Carassius gibelio (silver crucian carp): 127975370
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Entry
127975370 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5 isoform X1
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127975370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127975370
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
127975370
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
HECT type E3
127975370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
PABP
zf-UBR
DUF5867
Motif
Other DBs
NCBI-GeneID:
127975370
NCBI-ProteinID:
XP_052435347
LinkDB
All DBs
Position
B16:complement(30353233..30398259)
Genome browser
AA seq
2823 aa
AA seq
DB search
MTSIHFVVHPLPGTEDQLNDRLREVSEKLNKYNCNSHPHLIPLEQAKLKQCVVGPNHAGF
LLEDGRICRINFAVQPDRLELSKPDGNDGSKLSSVSGAGRSSRPGRTSDPPWFLSGSDTL
GRLAGNTLGSRWSSGVNGGSSGGGASSGGGAGGGSGSGGGAGGAAGGGGSSGRSSTAARD
SRRQTRVIRTGRDRGSGLLGSQPQPVIPASVIPEELISQAQVVLQGKSRSVIIRELQRTN
LDVNLAVNNLLSRDDEDGDDGDDTASESYLPGEDLMSLLDADIHSAHPSVIIDADAMFSE
DISYFGYPSFRRSSLSRLGSSRVLLLPLERDSELLRERESVLRLRERRWLDGASFDAERG
STSREGEPSLDKKSVPLQSPVTLGEELQWWPDKDYVTKFVSIGALYSEMVAVSTKGELYQ
WKWNEPEPYRNAQNPSIHHPRVPFLGLTNEKITHLSANSIRATVATESNKVATWVDETLS
TVAAKLEHGAQMFPELQGERIISLHCCALYTCAQLESSLYWWGVVPFSQRKKMLEKARAK
NKKPKSSAGISSIPNITVGTQVCLRNNPLYHAGAVAFSVNAGIPKVGVLLESVWNMNDSC
RFQLRSPESLKNMEKNTKTQEIKTESKPELVKTEMGPPPSPASTCSDTSSIASSASLPYK
RRRSTPAPKEEEKVNEEQWPLREVVFVEDVKNVPVGKVLKVDGAYVAVKFPGTSSSVSSQ
SAAPTDSDPSSLLQDCRLLRIDELQVVKTGGTPKVPDCFQRTPKKLCVPEKAEILAVNVD
SKGVHAVLKTGSWVRYCVFDLATGKAEQENHFPTSNLAFLGQSERNVAIFTAGQESPIIL
RDGNGTIYPMAKDCMGGIRDPDWLDLPPIASLGMGVHSLANLPSNSTIKKKAAIIIMAVE
KQTLMQHVLRCDYEACRQYLINLEQAVLLEQNPLALDALLGHRCDGNRNILHACVSVCFP
VSNKETKEEEEAERSERNTFAERLSAVEAIANAISVVSSNSSGNRTGSSSSRGLRLREMM
RRSLRAAGLGRHESGPSSSDHQDPVSPPIAPPSWVPDPPPMDPDGDIDFILAPAVGSLTT
ASTGTNQGPSTSTIPGPSSEPSVVETKDRKANAHLILKLMCDSVVLRPHLRELLSAKDAR
GMTPFMLAVSGRTYPAAITVLEAAQKIAKGEPSLGEKEDAASVFMEMICPSGTNPDDSPL
YVLCCNDTCSFTWTGAEHINQDIFECRTCGLLESLCCCTECARVCHKGHDCKLKRTSPTA
YCDCWEKCKCKTLIAGQKAARLDLLYRLLTTTNLVTTPNSRGEHILLFLVQTVARQSVEH
CQYRPPRIREDRNRKAASAEDSDMPDHDLEPPRFAQLALERVLQDWNALKSMIMFGSQEN
KDPLSASSRIAHLLPEEQMYLNQQSGTIRLDCFTHCLIVKCAPDITFIDTLLGTLVKELQ
NKYTPGRREEAIIVTRRFLRSVARVFVILSVEMASSKKKNNFIPQPIGKCRRVFQALLPY
AVEELCNVAESLIVPVRMGIARPTAPFTLASTSIDAVQGSEELFSVEPLPPRPSPDQSSS
SSQSASSYIIRNPQPRRSSQSQTTRGRDEEQDDIVSADVEEVEVVEGVAGEEDHHDDQEE
QGEENAEVEGQHDEHDEDGSDMELDLLAAAETESDSESNHSNQDNASGRRSVVTAATAGS
EAGASSVPAFFSEDDSQSNDSSDSDSSSSQSDDVDQETFLLDEPLERTTGSAHANSAAQA
