Carassius gibelio (silver crucian carp): 128005004
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Entry
128005004 CDS
T08819
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128005004
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cgib01001
]
128005004
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgib03021
]
128005004
03036 Chromosome and associated proteins [BR:
cgib03036
]
128005004
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
128005004
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
128005004
Protein kinases [BR:
cgib01001
]
Serine/threonine kinases: Other
TAF1 family
128005004
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128005004
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
128005004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Ribosomal_L44
Motif
Other DBs
NCBI-GeneID:
128005004
NCBI-ProteinID:
XP_052448605
LinkDB
All DBs
Position
A5:23633236..23651643
Genome browser
AA seq
1981 aa
AA seq
DB search
MSDSDSDEDQDRPFQLTGFLFGNINENGQLEDDSVLDMESKKHLAGLGSLGLGSLITEIT
ASEDGMDEQEQDQSNTDAEGWVRSTDDAVDYSDISEVAEDETRKYRQAMGSLQPSRRTDE
EEDYDADCEDVDAKLMPPPPPPSQPTPAKKEDTPTQNSNVTDEGDGIILPSIIAPSSLGD
KVDFSSSSDSESESDRPSQGSGTEGKAGCLTLPLAGIMQKDAAKALPGVTELFPEFRPGR
VLRFLRLFGPGKNMPSVWRSARRKRKRKQREPHSDVATGDNESQPLEPGALKKSGWDYEY
APPPPPEQCLSDDEINMMAPVESKFLQVSGEGDKVSEVRPRVAEWRYGPAQLWYDMLGVP
EDGSGFYYGFKLREDQKQDSTETEAKPANPPAAEPVSEQEPHQEAHSEQEEDVSPKQDEL
FLMVTQLQWEDDIIWNGEDVKHKGTKTQRASLAGWLPTSMTRNANAYNAQQGLSRSNSQL
VPPTPPPLAKTPSISGSKRDKHNHDHQVSHEDDTPWFSIFPIDNEELVYGRWEDNIIWDD
QNMDRLPSPPVLTLDPNDENIILEIPDEKEERASHSPSKENKKETALKKSRILLGKTGVI
KDEPQQNMSQPEIKDPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPAVELRQPFFPTHMG
PMKLRQFHRPSLKKYSFGALSQPGPHPAQPLLKHIKKKAKMREQERQASGGGDMFFMRTA
QDLTGKDGDLILAEYSEEYPPLLMQVGMATKIKNNYKRKPGKDTGAPDCKYGETVYCHTS
PFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQGYFIRELVDIFVVGQECPL
YEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSIRKRLKL
CADFKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMLVAEQRLKDAGYGEKSF
FAPEEENEEEFQMKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKI
PNKPTQQKDDREPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDV
VRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLESTEVLSTDTD
SSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEEERKELQRMLMGEDNERERGRKERR
KGSSALSTSSHKDDDASSVTSLNSSATGRRLKIYRTFRDEDGKEYVRCETVRKPSVIDAY
LRIRTTKDDDFIRKFALCDEQHREEMRKERRRIQEQLRRLKRNQEKDKFKGPPEKKAKKA
KERPDLKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEE
LIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGTTVHCDYLNVRRPHK
SIHRRRTDPMVTLSSVLESIINDMRDLPNTYPFHTPVNSKLVKDYYKIITRPMDLQTLRE
NVRKRMYPSREEFRESVELIFKNSATYNGAKHPLTLVSQAMLSLCDEKLKEKEERLVRLE
KAINPLLDDDDQVAFSFILDNIVTQKMMVIPDSWPFHHPVNKKFVPDYYKVIINPMDLDT
LRKNISKHKYQNREVFLSDVGLIHTNSVNYNGPDSPYTKTALEIVNVCKQTLAEYDEHLT
QLEKDICTAKEAALDAADLESFDPLTPGPYTPQPDVCENSVSVSLQADSSLLAEATLIPP
TPEKRGGQGRHGRGRMGEDESDVDIEGFEEDDDGKPKTPAPAEEGDLDDEDEEDDEDELL
MRPQRRMHRDEEEEDDDERSRRPAQASVLYQDLLMSDAEDDASEEEGDNPFSSIQLSESG
SDSDAELGLQESTRIGLEQEESMMSYEGEGPDAVMHMEDSNVSYGSYDDGDSQMQRHVSS
PRTGEQDGEEGYGISEEEEEEEEEDRRRGPSVLTQAQLSDDEEDSEEFRSVGGDSDLDSD
