Carassius gibelio (silver crucian carp): 128019944
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Entry
128019944 CDS
T08819
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgib01002
]
128019944
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
128019944
Enzymes [BR:
cgib01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128019944
Peptidases and inhibitors [BR:
cgib01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128019944
Ubiquitin system [BR:
cgib04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128019944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3517
UCH
UCH_1
FAST_1
Dsc3_N
DUF2014
Motif
Other DBs
NCBI-GeneID:
128019944
NCBI-ProteinID:
XP_052462280
LinkDB
All DBs
Position
A9:21196233..21228396
Genome browser
AA seq
2607 aa
AA seq
DB search
MTATTRGSPVGGNDGQGQAPDGQSQPPLPQNQTSSPNSSNENSPVSPPDDQGQGGSPTPL
EEEEPAFPHTELAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLCKKGLDVKCEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNAHRLVELCVTKLSQDWFPLLELLAMAANP
HCKFHIYNGTRPSESVPAGVQLAEDELFARPPDPRSPKGWLVDLINKFGTLNGFQILHDR
FMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDEELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKESWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKMQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKIPINLLKSLE
GQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMENMRQFSKEHTDFDPQTVRPGSR
YSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLMGD
EPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLE
LIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQANQVEIHEDFIQSCFDRLKASY
DTLCVLDGDKDSINCARQEAIRMVRVLTVLREYITECDSDYHEERTILPMSRAFRGKHIT
LVVRFPNQGRQVDDLDIWSHTNDTIGSVRRCILNRIKANSTHTKIELFIGGEIIDPADDR
KLIGQLNLKDKTLITAKLTQVSTNMPSSPDSSSDSSTGSPGNHGNHFSDGPNPEVESCLP
GVIMSLHLRYISFLWQVADLGCNLNMPLLRDGARVLMKLMPPDNATVENLRAICLDHAKL
GENSLSPTLDSRFFGPSPSQVLYLIEVVYALLMPASGTLGEDASDFQYNFLKSGGLPLVL
SMLTRNNFLPNADMETRRGAYLNALKIAKLLLTAVGFGHVKSVAEACQPVVEGTIPVSPI
NQTTHDQALVLQNALQNIPNPSAECMLRNVAIRLAQQISDENFFQASKYIPDICVIRAVQ
KIVWASGSGSVQHVFSSNEEISKIYEKTNAGNEPDAEDEQVCCEALEVMTLCFALMPTAL
DALSKEKAWQTFIIDLLLHCQNKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLGS
TAKERAKHAADYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTGEPGVE
ETILEGHIGVTKELLAFQTPEKKFYIGCEKGGASLIKELMDDFLFPASNVYLQYMKSGEF
PTEQAIPVCCTPATINAGFELLVALAVGCVRNLKQIVDTLTDMYYLGCEPLTEWEYLPPV
GPRPTKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGSDVEDDMSGDEKQDNE
QSNVDPRDEVFGYQHQFEDKPSLSKTEDRKEYNIGVLRQLQVIFGHLAASRLQYYVPRGF
WKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGC
PHRYECEESFTTLNVDIRNHQNLIDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIK
KFPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGSDVHPDNQQQ
VIQQNEPSEPEPPCSSRYRLVGVLVHSGQASGGHYYSYIIQRNGSGCEGERNRWYKFDDG
DVTECKMDDDEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTLDKDS
ELVKYITELTVTSKPHQVKMPSAIERSVRKQNVQFMHNRMQYSLEYFQFIRKLLTCNSVY