PRSMQWAVRTTPSQRSSGGAPSSSSTPAASSTGLIYIDPSNLRRSSAISTSAAAAAAALE
ASNSSSYLTSASSLARAYSIVIRQISDLMSLIPKYNHLVYTQYPAAVKLTYQDAVSLQNF
VEDKLIPTWNWMVSIMDSTEAQLRYGSALSSAGDPGHPSHPLHASQHTGRRERMTPREEA
SLRTLEGRRRAATLLTARQGMMSARGDFLNYALSLMRSHNDEHSDVLPVLDVCSLKHVAY
VFQALIYWIKAMNLQTTLDTTQIDRKRNRELLELGLDNEDSEHENDEDTNQSSSLQDKDE
DSLPAETGQHHPFFRRSDSMTFLGCIPPNPFEVPLAEAIPLADQPHLLQPNARKEDLFGR
PSQGLYSSSYMASKGLTDLSVDMNCLQILPTKMSYSANMKNVMSMESRQRVGEGQTAAEQ
VMDVSKPGPSPHDLAAQLKSSLLAEIGLTESDGPPLPTFIPHCSFMGMVISHDMLLGRWR
LSLELFGRVFMEDVGAEPGSILTELGGFEVKESKFRREMEKLRNLQSRDLALEVDRDREQ
LIQQTMRQINAHFGRRCTTTPMAVHRVKVTFKDEPGEGSGVARSFYTAIAQAFLSNDKLP
NLDCVQSVSKGMQASNLMQRLRNRDRERERRSGGLRAASRRDRDRDSRRQLSIDTRPFRP
ASEGNPIDESEPLPAHRQALGERLYPRVHAMQPAFASKITGMLLELSPAQLLLLLASEDS
LRARVEEAMELLITHGRENGADSILDLGLLDTPEKAQQQENRKRHGSTRSVVDMELDDPE
DGDDNAPLFYQPGKRGFYSPRPGKNTEARLNCFRNIGRILGLCLLQNELCPITLNRHVIK
VLLGRKVNWHDFAFFDPVMYESLRQLIRHSQTEEAEAVFAAMDLAFAIDLCKEEGSGQVE
LLSGGVNMPVTPLNVYEYVRRYAEHRMLVVAEQPLHAMRKGLLDVLPKNALEDLTAEDFR
LLVNGCGEVNVQMLISFTSFNDESGENAEKLLQFKRWFWSIVEKMSMTERQDLVYFWTSS
PSLPASEEGFQPMPSITIRPPDDQHLPTANTCISRLYVPLYSSKQILKQKLLLAIKTKNF
GFV
NT seq
8472 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccattcacttcgtggttcacccgttacccgggaccgaagaccagctaaatgac
aggctccgtgaagtgtcagaaaagcttaacaaatacaactgtaacagtcatccacacctt
attccattggagcaggccaaactaaagcagtgtgtggttggaccaaatcatgccggattt
ctccttgaggatggacgtatctgcaggatcaactttgccgtccagcccgaccgactggag
ctcagcaagcccgatggaaatgatggttcaaagttgagcagtgtctcaggggcaggaagg
agctccaggccaggcaggactagtgatccgccctggttcctgtctggttctgacacactg
ggcagactggcaggcaacacccttgggagccgctggagttcaggagttaatggaggcagc
agtggaggcggagccagcagtggtggaggcgcaggaggaggcagcgggagcggaggaggc
gctggaggagccgctggaggaggaggatcttcaggtcgatcctccacagcagcccgtgat
tcacgcagacagacccgtgtgatccgcactggcagagatcgaggctccggccttctgggc
agtcagccacagcccgtaattccagcctccgtcatcccagaggagctcatctctcaggct
caggtggttcttcagggaaagtccaggagtgtcatcattcgagagctgcagcgaacaaac
cttgacgttaacttggctgtgaacaacttgctgagtagagacgacgaggacggtgatgat
ggagatgacacggccagcgagtcctacttacctggagaagacttgatgtcactgctagac
gcagacattcactccgcacaccccagtgtgatcattgacgcggacgccatgttttctgag
gacatcagctacttcggctacccctctttccgacgctcttccttgtctcgtctcggctct
tcacgagttctccttctccccctagagcgagactctgagctgctccgcgagcgggagtcg
gtcctgaggctgcgtgagaggaggtggctggatggagcctccttcgatgcggagcgtggc
tccaccagccgtgaaggagagcccagccttgacaagaagagcgtgccgctgcagagcccc
gtcactctgggcgaagagctccagtggtggcctgataaggactatgtaaccaagtttgtc
agcattggggctttgtactctgagatggttgctgtcagtaccaaaggtgaactgtaccag