N
NT seq
5946 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactctgacagcgatgaggaccaggaccggcccttccagcttacagggtttctg
tttggaaacatcaatgagaatggacagctggaagatgacagtgtgctggatatggagtca
aagaagcacctagctggtctgggctctctgggtttgggttcacttattacagagatcact
gccagtgaggatggcatggatgagcaagagcaagaccagagcaacactgatgcagaggga
tgggtaaggagcacagacgatgcagttgattactccgatatcagtgaagttgcagaagat
gaaacccgcaaatacagacaggcaatgggcagcctccagccatcacggagaacagatgaa
gaggaagattacgatgctgattgtgaggatgttgatgccaaactcatgccgcctccccct
ccccctagtcagcccacccctgcaaagaaagaagacacgccaactcagaacagcaatgtg
actgatgagggtgatggcattatcctaccttccattatcgctccgtcatctttgggcgat
aaggttgatttcagcagttcatcagacagtgagagtgagagtgatcggccgtctcagggt
tcagggacagagggaaaggcagggtgtcttaccctccctcttgcgggcattatgcagaaa
gatgcggctaaagccctgcctggagtcacagagctgttcccggagttcagacctggaagg
gtgttgcggttcttgcggttgtttggtcctggtaagaacatgccgtctgtatggcgaagt
gctcgcaggaaacgaaaacggaagcagagagagccacactcagacgtggctacaggtgac
aatgaatcacagccacttgagccaggggctttgaaaaaatcaggatgggactatgagtat
gcaccacctccaccaccagagcagtgtctgtcagatgatgagataaatatgatggctccg
gtggagtctaagttcctgcaagtatctggtgaaggtgataaggtgtctgaggtgaggcca
agggtggctgaatggcgttatggaccagcacagctttggtatgacatgcttggtgtccca
gaggatggcagtggcttctattatgggtttaaactccgagaagaccaaaagcaagacagt
actgaaacggaggctaaacctgcaaaccctccagctgctgaaccagtcagtgaacaggaa
ccacaccaagaagcacattctgagcaggaggaggatgtgtctccgaagcaggatgagttg
tttttaatggtgacccagctgcagtgggaggatgacatcatctggaatggagaggatgtg
aaacacaagggcactaagactcagcgtgctagtctggctgggtggctgcctactagcatg
acccgtaacgccaatgcttacaacgctcagcagggtctaagtcgcagtaactctcagttg
gttcccccaaccccaccacccttggccaaaactccgtccatatcaggctccaagagggac
aaacataatcatgatcatcaagtctctcatgaggatgacacaccgtggttctccatattc
ccgattgataacgaggaacttgtttatggacgttgggaagacaacataatctgggatgac
cagaacatggaccgcctcccttctcctcctgttcttactcttgaccccaatgatgaaaat
atcatactcgagattccagatgaaaaagaggagagagcctctcattcaccctccaaagaa
aacaagaaagagacagcactgaaaaaaagtcgcattcttttgggaaagactggtgtcatc
aaagatgaacctcaacagaatatgtcccaaccggagattaaagatccttggaatctgtca
aacgatgagttctactaccccaaacagcaggggcttaggggcacttttggaggaaacatc
atccagcactccattcctgctgttgagttgaggcagcccttcttccccactcacatggga
cctatgaaactacggcagttccatcgaccctcccttaagaagtactcatttggcgcgctg
tcccagcctggcccacacccagcccagcctctcctcaaacacatcaagaagaaggctaag
atgcgagaacaggaacgtcaggcatcgggtggaggggacatgttttttatgcgcacagct
caggatctgacaggcaaagacggagacctgattttggccgaatatagcgaggaatatcct
ccccttctcatgcaagttggaatggcgaccaaaatcaagaacaactacaaaagaaaacca
ggtaaagacacaggagcacctgactgtaagtacggagagaccgtttactgccacacttca
ccattcctgggatcactgcaccctggacagctactgcaggcctttgaaaataacttgttc
agagctcccatctacctacataagatgcccgagactgatttcctgattattcggacaagg
cagggctatttcatccgagagcttgtggacatatttgttgtgggtcaggagtgccctctc
tatgaggtgccaggacccaactctaaacgagccaacacacacattcgggatttcctccag
gtgttcatctatcgtctgttttggaagagtaaagatcgtcctcgtcgtatacgtatggag
gacataaagaaagcctttccctctcactctgagagcagcatccgcaaacgcctcaaactc
tgtgctgactttaaacgcacaggaatggattctaactggtgggtgctaaaacctgatttt
cggcttcctactgaagaggagatcagagcgatggtctctccagagcagtgttgtgcgtac
tacagcatgctggtggcagagcagagactaaaggatgctggttatggtgagaagtctttt
tttgcacccgaggaagagaatgaagaggaattccagatgaagattgatgatgaggtacgc
actgccccatggaacacaactcgggcgttcattgcagccatgaaggggaagtgtctcctg