LNSPPGQDHLLPEAEEMAMISIQLAARFLFSTGFHTKKIVRGPASDWYDALCILLRHSKN
VRYWFAQNVLFAYPNRFSEYLLECPSAEVRGAFSKLIVFIAHFSLQDGPCPSPIASPGPS
SQSCDNLSLSEHLFRAILNLLRREVSEHGRHLQQYFSLFVMYANLGLAEKTQLLKLGVPA
TFMLVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVTSRMQSSINGNPPLPNPYGDPN
ITAPIMPLQQVVVDILFVRTSYVKKIIEDCSNSEDTIKLLRFCCWENPQFSSTVLSELLW
QVAYSYTYELRPYLDLLLQILFIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKR
AYQCIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNTQYTYNNWS
PPVQSNETSNGYFLERSHSARMTLAKACELCPEECHLTKHEVASEEDAGRNPSSTQQLLP
GEVTGQQQHTEPDEQEALDEQDTSPPEDTALYPHSPGTKFQQQNNLPHTQPYTGPAAQHV
NNPQRPGPRAQENWEPPEEVPPSQTKD
NT seq
7824 nt
NT seq
+upstream
nt +downstream
nt
atgacggccacgacccgtggctctcctgtgggagggaatgatggtcagggccaggctccg
gatggccagtcccagccacccctgccccagaaccagacatcctctcccaactcatccaac
gagaactccccagtgagcccaccagatgaccagggtcaggggggcagtcccactcccctg
gaggaggaggagccagctttcccccacactgaactggccaagctggatgatatgatcaac
aggcctcgctgggtcgttccagttttgccaaagggtgaattagaagttctccttgaagct
gctatagatctttgtaaaaaaggacttgatgtaaagtgtgaagcatgccagaggtttttc
agagatggcttgacaatatccttcacaaaaatactgacagatgaagctgttagtggatgg
aaatttgagatccatcggtgcatcattaataatgcccaccgactggtggagctgtgtgtg
accaagctctctcaggactggttccctctgctagaactcttggcgatggccgccaacccc
cactgtaagttccacatctacaatggtactcggccctctgagtccgtgcctgctggggtt
cagctagctgaggatgagctctttgcccgtccacctgaccctcgctctcctaagggctgg
ttggtggatttaattaacaaatttggcacattaaacgggtttcaaattctgcatgatcga
ttcatgagtggccaagctctgaatgttcagatcattgctgcactcattaagccttttgga
cagtgctacgagtttctcactttgcacacagtaaagaagtacttccttcccatcatagaa
atggttccccagtttctagaaaacctcacagatgaggaattgaaaaaggaagccaagaac
gaagccaaaaacgatgccctgtctatgataatcaaatctttgaagaacctggcttcccga
gtaccaggacaagaggaaacagtgaagaatttagagatatttaggttaaaaatgatactt
aggttattgcagatttcttcttttaatggcaaaatgaatgcactaaatgaagtgaacaag
gtgatttcaagtgtttcctactacacgcatcgacatggcaatcctgaagaggaagagtgg
ctgaccgcagaacgcatggcagaatggattcagcagaacaatattttgtctattgtgctg
cgagacagccttcatcagccacagtatgtggagaaactggagaagatcctgcgatttgtc
atcaaagaaaaggccctaacgcttcaggacctggacaacatctgggccgctcaagcaggg
aaacatgaggctattgtcaagaatgttcatgatctcctcgcaaagctggcatgggatttc
tcacctgaacagctggaccatctctttgactgcttcaaggaaagctggactaatgcaagt
aaaaagcagagagagaagttactggaattgattcgtcgactggcagaggatgacaaggat
ggtgtgatggctcacaaagtcctcaatctgctgtggaatttggcccatagtgatgatgtt
cctgtggatatcatggaccaggcccttagtgctcatattaagattttggactacagctgt
tcccaggacagggacacacagaagatgcagtggatagacagattcatagaagaattaaga
actaatgacaaatgggtgattcctgcactgaagcaaatacgggagatctgtagcctcttt
ggagaagccccccagaatttaagaaagaaaatacctattaacttactaaagagcttagag
ggtcaaacgcaacggagcccgcatgtcttctatcgacatgacctaatcaaccaactgcag
cacaaccatgcactggtcactcttgtagcggagaacctgtctgcatacatggagaatatg
aggcagttctcgaaagagcacacagactttgatccccagacggttagaccaggaagtcgg
tatagtcatgttcaggaggtccaggagcggctcaatttcttgaggttcttactgaaagat
ggacaactctggctgtgtgcacctcaggctaagcagatctggaagtgcctggcggagaac
gcagtgttcttatgtgatcgggaggcctgcttcaaatggtactccaaacttatgggggac