tggaagtggaatgagcctgaaccttacagaaacgcacaaaatccttctatacatcaccct
cgtgtccctttccttggcttgaccaatgaaaagatcacccacctgtctgccaacagtatc
cgagccactgtggccaccgaaagcaacaaggtggcgacatgggtggatgaaactcttagc
actgttgctgctaaactagaacatggtgcacagatgttcccggagctgcagggagagcgt
atcatctctctgcactgttgtgctctgtacacctgcgcccagctggagagcagtctttac
tggtggggtgttgtgccttttagtcagcggaaaaagatgcttgaaaaggccagagccaag
aataaaaagccaaagtccagtgcaggcatctcttctatacccaacatcacagtaggaact
caggtgtgcctgaggaataaccctctatatcacgctggtgccgtggccttctcggtaaat
gccgggatccctaaagtgggcgtcctgttggagtcagtgtggaacatgaacgacagctgc
cgcttccagctccgctcgcccgagagcctgaagaacatggagaagaacaccaagacccag
gagatcaaaactgagagcaaaccagagctggtgaagactgaaatgggccctccaccctca
ccagcatccacatgcagtgacacttcctccatcgccagcagtgcttctctgccctacaag
cgaaggcgctcgacgccggctccaaaagaggaggagaaagtcaatgaggagcagtggcct
ctgcgagaggttgttttcgtggaggacgttaaaaacgtccctgtgggaaaggtgctaaaa
gtcgatggtgcatatgttgctgtgaaatttccagggacgtcgagcagcgtgagcagccag
agcgcagctcccactgactctgacccgtcctcactgctgcaagactgtcgactgctccga
atagatgagctacaggttgttaaaactggtggaacaccaaaagttccagactgttttcag
cgcactcctaaaaaactttgtgtcccagaaaaagctgaaattttagctgtgaatgttgac
tccaaaggagttcatgctgtgttgaaaacaggcagctgggtacgctactgtgtttttgac
ttggccaccggcaaagctgagcaggagaaccacttccccaccagtaatctggcttttctg
ggtcagagtgagcgtaacgtggccatcttcactgctggccaggagagccctatcattttg
agggacggtaatggcactatttatcccatggctaaagactgtatgggtggaatacgtgac
cctgattggctcgacctcccgccgattgctagcctaggcatgggagtccattcgctcgcc
aaccttcccagtaactccacaatcaaaaagaaagcagccatcatcatcatggctgtggag
aagcagacgctgatgcagcacgtgctgcgctgtgattacgaggcgtgcagacagtacctg
atcaatctggagcaggccgtgctgctggagcagaaccctctcgctctggacgctctcctg
ggacaccgctgcgacggcaaccgcaacatcctccacgcctgcgtctccgtctgcttcccc
gtcagcaacaaggagaccaaggaggaggaagaagcagagcggtctgaaaggaacacgttc
gctgagaggctgtctgctgtggaggccatcgctaatgccatttcagtggtgtccagcaac
agctctgggaaccgcacaggatcgtccagcagccgcggcttgcgtttgagggagatgatg
agacgctccctccgcgctgcaggtttgggccgtcacgaatctggcccttcctccagcgac
caccaagaccctgtttcaccccctattgcacctcccagctgggtaccagaccctccacca
atggatcctgacggtgacattgatttcatcctggcccctgcagtgggctcccttaccacc
gcctccacaggcactaaccaaggacccagcacttccaccatcccaggaccttcttctgaa
ccatcagtagtggaaactaaagaccggaaggctaacgcacatctgattctgaagctcatg
tgtgacagcgtcgtcctgagacctcacttaagagagctgctctctgccaaggatgctcgt
gggatgactccattcatgttggctgtgagcgggagaacttacccagcagccattactgtt
ctagaagcagcacagaaaatagccaaaggtgaaccaagtctcggagagaaggaggatgca
gcgtctgtgttcatggagatgatctgtccttcaggaacaaacccagatgactctcccctc
tacgtcctgtgctgtaacgacacctgcagcttcacctggacgggagctgagcacatcaac
caggacatctttgagtgcagaacttgtggcctgctggagtctctgtgctgctgcactgaa
