Corynebacterium glutamicum ATCC 13032 (Kyowa Hakko): Cgl0141
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Entry
Cgl0141 CDS
T00102
Symbol
Cgl0141
Name
(GenBank) HrpA-like helicases
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
cgl
Corynebacterium glutamicum ATCC 13032 (Kyowa Hakko)
Brite
KEGG Orthology (KO) [BR:
cgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgl03019
]
Cgl0141 (Cgl0141)
Enzymes [BR:
cgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Cgl0141 (Cgl0141)
Messenger RNA biogenesis [BR:
cgl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Cgl0141 (Cgl0141)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
ResIII
AAA_11
Helicase_RecD
HA2_N
AAA_22
AAA_30
AAA_19
AAA_16
UvrD-helicase
AAA_25
ParA
Motif
Other DBs
NCBI-ProteinID:
BAB97534
UniProt:
Q8NU10
LinkDB
All DBs
Position
complement(153223..155613)
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AA seq
796 aa
AA seq
DB search
MSSRIGNFLINRISTGLPVENIIPHLQEAFSAGPKNLVIQAPPGTGKTTLLPPLVANILC
NEGAGNATPTKVLVTAPRRVAVRAAARRLAQLDDSQLGTKVGFSVRGEHISGSHVQFMTP
GVLIRQLLNNPELPGIGAVIIDEVHERQLDSDLLLGMLAELSQLRDDFSLIAMSATLDSD
KFANLLDAQVLSVEAPIFPLDISYAPARAPRLNAKGVDWDFLDHMAQKTHDAVTHSEHSA
LIFVPGVREIDRVMSTLKSLGHNNVFPLHGQLSPTEQDRALAPSQQQRIIVSTPVAESSL
TVPGVRIVVDSGLSRSPKRDSARGMTGLITSSCAQASAGQRAGRAGREGPGQIIRCYSEE
DFSHFPRFVTPEISSADLTQAALWLAQWGTSPADLPLLDQPPHAAWTAAQQILRLIGALE
GDAITSLGHRLSTLPLCPQLSASLLRFGEQSAKILAVVSENPQGDVEKQQPDKREVERLR
RLAPASVGKASAGQIVGAAFPQLIGRKIDNGEYLLASGTRARLMDSDLKDAEWISVAAIN
RSQNSAIIRAAARISEDDAIDIIGVVEETRAIFVNGKVQARKVKAAGAIELSSTPTKPTP
AEASETIATALAKGGIDLFHFSDKAASLRDRLKFIHEHRGEPWPDIETADPHLWLSPEIE
ALSHGTRLNNIDMYPALQRLLPWPEATNFEEFAPSHLSVPSGNQHRLDYSSGRPVIRVKL
QECFGLEESPQLCGIPVQFHLLSPAGRPLAVTDDLRSFWSGPYSQVRAEMRGRYPKHPWP
EDPWTAPATARTKNRM
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaagaattggcaattttcttataaatcgcatttccacgggcctgcccgtagaa
aatattatccctcacctgcaagaagctttttcggccggacctaaaaaccttgtcattcag
gcccctcccggcacaggaaaaacgacacttctccccccattagtagctaacatcttatgt
aatgaaggagcgggaaatgccaccccaaccaaggttttagtaacggcacctcgtcgtgtg
gccgtccgagcagcagctcgcagactcgcccaactagatgatagccagctcggaacaaaa
gtgggattcagcgtgcgtggtgaacatatttcaggctcccacgtgcaatttatgaccccc
ggtgtgttaatccgccagctcttaaacaacccagaattacccggcatcggcgctgtgatt
atcgatgaagtccacgaacgtcaactcgattccgatctactgctaggaatgcttgctgaa
ctcagtcaactgcgcgacgatttctccctcatcgccatgtccgcaaccttagattcagat
aaattcgcaaacttattagacgctcaggtccttagtgttgaagcaccgattttcccctta
gacatttcttatgctccagcccgcgcgcctcgcctcaatgcaaaaggtgtcgactgggat
ttcctcgaccacatggcgcagaaaactcacgatgcggtgacacattcagagcactctgca
ctcattttcgtcccaggtgtgcgtgaaattgatcgagtaatgagcacgctcaaatcgctc
ggccataataatgttttcccacttcatggccaactcagcccgaccgaacaagaccgcgcc
ctcgcaccgtcacaacagcagcgcatcattgtctccactcccgttgcggaaagctcccta
actgtgcctggagttcgcatcgtggtggattccggcctctcacgaagccccaaacgagac
tctgcccgcggcatgacaggactgatcaccagcagttgcgcgcaggcttcagcaggccaa
cgcgcaggtcgcgctggccgtgaaggaccaggacaaataatcagatgctattccgaagaa
gacttctcccacttcccacgatttgtgacaccagaaatcagctccgctgacctcacccaa
gcagccctctggctcgcccaatggggaacgtcacctgcggatttaccgcttcttgatcaa
ccccctcacgcagcctggacggctgcacaacagatcctgcgcctcatcggcgcgcttgaa
ggtgacgctatcacgagcctgggacatcgcttatcgacgcttcccctctgccctcaactc
agcgcttctctcctccgcttcggtgaacaatccgcaaaaatcttggcggtggtgtccgaa
aacccgcagggggacgtcgaaaagcaacaacccgacaagcgtgaagtggaacgccttcgc
cgtttggcacctgcgtcggttggaaaagcgagtgcggggcaaatcgtaggcgctgcattc
ccgcagctcatcggccgaaaaatagacaatggagaataccttttagccagtggaacccgc
gcacgcctcatggattcagatctcaaagatgccgaatggatctccgttgctgcaattaac
cgctcacaaaattctgccatcatccgcgccgccgcccgcatttcagaggacgatgccata
gacatcatcggagtcgtggaagaaacccgcgcgatttttgtcaacggaaaagtccaagcc
cggaaggtcaaagcagcaggcgcgatcgaattaagttccactccgacaaaaccaacaccc
gccgaagcctcggaaacaatcgccacagcccttgccaaaggcggaatcgacctattccac
ttctccgacaaagcggcatccttgcgtgaccgactgaaattcatccacgaacaccgtggc
gaaccctggccagatattgaaactgcggacccgcacctgtggttatctccagaaattgag
gcgctcagccacggaacacgactaaacaatatcgatatgtatcccgcactccagcgactt
ctcccctggcctgaagcaaccaactttgaagaattcgctccttcccacctatccgtaccc
agcgggaatcagcaccgactagattattcatcaggcaggccagttatacgagtgaaatta
caagaatgcttcggattagaagaatccccgcagctctgcggaatcccggtgcaatttcat
ctcctgtcacctgcgggaagacctcttgcagttaccgatgacctgcgtagtttctggtct
ggcccgtacagccaagtccgtgcagaaatgcggggccggtaccccaaacacccgtggccg
gaggatccatggaccgctcctgccactgcgcgcaccaagaatcgcatgtag
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