gaggtcacaggggtcgctgaccccactggatgtggagaaggattctcgtatgttaaaatc
cctaacaaacctacacagcagaaggatgatcgagagccccagccagtgaaaaagacagtg
acagggactgatgcggatctgagacgtttgtccctcaaaaatgccaaacagttgctccgc
aagtttggagttcctgaggaagagataaagaaactgtcccgttgggaggtgatcgatgtt
gtgaggaccatgtcgactgaacaggctcgttcaggggaggggcctatgagtaaattcgct
cgcgggtctcgattctctgtagcagaacatcaggaacgttacaaagaggagtgccagagg
atctttgacctgcagaacaaagtattggagtccacagaggtgttgtcgacggacaccgac
agcagctcagcggaggacagtgattttgaggagatgggcaagaacattgagaacatgctg
cagaataagaagaccagctctcagctgagcagagagagagaagaagaggagagaaaagaa
ctgcagcggatgctgatgggagaggacaatgagagagagagaggccgtaaagaaagacgc
aaaggctcaagtgccctttccaccagctctcacaaagatgatgacgcttcctctgtcact
agcctgaactcttcagcaacagggcgaaggttgaaaatttatcgcaccttccgtgatgag
gatggcaaagagtatgtgcgctgtgagaccgttcgcaaaccgtctgttattgacgcttac
ttgcggatacgtaccactaaggatgatgatttcattcgcaagtttgcattgtgtgatgag
cagcacagggaggagatgagaaaggaacggcgaagaattcaggagcagctgcggcgcctc
aaacgaaaccaggagaaagataaatttaaaggtccgcctgagaaaaaggcgaagaaggcc
aaagaacgaccagacctgaagctgaaatgtggagcttgtggtgctattggtcatatgagg
accaataagttctgcccattgtactaccaaaccaatgccccgccctctaatccggtggca
atgacagaggagcaggaagaggagctcgagaagactgtgatccacaatgacaatgaagaa
cttatcaaagtggaaggaaccaagattgtgcttggaaagcagctcattgagagtgctgat
gaagtgcggaggaaatctctggttctgaagttccccaaacagcagcttcctcctaaaaag
aagagacgtgtggggacaacggtgcactgtgactacctcaatgtaagacgtcctcataag
tccatccatcgcagaaggacagatcccatggtcaccctctcttcagtactggagagcatc
attaatgacatgagggaccttcctaacacatacccgtttcacacacctgtgaacagcaaa
ctggtgaaggattattacaagatcatcacacggccgatggacctgcagacgctgcgggaa
aatgttcgcaagcgcatgtacccttcacgagaagagttcagagagagtgtcgaactcatc
ttcaaaaacagtgctacgtacaatggtgcaaagcatcctttaacccttgtcagtcaagca
atgctgagtctgtgtgatgagaaactcaaagagaaagaggagcgtttggttcgtttagag
aaagccattaatccccttctggatgatgatgatcaggtcgctttctccttcatcctcgac
aacattgtcacacagaagatgatggtcatacctgactcctggcccttccatcatcctgtt
aacaagaaatttgttccggattattataaagtcatcatcaaccccatggatctggacaca
ctccgtaagaacatctccaagcacaagtatcagaaccgagaggtgtttctttctgatgtc
ggcctcattcacaccaacagtgtcaattacaatgggcctgatagtccttataccaaaaca
gctctggaaatcgtgaatgtctgcaagcagactttagcagagtatgacgaacacctgact
caactggaaaaggacatctgtactgctaaagaagctgctctggatgctgcagaccttgag
agtttcgaccccttgacccctggaccgtacacgccacagcctgatgtgtgtgagaacagt
gtgtctgtgagtttacaggcagactctagtctgttagctgaggctacgctaatccctccc
acccctgagaaaagaggggggcagggtcgtcacggcagaggccgaatgggcgaggacgag
tctgatgtggacattgaaggatttgaggaagatgacgatggcaaacctaaaacacctgct
ccggctgaagagggtgatctggatgatgaagacgaggaggatgatgaagacgagctcctc
atgcggccacagaggcgtatgcatagggatgaggaggaggaggatgatgatgaacgctca
cgccggccagcacaggccagtgtgctctaccaggatctgctgatgtcagatgcagaagac
gacgccagtgaggaggaaggcgataatccattctcctctatccaactgtcagagagtggc
agtgacagtgatgctgaactggggcttcaggagagcacccggattggactagagcaggaa
gagagtatgatgtcttacgagggggagggacctgatgcggtaatgcacatggaggacagt
aacgtcagctacggcagctatgatgatggagacagccagatgcagagacatgtgtccagc
cccaggacaggagaacaagatggagaggaggggtacgggataagtgaagaggaagaggag
gaggaggaggaggacaggagaagaggtcctagtgttctcacacaggcacagctcagtgat
gatgaggaggacagtgaagaattccgatctgttggtggagacagtgacctggattctgac
aactaa
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integrated database retrieval system