gaacccgaccttgaccctgacatcaacaaggacttttttgagaacaacgtactgcagctt
gacccctcgctgctgacagagaacgggatgaaatgctttgaacgattctttaaggcagtc
aactgcagggagggcaagctggtggcaaaacgccgggcatacatgatggacgacttggag
ctgatagggctggattacctgtggagggttgtgattcaaggaagtgatgatattgctagt
cgagcaattgacttgcttaaagagatttatacaaacctcggaccaaaattacaagctaat
caggtggagatccatgaggattttattcagtcttgctttgaccggctcaaagcctcctat
gacactttgtgtgtgctggatggagataaagacagcattaactgtgccagacaggaggcc
atccgtatggtgagagtactgacggtgctcagggagtatataacggagtgtgacagtgac
taccatgaggagaggaccatcctgcccatgtccagggctttccgaggaaagcatatcacg
ctagttgtgcgtttcccaaaccaaggccgacaggttgatgatctggatatttggtcacat
accaacgacacaattggctccgtgcggcgctgcattctgaatcgaataaaggccaacagc
acacacaccaaaattgagctgttcatcgggggagagatcattgacccagcagatgacagg
aagctaatcgggcagctaaacctcaaagataaaactctcatcacagccaagctcacccag
gttagcaccaatatgccttccagtccagacagctcctcagactcctctactggctcccct
gggaatcatggcaatcacttcagtgatgggccaaaccctgaagtggagagctgtcttccc
ggcgtgataatgtccctgcacctgcgctacatctctttcctctggcaagttgcagacctg
ggctgtaatctcaacatgcctctcctccgggatggagctcgtgttctaatgaagctcatg
cctccagataatgccacagtggaaaacctgcgagccatttgtctggatcacgccaaactt
ggcgaaaacagccttagccccacattggattcacgtttctttggaccatcaccatctcaa
gtgctttacttgatagaggttgtgtacgccttgctcatgcctgccagtgggacattgggc
gaggatgctagtgacttccagtacaacttcttgaagagtggtgggctgcccctcgttttg
agcatgctgaccagaaataacttcctgccaaatgctgacatggagacccggcggggagct
tatctcaatgcactaaaaatagccaaactgctgcttacagctgtaggctttggccatgtg
aagtccgtggcggaggcctgccagcctgtggtggaggggactatccctgtatcgcctatc
aaccagaccacacatgaccaggctctagtgctacagaacgccttgcagaatatccccaac
ccctccgccgagtgcatgctgcggaacgtggccatccgcctcgcccagcagatctcagat
gagaacttcttccaggcctctaagtacatcccagatatctgtgtcattcgagcagttcag
aagatagtctgggcttctggcagtggctctgttcagcacgtcttcagttctaatgaggag
atcagcaagatctacgagaagacaaatgctggcaatgagccggatgcagaagatgagcag
gtgtgctgtgaagctctggaggtcatgaccctgtgttttgcccttatgcccactgcacta
gatgcacttagcaaagaaaaggcctggcagaccttcattatagatctgctgctgcactgc
caaaacaagtctgttcgtcaaatggctcaagaacagttcttcctcatggccacccgatgt
tgtatgggccataggcctcttctcttcttcatcaccctcctcttcacagttttaggtagc
actgcaaaagagcgggcaaagcatgctgctgattacttcactcttcttaggcacttactc
aactatgcatataacagcaacattaatcttcctaatgcagaagttctcttaaacaatgag
attgactggttaaagcgcatacgggatgaagtgaagaggaccggagagcctggggttgag
gagaccattttggaaggtcacattggtgtcacaaaagagctactagcattccagacccca
gagaagaagttctacattggctgtgaaaaaggaggtgctagtcttatcaaggagttaatg
gatgacttcctgttcccagcatctaatgtgtacctgcaatatatgaagagtggagaattc
cccactgagcaggccatacctgtgtgttgcaccccagccacaatcaatgccggctttgaa
ctcctggtggcattagctgtcggatgtgtgcgaaatctcaagcagattgtggacacacta
actgatatgtactatttaggttgtgaaccacttacagaatgggaatatttgccgccagtt
ggcccaaggcccactaaggggtttgtgggtctgaaaaatgcaggtgcgacttgctacatg
aactcagtgatccagcagctctacatgattcctcccatcaggaatggcatcctggccatt
gaaggcacgggcagtgatgtggaagatgatatgtctggagacgagaagcaagataatgag
cagagtaatgtggatccacgtgatgaggtgtttggctatcagcaccagtttgaagacaaa
ccttctctcagcaagacggaagacaggaaggaatacaacattggggttctccggcagttg
caggtcatttttggacacttggctgcctccaggttgcaatattacgtgcctaggggattc
