Carassius gibelio (silver crucian carp): 127969361
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Entry
127969361 CDS
T08819
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 22-like isoform X1
KO
K11366
ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:
3.4.19.12
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgib01002
]
127969361
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgib03021
]
127969361
04121 Ubiquitin system [BR:
cgib04121
]
127969361
03036 Chromosome and associated proteins [BR:
cgib03036
]
127969361
Enzymes [BR:
cgib01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127969361
Peptidases and inhibitors [BR:
cgib01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127969361
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
127969361
Ubiquitin system [BR:
cgib04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127969361
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
127969361
SLIK complex
127969361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-UBP
Peptidase_C98
ISG65-75
Motif
Other DBs
NCBI-GeneID:
127969361
NCBI-ProteinID:
XP_052427207
LinkDB
All DBs
Position
B12:20858980..20886985
Genome browser
AA seq
507 aa
AA seq
DB search
MSPAGCSHVNAFKVDNWKQNLRVIYQCFVWSGSLETRKRKAKSCVCHLCGAHLNRLHSCL
HCVFFGCFSKKHIHDHAKNKRHNLAIDLLYGGIYCFVCQDYIYDKDMEQIAKEEQRKAWK
LQGIGEKYSMWEPTKRELELLRHNPKRRKITANCTIGLRGLINLGNTCFMNCIVQALTHT
PLLRDFFLSDRHKCEMQSSSCLVCEMSQLFQEFYSGHRSPHIPFRLLHLVWTHARHLAGY
EQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCSCIIDQIFTGGLQSDVTCQVCNGVS
TTIDPFWDISLDLPGSSTPFWPLSPGSDGSVMNGDSHPSGATTLTDCLRRFTRPEHLGSS
AKIKCSGCHSYQESTKQLTMKRLPIVACFHLKRFEHSAKLRRKITTYVSFPLELDMTPFM
ASSKESRMNGQYQQPVDSLNNENKYSLFAVVNHQGTLESGHYTTFIRQHKDQWFKCDDAI
ITKASIKDVLDSEGYLLFYHKQFLEYE
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgagtccggcagggtgctcccatgtgaacgcgttcaaagtggacaactggaagcagaat
ctgcgggttatataccagtgctttgtgtggagcggctcgctcgaaaccaggaaacgcaag
gcgaagtcatgcgtgtgtcacctgtgtggagctcatttgaatcggcttcactcctgtctc
cactgtgtgttcttcggctgcttcagcaagaaacacatccacgatcacgccaaaaacaag
agacacaacctagctatagaccttttgtacggtggaatatattgctttgtgtgccaagac
tacatatacgacaaagacatggagcagattgccaaagaagaacaaagaaaagcgtggaaa
ttgcaaggtattggagagaaatattcaatgtgggagcctacgaaacgagagctggagctg
ctgcgacacaaccccaaacgaaggaagattacagccaactgcaccataggactgaggggt
ttgataaacctcgggaacacgtgctttatgaactgcatcgtccaggcgctcacacacact
ccactgctgagggacttcttcctgtctgaccgacacaagtgtgagatgcagtccagctcc
tgcctggtgtgtgaaatgtctcagctctttcaggagttttactcgggtcaccgctctcct
cacattcccttccggctgctgcacctggtctggactcatgctcgacatctcgccggctac
gagcagcaggacgctcacgagttcctcatcgctgctctggatgtgctccacagacactgc
aaaggagatgacaatgggaaaaaagccaacaacccaaaccactgcagctgcatcattgac
caaatcttcacgggaggcctgcagtctgacgtcacctgccaagtctgcaatggggtttcc
acaacgatagacccgttctgggacatcagtctggatctgccggggtcctccaccccgttc
tggccgctcagcccgggcagtgatggcagtgtgatgaacggagacagtcacccgagcgga
gccaccacgctcacagactgcttacgcaggttcactcgacccgaacacttaggaagcagt
gccaagatcaaatgcagcggttgccatagttaccaggagtccaccaagcagctgactatg
aagaggcttcccatcgtggcgtgtttccatctcaaacggttcgagcattcggcgaagctc
cggcggaagatcaccacatatgtgtcctttcctctagagctggacatgacgcccttcatg
gcctccagtaaagagagccggatgaatggtcagtaccagcagcccgtcgactctctgaac
aacgagaacaagtattctctgttcgcggtggtcaatcatcagggcacgctggagagcggt
cactacaccacgttcatccgccagcacaaggaccagtggtttaagtgtgatgatgccatt
atcactaaagccagcattaaagatgtcctggacagtgaggggtacttgttattttatcat
aagcagttccttgaatatgaataa
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