Carassius gibelio (silver crucian carp): 127972737
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Entry
127972737 CDS
T08819
Name
(RefSeq) transcription initiation factor TFIID subunit 3-like
KO
K14650
transcription initiation factor TFIID subunit 3
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127972737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgib03021
]
127972737
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127972737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromo_TP
PHD
PHD_5
PHD_2
Motif
Other DBs
NCBI-GeneID:
127972737
NCBI-ProteinID:
XP_052432447
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All DBs
Position
A4:20963044..21010740
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AA seq
897 aa
AA seq
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MCESYTRSLLRVSVAQVCQAVGWDAVQLSACDLLSDVLERYLQQLARSCHRYSELYGRTD
PGLSDVDQAFGLLGVTIAELEDYVNNMEPVSFPQIIPQFPISKSSVLQFPASGFETDARD
ALRGERRDYIPEYFPPLISLQEDEEEEEPVPADMGTSAEAMQVSLGEEEDGEEEENDENW
LSCHSGQSPRPEGLLPAAKRPRLSTKPGISPEWSYEPREPLSSLNSQHMPHSPSPPLSPE
LPRPPLAPPTPGHKPKLPSPSPARQKNKSPKRGGGSAPIGVLGRPFMLTPPKTNQKAGKR
SPSRPKSPRSPRPSPALLGATGCGWAGPPGDDSSRDGQFRAHDQGDEDIENSIAAVIARA
CADGDGTSDPFAYDSDSDSEGPNPPKPAPKHIFSLIKPPQSLIGKHPLPPVPPNLNPPNR
WTMDDSIDEVIRKANQAQKPIQTPSLSPPEPTYLSSPPDSPPTPPPPLKPPQERKDPATG
TLLKKKLKKDIRAKLKKKDKERLKEKVKEKGKNKDKNKEKKREKERGQVEENKIPWPELS
LGIGGEERRDIISGKKEKDKHKDKKKDKEKSKKEKEKRDKGKERGKEEKRISQGTKDIAA
AVGATSPLFSPQTCLRIPSMLPPLPPILPDKLFPHPKDTKNKDKDKKKDKKEKKKKKERE
KDREKEREKEREKERAREKERDKEEKKKDKEKKEKTKEKEKDKPKLEKSSLLADVLPAVL
PSPVIPRLTLRVGAGQDKIVISKVVPDSEPTPPPPRTPVARSSPAVRMRSPPAPPPPAPA
PVAPPIRPPPVLPPPPPAVPILQPTSQAKARGCSVVTETVSAYVIRDEWGNQIWICPGCN
KPDDGSPMIGCDECDDWYHWPCVGILTAPPEYQSWFCVKCAGKKKDKKTKKRKRKAQ
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgagagttacacgcgctcgctgctgcgtgtgtccgtggcgcaggtgtgtcaggcg
gtgggctgggacgcggtgcagctgagcgcctgtgatctgctgtccgatgtgctggagaga
tacctgcagcagctggcccggagctgccaccgatactccgagctctatggacggacagac
cctggactgagtgacgtggatcaggcttttggacttttgggagtcactatagccgaactc
gaggactatgtaaataacatggagcctgtcagcttcccacaaattatccctcagtttccc
atcagcaagagcagcgttctgcagtttcctgcttctggcttcgaaacagacgcccgtgat
gccctgagaggcgagaggagagactacatcccagagtacttccctccgctcatttcactg
caggaagatgaggaagaggaggagccggttcctgcagatatgggcacttctgccgaggcc
atgcaggtctccttgggtgaggaagaggatggtgaggaagaggagaatgacgagaactgg
cttagctgtcacagtggacagagtcccaggcctgagggtctattacctgctgcaaagaga
ccccgcctgagcacaaaacctggcattagccccgaatggagttatgagccacgggaacct
ctcagttccctcaattcccaacacatgccgcattccccctcccctcccctctctcccgaa
ttaccccgacctcctttggcacctcctacacctggacacaagccgaaactgccctcgccc
tctcctgcacggcagaagaacaaatcacccaaaagaggtggtgggtctgcacctattggt
gtattggggcgaccatttatgttgaccccacctaagaccaatcagaaggcaggaaagagg
tcacccagtaggcccaaaagcccacgtagcccaaggccaagccctgcccttttgggtgca
actggatgtggttgggctggacctcctggagatgatagttctcgtgatggccaattcaga
gctcatgatcaaggagatgaggatattgagaactctattgctgctgtcattgcacgggct
tgtgcagatggagatggcacatcagacccttttgcttacgactctgactcagacagtgag
gggccaaaccctccaaaacctgcacccaaacatatatttagcctcatcaaacctccacaa
tctctcatcggaaaacacccacttccaccagtacccccaaatctcaacccacccaaccgc
tggacgatggatgactccatagacgaggtcatccgaaaggccaatcaggctcaaaagccc
attcagacccctagtctttcacctccggaacccacttacttgtcgtccccacctgactca
cctcccacaccgccgccacctcttaaacctccccaggaacggaaagacccagctaccggt
acacttctcaagaagaaactcaagaaggacatcagggccaagttgaagaagaaagacaag
gagcgactcaaggagaaggtcaaagagaaaggaaagaataaggacaagaacaaggagaag
aagcgagaaaaggagcgagggcaggtagaggaaaacaagataccctggccagagctatcg
ctaggaattggaggtgaagagcggagagatatcattagcgggaagaaagagaaggacaag
cacaaggacaagaagaaagataaagagaaaagcaagaaagagaaggagaaacgagacaag
ggcaaggagcgaggcaaggaggagaagaggatatctcaaggaaccaaagacattgctgct
gccgttggcgccaccagcccactcttcagcccgcagacatgcctacgaatcccatcgatg
ttgccccctttgccaccaatactccctgataaattgttccctcaccccaaggataccaag
aacaaagacaaggacaagaagaaggacaagaaagagaagaagaagaaaaaagagagggag
aaagatagagagaaagagcgtgaaaaagaacgagagaaggaacgagcaagggagaaggaa
cgagataaagaggagaagaagaaagacaaagagaagaaagaaaagacgaaggaaaaagag
aaagacaagccaaaacttgagaaatcaagcttattggctgatgttcttcccgctgtccta
ccgtctcctgtcatacctcgactgaccctcagagtgggcgctggacaagacaagattgtg
atcagtaaggtggtcccagattcagaacccacacctccaccaccacggaccccagtggcc
aggtccagtccagcagtacggatgcgttcccctcctgctccccctccacctgccccagct
cctgtagcacctccaatccgccctcctcctgtcctgccccctccacccccagccgtcccc
attctgcagccaaccagccaggccaaagcacgaggatgcagcgttgtcacagagaccgtc
agtgcatacgtgattcgggatgaatggggtaatcagatctggatttgcccaggatgtaat
aaacctgatgacggcagtcccatgatcggatgcgacgagtgtgacgactggtatcactgg
ccctgtgtgggtattttaaccgcccctccagagtaccagtcctggttctgtgtgaaatgc
gctggcaagaagaaggacaagaagacaaaaaaaaggaaacgcaaagcacaatga
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