Carassius gibelio (silver crucian carp): 128030776
Help
Entry
128030776 CDS
T08819
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D-like isoform X1
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04020
Calcium signaling pathway
cgib04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
128030776
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128030776
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
128030776
Ion channels [BR:
cgib04040
]
Ligand-gated channels
Glutamate (ionotropic)
128030776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
BTK
Motif
Other DBs
NCBI-GeneID:
128030776
NCBI-ProteinID:
XP_052474693
LinkDB
All DBs
Position
A16:complement(16407929..16481950)
Genome browser
AA seq
1972 aa
AA seq
DB search
MKAFFVPSRLASSFIAMVTVPTLSLLLALVQWAGQSSSSPHLLLRPRERERDPVASMHFN
IAVIHAGSTVQQGEAGAAAAAGRVPYPGFRRVHSSFGESVVTQWGSANVIWLQVNDSSPR
TLLSQLCDLLAARPLQGLVYEDERPLPLASGPLAPMLEFVSAQTGLPIVAVGGGAGLGRV
PQETGSIFLQFSSSTTLQLEVIFEVLEEYDWTAFSVVSTRHHGYQDFLSVVEGLTDGSFI
GWEKKSIVMLNLTDDPGGARARRLLKENEAQVRLLYCSQEEAEQVFHAAWAAGQASASHI
WFVVGPALSELGLTGLPNRLFAVRPQGWRDEPRRRIARGVSILTHGAVALRKDYGATGGP
HFVTNCQTEGNGTQRIRGRMKYFSNITLGGRDYSFSNEGYLANPFLDVISYTSGSGWEDV
GWWENGVLRLRYPAWSRYSPFLQPPDDAQHLRVVTLEERPFVIVELADPSSGTCIRDSVP
CRRPLNASALQEGVAPMKQCCKGFCIDILKRLARIVGFTYDLYLVTNGKHGKKIDGVWNG
MVGEVVYKRADMAIGSLTINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPYSP
AVWVMMFVMCLTVVAVTVFIFEFFSPVGYNRSLQSGKKAGGSKFTIGKSIWLLWALVFNN
SVPVENPKGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDKKFQHPTE
EYPPLKFGTVPNGSTEKNIRSNYPDMHQYMIKYNQKSVEDAISHLKTGKLDALIYDAAVL
NYMARKDEGCKVMTIGSGKVFATTGYGIALIKNSRWKRPLDLALLQLVGDDEIEMLERLW
LSGICHNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWRLRHCMSKMGQS
GKLDFLLAFSRGMYSCCSIEDETAQGGTKVTVPGHHHTAMVPASSSHVVTSAVSTPAIAI
VQQQQQQPQQPQPSQSHKTPLPGSPPTVVHSGAALGPTNTQLVGAPLPCTTFLPRPDRRL
AVVDRWRLPKTANATTSMGVRGCLTETGPLPQKVAPSWASGGGTASGLDGYKRYYGPIDP
EGLGPCVDQQTGSQTPKTVPRAHQQPPPTSVAFYQEKSMDHGMGKKVGVGTGAGGQGRGV
KSLGTPRLPPKSQAPASLTPNPPLQHPSPPLPSSFWRKRRPKKPKEPGGPLYENILPLVR
RGGGRGASRRPRPSPPLPIPVPVTLSPSYTPPSPSPSFPYTSTSSSSSTTSSSTTSSATS
SRSTSPSSTSTASSRSTQDREAEEEDEDDLDELTEESSLLQGHNRTRDRERSILSPRSFT
HGPPPPIPPRKPWGTFGDREHKKDRERERGGSQLAQLQEWWAGWAERERDRERSGGAQGD
TERKREKKHRKDREKEKKKKKKNKKRKKREERERERERERKRHKVKKKKKKAMKTKKKKK
VSSSKRSEPEEGDVEAERDGEGDGDREGEYTSFSTQYRSAFVDKGSLSAWEGERERGRRD
GGEDDGEERENESGGGRGRQRRPKSSHSRHQQSSKRYPNLNKLPSSVKFWVSGGEAVGTE
VSGPSPPSSLHTLLSSSKRRRSSGVEREVKGRVGERRPLLLHYERGRVNTREGLSFHEWD
SEDEEEEEERERERERERIEERVRQAGRGAVSESERDRIRAEESFSDEGSSGEFGRFERY
WEGTGAGGASGIGGGGWFFGTYPAREKGGSVNSRDDSILGRAEGWGMAGDFWGSGPGIGW
GSGRGSGGLGSQWPAPPTSLPPPRRYWSVDKLQMKCEKRSGSGSKSKGQRSRDRMPDGGS
CTCTQYGHGRPHIHHKQSSTQSHSQDDLLPHCHSFSGSSRPKPPPKPDKSKSGSQSNLSS
QQAQLSEHIPQTSPSPPQPLLPSLPVPSAPNSLPIPIPPPPSSASMSPPPVLSPGAASSS
SQAATASAKLQYQRLRSVPQPRRFYSPHLPLKAKSLCSRRGSAHFSSLESEV
NT seq
5919 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccttctttgtaccctcacgcttggcttcctcgtttattgccatggtcacagta
cccacactctctctgttattggccttggtacaatgggctggtcagagtagctcctcccct
