KEGG   Colletes gigas: 122398349
Entry
122398349         CDS       T07492                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
cgig  Colletes gigas
Pathway
cgig03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgig00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122398349
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cgig03041]
    122398349
   04121 Ubiquitin system [BR:cgig04121]
    122398349
Spliceosome [BR:cgig03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    122398349
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    122398349
Ubiquitin system [BR:cgig04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    122398349
SSDB
Motif
Pfam: SART-1 HIND DUF4410
Other DBs
NCBI-GeneID: 122398349
NCBI-ProteinID: XP_043254047
LinkDB
Position
Unknown
AA seq 743 aa
MGSNKRHKTEKNRDAKKKRHRSRSRSYTPEREKTEKHRHHKKHRRKERKDYDSDVEIVNA
PPPPKISKSSHPSTPPPPEISKQRSPSPAKGGAAQTSLSIEETNKLRAKLGLKPLEVDST
SKDDPNKIKDDLGEFYHKPAPDVNEKLRTQKLKEKIGTQKQKRQIEANLSKVKSLAECDS
DDDTKAWIEKNRRLDEEKKKAEERAKMLDQLDEEFGIGNLVKEEIHTARNTAYTEKNLKG
LKVEHNIDKFEEGKIVILTLKDQQVLDESGDVLVNVNITDEERYQRNILNKAKKPGYDAY
DDDNFDEFGFSKNTILEKYDEEIEGQKRDNFVLGINMKDARQSKLDHVKQRLANKRLESL
QLAEPKLASEYFNEEELATFKKPKKKVRKIRKKLKADDLIPEGNDYLRDLGSRRSKRPED
VKENDNLDVDDLGAPAEDLSGIKLEEDDKELELQLALKKAQRLKESQLSTIEQVVETIKH
EPSGSEDSQSGNIVLNATAEFCRTLGDIPTYGLAGNREENGQELMDFEIDGVKEEPPVNE
EEDDGRGAWNTVQLDESTSEPVALEAAILDAEPSLGHGVSGALKLAMSKGYLQKEDSSRP
SASRFAHLQAQNYSIEDKTYGDDDKFGRRDRFNGPTSEFKEKDGFKPNVKLEYIDDDGHV
LSAKEAFRYLSHKFHGKGPGKNKVEKRMKKAEQEVLMKRMSSTDTPLGTLNLLQAKQKET
QSPYIVLSGSKQMQTTSISKSKH
NT seq 2232 nt   +upstreamnt  +downstreamnt
atgggttcgaacaaacgtcataaaaccgagaagaaccgggacgcaaagaagaagcgtcac
cgtagccgatcacgaagttatacgcctgaacgcgagaaaacggaaaagcacaggcaccat
aaaaagcatagaagaaaagagcgcaaggattatgacagcgatgtcgaaatagttaatgct
cctcctccgccaaaaatctctaagtcttcgcatccatctacacctccacctcctgaaatt
tccaagcaacgtagcccatcgccagccaaaggtggcgccgcacagacctctctatccatc
gaagagacaaataagttacgagcaaaattaggtttaaagccattggaagttgacagtact
tctaaagacgatcctaataagatcaaagatgatttgggagagttctatcacaagcctgct
cccgatgttaatgagaaactgaggacacaaaagttgaaggaaaaaattggcactcagaaa
cagaaaaggcaaattgaagccaatctgtccaaagtaaaaagtttggctgaatgcgactct
gatgatgatactaaagcttggatcgagaaaaacagacgtttggatgaggaaaagaaaaag
gcggaagaaagggcaaagatgttggatcagctggatgaggaatttggaattggaaatctg
gttaaggaagaaatacatactgctcgaaatacagcttatacagagaagaacttaaagggt
ctgaaagtagagcataatattgacaagtttgaagaaggaaaaatagttattttaactcta
aaagaccagcaagtattggacgagagcggcgatgtactcgtaaatgtaaacataacagac
gaggaacgttaccaacgcaatatattaaataaagctaaaaagcctggttacgatgcgtac
gatgacgataattttgacgagtttggtttttcgaaaaacactatcttggagaagtacgac
gaagaaattgagggccagaaaagagataatttcgtattaggaatcaatatgaaagatgcc
agacagtctaaacttgatcacgttaaacaacgtttggcaaataagcgattagaatcgtta
cagttagcggagccaaaattagctagcgaatatttcaacgaggaggaacttgcaacgttc
aagaaaccaaagaagaaggttcgaaagatcaggaagaaactaaaggcagacgatctgatt
cccgaaggtaacgattatcttcgagatctaggaagtaggagaagcaaacgacctgaagac
gtgaaagaaaatgataatttggacgtagatgacttgggagctcccgccgaggacctcagc
ggaataaaattagaagaagacgataaggaactagaattgcaactagcattgaagaaagct
caacgtttgaaagaatcgcaattgtcgactatagaacaagttgttgaaactataaaacac
gagccgtcaggttcggaggatagtcagtctgggaatatcgtccttaatgctactgcagaa
ttttgcagaactttgggagacattcctacctatggtcttgctggaaatagagaggaaaat
ggccaggaacttatggacttcgagatcgatggagtgaaggaggaaccaccggtaaatgag
gaagaagacgatggtcgcggcgcgtggaatacagtgcaattagacgagagcacatcggag
ccagtagcattggaagccgcaattctagacgcggagccttcccttggtcatggcgttagc
ggagcattaaagctcgctatgagcaaaggttatttacaaaaggaagacagtagtcgaccg
tctgcatcgcgttttgctcacttacaggctcaaaactactcgatagaggataaaacttac
ggagacgacgataaattcggcagaagagatcgtttcaatggtccaacctctgaatttaaa
gagaaagatggctttaaaccgaacgtaaagttagagtacatcgatgacgatggacacgtt
ctgagcgcgaaggaagcgttccggtatctttcgcacaaattccatgggaaaggtccggga
aagaacaaggtcgaaaagcgaatgaagaaagctgaacaggaagttttaatgaaacgtatg
tcctccacggacactcccctaggtacgcttaatttattgcaggcgaagcaaaaagaaact
cagtctccgtacatagtgctcagtggtagcaagcaaatgcaaacgactagtatatcgaag
tcaaagcattaa

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