtgctggtggaggggcgtctgcctccaaagggttacctcaaactgtctgtgaag
ctgtacatagacgcgattgacagctccagtgttccagagctgaaccacacagcagagtcc
ctgagcatcgagggactcaccacagaggggtctggatcagagatgagattcattggtcat
gtggagatatcagaggaggcttcccttgatgatctcaagactcagatgatgactctgccg
gcacttcaggatgtttgtgtgcccagtcctgcatttctgcgtgtatggctgctagagggc
aagaaactgtccaggatactcagaggaaaccagcagacactcaggaagctgaagctgggg
aatggggtggaggtgtgtgttcagaggctgatgaacgaggagaacctgggcctgaaggat
ttattgctgagggttcagatgggggtgccaggagagaaggcgtattatccttctgaggag
tttttgtgggatgcagggcgggacggtacccccaggggcctatacgctgctctggcatcc
cggtacggtctcactcctgacaacctgctcctggctaaacacctgcctgacaaacacacc
tggatgcccatttccaattggactcagcaggtctccaaaaaaaagaagaagaggaaagct
gagagtctccaagctgctcccttctacctgaaagatggagatacaataggtgtcaagaat
ctgctaatagacaataataaagaattcactactctggaagacgagattggtcagcagagc
ctcaggcaggaggcagcgaatcacaacacaagggggcatcttgccactggagactattca
aaagacattgggtccaagaagtcgggcccaactaaaaaccggaaaccagaggtggcctta
tcaatcaatgtgggggtgttcaggtaa
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