catctcttgctccggccccgagagcgtgaacgggacccggtggcatcaatgcacttcaac
atcgcagtgatccatgcgggctcaacagttcaacaaggggaagcaggggctgcagcagct
gcgggcagggtcccataccctggcttcagacgtgtgcacagcagctttggtgagagtgtc
gttacccagtggggatctgcaaacgtaatctggctccaggtgaatgacagcagccccagg
acgctgctctctcagctgtgtgacttgctggcagccaggccccttcagggactcgtgtat
gaagatgagagacccctccctctggcctctggccccctggcccccatgctggagtttgtt
tcggcccagaccggcctccccatcgttgctgtgggagggggagcaggtctgggcagggta
ccacaggagaccggctcaatcttcctgcagttcagctcttccaccacgctccaactggag
gtgatctttgaggtgctggaggagtacgattggacggccttctcggtggtgtccacacgt
caccatggctaccaggacttcctgtcagtagtggaaggtttgaccgacgggtcattcatc
ggctgggagaagaagagcatagtgatgttgaatttaaccgatgacccaggaggagcacgt
gcacgacggctactgaaagagaacgaagcacaggtgcggttgttgtactgctctcaagag
gaagcagaacaggtgttccacgctgcttgggcagctggtcaggccagtgcctctcacata
tggttcgtagtgggtccggctctgtcagagctgggcctgaccggacttcccaatcgactg
tttgcggtcagaccgcagggctggagggacgaaccccgccgtcgtatcgcccgtggggtg
tccatccttacccacggagctgtagcattgcggaaagactatggagccactggagggcca
cactttgtcactaactgccagacagaaggcaacggaacacagaggattcgcggtagaatg
aagtatttcagtaacatcacactcggtgggcgggactattcgttcagtaatgagggctac
ctggccaatccctttctggatgtcatctcctacacgtctgggagtggctgggaagacgtg
ggatggtgggagaacggggtgttacgtctgcggtatcctgcttggtctagatatagcccc
ttcctgcagccgcccgatgatgctcagcacctgagggtcgtgaccctggaggaacggccc
ttcgttatcgtggagctagcagacccttcctctggaacctgcattagggactccgtgcca
tgcagacggcctctcaatgccagtgcacttcaagaaggggtggcacccatgaaacagtgc
tgcaaaggattctgcatcgacatccttaagcgactggccagaattgtcggctttacctat
gacctctacttggtgaccaatgggaaacatggaaaaaagattgatggagtttggaacggg
atggtgggagaggttgtgtacaagcgggcagacatggcgatcggctctctcactatcaac
gaggagaggtcagaggtcgtggacttctctgtgccctttgtggagacgggcatcagtgtc
atggtctctcgcagtaatggaaccgtgtctccctctgcatttcttgagccgtacagccct
gctgtgtgggtgatgatgtttgtaatgtgcctgaccgtggtggcagtgacggttttcatc
tttgagttcttcagtccagtggggtacaaccgtagccttcagagtggcaagaaggccgga
ggttctaagttcacaatagggaagtcaatctggcttctttgggctctggtttttaataac
tccgttccagtggagaaccccaaaggaaccactagcaagatcatggttcttgtctgggct
ttctttgctgtcatcttcctggctagctacactgccaacctggctgccttcatgatccaa
gaggaatacatcgacactgtgtctggtctcagcgataaaaagtttcagcaccccacagag
gagtacccccctctgaaatttggaactgtccctaacggaagcacagagaaaaacatccgc
agtaactatccagacatgcaccagtacatgatcaaatacaaccagaaaagtgtggaggat
gccatctcccacctcaagactggtaagctagatgccttgatctatgatgcggctgtattg
aactacatggctcgtaaagatgaaggctgtaaagtaatgaccatcggctcagggaaagtg
ttcgccacgactggttacggcatcgccctgatcaagaactcccgctggaaacggccacta
gacctggccttactgcagctggtgggcgacgatgagatcgagatgctagagcgtctctgg
ctctcagggatctgtcataatgataaaattgaggtgatgagctccaaactagacatagac
aacatggctggtgtgttctacatgctgctggtggccatgggcctaagtctgctggtcttc
gcctgggaacacctggtttactggaggctgcggcactgcatgagcaaaatgggccaatcc
ggcaaactggacttcctactggccttcagcaggggaatgtatagctgctgcagtattgaa
gatgaaactgcacaaggtgggactaaagtcacagttcctggacaccatcacactgccatg
gtccctgcttcttcctcacatgtggtcacttcagctgtatccactccagccattgccata
gtgcagcaacagcagcagcaaccacaacagcctcaaccttctcagtctcacaaaacacct
cttcctggatcccctcccacagttgttcattctggagcggccttgggtcccacaaatact
caacttgtaggagctccactaccatgcactactttcttaccccgtccagatcgcaggtta