tgcgccagagtttgtcacaagggtcacgactgcaaactgaagcgaacgtctcccactgca
tactgtgattgctgggagaagtgtaaatgcaagaccctcatcgcgggccagaaagcagct
cgtttagatctgctctacaggctgctgaccaccactaatctagtgaccactcctaacagc
aggggagagcacatcttgctgttcctggtgcagactgttgcaaggcagagcgtggagcat
tgccagtatcgaccacctcgcattcgagaggacaggaaccggaaggctgccagcgctgaa
gactctgatatgccggatcatgacctggagcctcctcgcttcgcccagctggctctagag
cgtgtgttgcaggactggaacgcgctgaagtccatgataatgtttggctctcaagaaaac
aaagacccactgagcgccagcagcagaatcgctcaccttttgccagaggagcagatgtac
ctgaaccagcagagcggcaccatcaggctggactgtttcacacactgcctcatcgtcaaa
tgtgcaccagacatcacttttattgatactcttttggggaccttggtgaaggagctgcag
aataaatacactccaggccgcagggaggaggccatcatcgtcacacgcaggttcctgcgc
tctgtggcccgagtgtttgtcattctcagtgtggagatggcatcttccaagaagaaaaat
aacttcatcccgcagcccatagggaagtgcaggcgtgttttccaggctctgttgccgtac
gcagtggaggagctctgtaatgtggccgagtctctgatcgtgccggttcggatgggcatc
gctcgccccaccgcgcccttcactctggccagcaccagcatcgacgccgtacagggcagc
gaggagctcttctccgtggagccgctgccgccacgaccctctccggatcagtccagcagc
tccagtcagtcagcctcttcttacatcatcaggaaccctcagccccgccgcagcagtcag
tcccaaacgacccgaggccgcgacgaggagcaggacgatatcgtttctgctgacgtagaa
gaggtggaggtggtggagggtgttgcaggtgaggaggatcatcatgatgaccaggaggag
cagggcgaggagaacgcagaggtcgaagggcagcatgatgagcacgatgaagacgggagt
gacatggagctggatctgttggctgctgcggagactgagagtgacagcgagagtaatcac
agcaatcaggacaatgccagcggccgcaggagcgtagtgaccgcagccaccgccggatct
gaagcaggtgccagcagcgttcctgctttcttctccgaggacgactcccagtcgaatgac
tccagtgactcggacagcagcagcagtcagagtgatgatgtggatcaggagactttcctg
ttggacgagcctctagagagaaccacgggctcagcgcatgctaacagtgcggcccaggcg
ccgcggtccatgcagtgggccgtacgcacgacacccagccagcgttcctccggcggcgcc
ccgtccagctcctccacacctgctgcgagctccacaggcctgatctacatcgatccttca
aacctgcgccgcagcagtgccatcagcaccagcgcagccgccgcagcagcagctctggag
gctagtaactccagcagctacctgacctccgccagcagcctggctcgagcctacagcatc
gtcatccgccagatctctgacctcatgagcctcatccccaaatacaaccacctggtctac
acgcagtaccccgctgccgtcaaactcacctatcaggacgccgtcagtctgcagaacttc
gtggaggataagttgatccccacctggaactggatggtgtccatcatggattcgactgaa
gcgcagctgcgttacggctctgctctgtcctcagccggggatcctggacacccgagtcac
ccgctgcacgcttcacagcacacgggacgcagggagcgcatgacgccgcgagaggaggcc
agtctccgcacccttgaaggacgaagacgcgcagcaactcttctgacggctcgtcagggg
atgatgtcggctcgaggagacttcctgaactacgctctgtctctgatgcgttcccataat
gacgagcattcagacgttcttcctgtgctggatgtgtgttcgctcaaacacgtggcgtat
gtgttccaggccctcatctactggattaaagccatgaatctgcagacgaccctcgacacc
actcagattgacaggaagagaaatcgtgagctgctggagctgggtctggacaatgaggac
tctgagcacgagaacgacgaggacaccaatcagagctcctccctgcaggacaaggacgag