tggaagcaatttcggttgtggggtgaaccagtcaatctaagggaacagcatgatgccctg
gagttctttaactcactggtagacagtttagatgaggctttgaaagcattgggtcaccct
gccatgctgagcaaagtactgggtggctcttttgctgaccagaaaatatgtcagggctgt
cctcacagatatgaatgtgaggaatcatttacgacgttgaatgtagatatcagaaaccat
caaaatctaattgattctatggagcagtatgtgaaaggagacttgctcgagggtgcaaat
gcctatcattgtgaaaaatgcaacaagaaggtggacacagtgaagcgtttactcattaag
aagtttcctccggtgttggccatccagctgaaacgctttgattatgactgggaacgagag
tgtgccatcaagttcaatgattactttgagttcccacgggagttagacatggagccctat
acagtagctggagtagctaagctggaggggtctgatgtgcatccagacaaccagcagcag
gtgattcagcagaatgagccgtcggagccggaacccccctgcagctctcgctatcgtttg
gtgggagttctggtccactcaggccaggctagtggaggtcattattactcctacatcatt
cagaggaacggcagtggttgcgagggagaaaggaaccgttggtacaagtttgacgatggt
gacgtcactgaatgcaagatggacgatgacgaggagatgaagaaccagtgctttggtgga
gaatacatgggcgaggtcttcgaccacatgatgaaacgcatgtcctacaggcgacagaag
cgctggtggaacgcctacattctcttttatgagcgaatggacacattagacaaggatagc
gagctagttaaatacatcactgagctgacagtgaccagcaaacctcaccaggtgaagatg
ccctctgctattgaacgcagcgtgcgcaaacaaaatgtgcagtttatgcacaaccgtatg
cagtacagcctggagtacttccagtttatcaggaaattgctgacatgtaacagtgtctac
ttgaactcaccaccaggtcaagaccaccttttgcctgaagcagaagaaatggctatgatt
agtatacagctcgctgctagatttctcttcagcactgggttccacacaaaaaaaatcgtc
cgtggccctgctagtgattggtatgatgctttgtgcatcttgctgcgacacagtaagaat
gtgcgttactggtttgcacaaaacgtcctctttgcatatccaaaccgcttctctgagtac
ctgcttgagtgtcccagtgcagaggttcgaggggccttctccaaactcattgtatttatt
gcacatttctccctgcaagatggaccctgcccttcaccgattgcctcacctggaccttca
agtcagagctgtgataatttgagtttgagtgagcacttgttccgtgccatactcaatctg
ctgagaagggaagtgtctgagcatggccgtcacctgcagcagtacttcagccttttcgtc
atgtatgccaaccttggcttggcagagaagacgcagctgttgaagcttggggtaccagct
accttcatgcttgtggctttggatgagggccccggtcctcctattaagtaccagtacgct
gagcttggaaagctctatactgtcgtctcacagctggttcgctgctgtgatgtgacatca
cgtatgcagtcctcaatcaatggaaaccctcccctgccaaacccatatggagaccccaac
atcaccgcacccatcatgcctctgcagcaggtggtggtggacatcctttttgtacgtacc
agttatgtgaagaagattattgaggactgcagtaactcagaggacactatcaaactgctg
agattctgctgctgggaaaaccctcagttttcctccactgtgctgagtgaactactgtgg
caggtggcatattcatacacgtatgagttaaggccttacctggacttgctccttcagatc
ttgtttattgaggactcatggcagactcacaggatccacaatgtgctgaagggaatccct
gatgaccgtgatgggctttttgacaccattcagcgctccaaaaatcactaccaaaagaga
gcttatcagtgtatcaaatgcatggtggctctgttcagcaactgctcagtggcctatcag
attctccagagtaatggcgatttaaagaggaagtggacctgggcagtggagtggctcggt
gacgagctggaacgtagaccatacactggaaatacccagtacacgtataataactggtcc
cctcctgtccagagcaatgagacttctaatggatacttcctggagcgctcccacagtgcg
cgtatgactttagccaaggcctgtgagctgtgcccagaagagtgtcacttaacgaagcac
gaggtggcatctgaagaggacgctggccggaatccgtcctcgacacagcaacttttgcca
ggggaagtgacaggccaacaacagcacaccgagcctgatgagcaggaggcccttgatgag
caggacacttctcctccagaggacactgctctgtaccctcactctccaggcacaaagttt
caacagcagaataacctcccgcatacgcagccgtacactggccccgcagcacagcacgtc
aacaaccctcagcgtccaggcccacgagcacaagagaactgggagccccctgaggaggtg
ccgcccagtcagactaaagactaa
DBGET
integrated database retrieval system