gcggttgtggaccggtggagactacccaaaaccgctaatgccacaacctccatgggtgtg
agaggatgtctaacagaaacaggacccctaccccaaaaggtggcaccttcctgggcaagt
ggtggaggtacagcgagtggtctagatggatataagcgctactatggacctattgatcca
gagggacttgggccatgtgtggaccaacaaacaggctctcaaactccaaaaacagtcccc
agagcccaccaacaacccccaccaaccagtgtggctttctaccaggagaagagcatggac
catggtatgggaaagaaggtgggagtgggtactggtgcagggggtcagggtagaggggtt
aaatctctggggactcccaggcttcctccaaaaagccaggccccagcctcactgactcct
aaccccccactccagcacccctctccccctctcccttcatccttttggaggaaacggcga
ccaaaaaagcccaaagaacctggtggccctttgtacgagaacatcctgccactagtccgg
agaggtggaggcaggggtgcgagtcgaagaccgagaccctctccccctctccccatccct
gttcctgtcacactatccccaagctacactcctccatccccctctccctcattcccctat
acctccacatcatcctcatcatccaccaccagctcctcaaccacatcttctgccacatcc
tcacgctccacatctccttcatccacttccacagcttcatctcgcagcacccaagacaga
gaggctgaggaagaagatgaggatgatttggatgaactgaccgaagagtctagtcttctg
cagggccacaacagaaccagggaccgagagcggtccatactttcccctagatctttcact
catggacctccccctcctatacccccacgcaaaccgtggggcacctttggagatagggag
cataagaaggacagagaaagagaaaggggtggcagtcaactagcacaactccaggaatgg
tgggcaggatgggcagagagagagagggacagggagagaagtggtggagcccagggagat
acagaaaggaaaagagagaagaaacataggaaagacagagaaaaggagaaaaagaaaaag
aagaaaaacaaaaaacgaaaaaagagggaggagcgtgaaagagaaagagaaagagagagg
aagcgccacaaggtgaaaaagaagaaaaagaaggcaatgaaaaccaaaaagaagaagaag
gtgtcatccagcaagcggtctgagccagaggagggtgatgttgaggcagagagagatgga
gagggggatggggatagagaaggagagtacacatcattttccactcaatatcgcagtgca
tttgtggacaaaggcagcctttcagcttgggagggagagagagaaagagggaggagagat
ggaggtgaggacgatggggaagaacgagagaatgagagtgggggaggtagaggtagacag
agaagacccaaaagctcccattcgcgacaccagcaatccagtaaacgctatcccaacctc
aacaaactcccctcttcggttaaattctgggtcagtggaggtgaagcagttggcacagag
gtctccggaccctcccctccctcctctttacatacactcctctcctcatccaagagacgg
aggagtagtggggtagagagagaggtaaaagggagagtaggagaacgcaggccactgctt
ctccactatgaaagggggcgagttaacacaagagaaggcctgtccttccatgagtgggac
tctgaggatgaggaggaagaagaggaaagagagagagaacgagaaagggagagaatagag
gagagagtgcggcaggcaggaagaggtgcagtatccgaatctgagcgggatagaataaga
gcagaggaaagcttttctgatgaggggtcctcaggagagtttggccgttttgaaagatac
tgggaaggaactggagcgggtggagctagtggaattggaggtgggggctggttttttgga
acataccctgctcgagagaaaggtggaagtgtcaacagtagagatgactctattttgggt
cgggctgaaggatggggtatggcaggtgatttttggggttcgggtccaggaatcggatgg
ggatctggaagaggcagtggagggctgggttcacagtggcccgcccctcccacttccttg
ccacccccgcgacgctattggtctgtcgacaaactgcagatgaagtgtgagaagcgaagt
ggcagtgggtcaaagagtaaaggtcagaggtctcgggatagaatgccagatggaggatca
tgtacttgtacacagtatgggcatggtaggccccacatacaccacaaacagagcagcact
caatctcacagccaggatgatctgcttccccactgccacagcttcagtggaagctctcgg
cccaaaccaccccctaaacctgacaaatccaaatccggaagtcagtccaacctaagctcc
caacaagcccagctctcagaacacataccccagacatcaccctccccacctcagccactt
cttccctcattacctgtaccttctgctcccaactcccttcccatacccattcctccacct
ccatcctctgcatccatgtcccctccacctgtgctctctcctggggctgcttccagctcc
tcccaggcagccaccgccagtgctaaacttcagtaccagagacttcggtctgtgccccag
cccaggcgattctactccccacacctgcctctcaaagccaaaagcttgtgctcacgccgt
ggttctgcccatttctccagcctagagagtgaggtatga
DBGET
integrated database retrieval system