gactcgctccctgctgagaccggacagcaccatccgtttttccgccgctcggactccatg
accttcctgggatgcatccctcccaatcctttcgaagtgcccctcgccgaggccattcct
ctggctgaccagccgcatctcctgcagcccaatgccagaaaagaggacttgtttggacgg
ccaagtcagggtctgtattcgtcttcgtacatggccagtaaaggcctgacggatctgagt
gtggacatgaattgcttgcagattctacccacaaagatgtcgtattcggcgaacatgaag
aacgtgatgagtatggagtctcgtcagagggtcggcgaggggcagacggctgcagagcag
gtcatggacgtgtctaaacccggcccttcgcctcatgatctggcggctcagttaaagagc
agtctgctcgctgagatcggtttgaccgagagcgacggcccgccgcttcccacgttcatt
cctcactgcagcttcatggggatggtgatctcccacgacatgctgctcggccgctggcgg
ctttccctggagctgttcggacgcgtcttcatggaggacgtcggagcagaaccaggatct
atcctgactgaactgggtgggttcgaggtgaaggagtccaagtttcggcgtgagatggag
aagctgaggaacctgcagtctcgtgatctggctctggaggtggaccgcgaccgagagcag
ctcatccagcagaccatgcggcagatcaacgctcacttcggccgccgctgcaccaccaca
ccgatggcagtgcaccgcgtcaaagtgaccttcaaggatgaacctggagagggcagtgga
gtggcacgcagcttttacacggccatcgctcaggccttcctctccaacgacaagctgccc
aacctggactgcgtacagagcgttagcaagggaatgcaggctagcaatctcatgcagcgt
ctgaggaacagagaccgtgagcgtgagaggaggagcggaggactgagagctgcatccaga
cgagaccgtgacagggactcgaggagacagctgtcgatcgacacacggccgttcagacct
gcatcagaaggaaacccgattgatgaatcggagccgctgccagctcacagacaagctcta
ggagagagactttaccctcgagtgcacgccatgcagccggcttttgccagtaagatcacg
gggatgctgctggagctctctcccgctcagctgctgctgctcctggccagcgaggactcg
ctcagagcccgtgtggaagaagccatggagctcctcatcactcacggaagggagaacggc
gctgacagtatcctggacctcggcctcctcgacactcctgaaaaagcacagcagcaggag
aaccgaaagaggcacggttcgacccgcagtgtggttgacatggagctggacgacccagag
gatggagacgataacgctcctctgttctaccagcccggcaagaggggcttttactcgccc
cgtccaggcaagaacactgaggccaggctcaactgcttccgaaacatcggcaggatactt
ggcttgtgtctgttacagaacgaactttgccccatcaccctcaacagacacgtcatcaaa
gtgttactcggcaggaaggtcaactggcacgactttgcgttcttcgatccagtgatgtac
gagagtttgcggcagctgattcgtcactctcagaccgaggaggcggaggctgtgtttgca
gcgatggacctggccttcgccatcgacctctgcaaggaggaaggatccggacaggtggag
ctcctgtccggcggggtcaacatgcctgtgacgcctctgaacgtgtacgagtacgtgagg
agatacgcagaacaccgcatgctggtggtggcagaacagcctctgcatgccatgaggaag
ggtcttctggatgtgcttcctaagaacgctctggaggacctgacggcggaggacttcaga
ctgctggtcaacggctgtggagaagtcaacgtccagatgctcatcagtttcacctctttc
aatgacgagtcaggtgagaatgcagagaagctgcttcagttcaagcgctggttctggtcc
atcgttgagaagatgagcatgacggagcgccaagacctggtgtacttctggacgtccagc
ccgtctctgccggccagtgaagaaggcttccagcccatgccctccatcaccatccggccg
ccggacgaccagcacctgcccaccgccaacacctgcatctctcgcctctacgtgccactc
tactcttccaaacagattctcaaacagaaacttttactagccatcaagaccaagaacttc
ggttttgtgtag
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integrated database retrieval system
