Cottoperca gobio: 115005093
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Entry
115005093 CDS
T07513
Symbol
casc3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
cgob
Cottoperca gobio
Pathway
cgob03013
Nucleocytoplasmic transport
cgob03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115005093 (casc3)
03015 mRNA surveillance pathway
115005093 (casc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgob03019
]
115005093 (casc3)
Messenger RNA biogenesis [BR:
cgob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115005093 (casc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
115005093
NCBI-ProteinID:
XP_029282753
Ensembl:
ENSCGOG00000015508
UniProt:
A0A6J2P9M1
LinkDB
All DBs
Position
Unknown
AA seq
775 aa
AA seq
DB search
MADRRRRRRRASQDSEDDDESGSGSDSVRSGSPTTKSRVRDPDPPEVTATRPEPKTKVES
ECESEDGVGEAVLSDYDSADPEETGSHSEGVEEEEEAEQYSDEEAPAAASEPKPSAAADG
PTKVEEEEAAEEEEEEEEEEDEEEKEEDEEKEEDEEKEGEGGGESKEDCKAEEKGNLAGE
RQSGDGQESTDDPETKAGGKPGQKLDDDEDRKNPAYIPRKGLFFEHDVRGHTQEEERPKG
RNRKLWKDEGRWDHDKFREEEQAPKSREELIAIYGYDIRNGGSSGDRPYRQRRPRQSLSP
SRDKRWRDGGERPVRSWQSGGGVNRGGAPPSSTSPSPVPLSSTQRSSNPARPPPPRSRPS
QPHQNQMHLPPQYRNNESNAPQMHPRERSGPKAQCDPGGDRGVVSRGGRGGGRAPSVVIE
DITVSQGGVREPDLSVVTTSQPGGYPSASPRRQHQEQRGSADRSSSDPSLQSPAAATNRE
ASPPTERPVERKSYSLARRTRSRPADLGSKQPSVEESAAGGNSSSPGGVGGKSWTSAGDG
SSQGGGGGLPELDQDVARLSLAGQSWSPNQTSYFRSEMRGLPNTMHLPGSPPHFSSIEEI
SVGSNRAKRYSSQRQRAAPEPAPPMHLGVMEGHYYEPMSYQGPIYAHGDGPAPIPPQGML
VQPEMHIPHPGLHPHQSGGPIANPALYGGPPVSLPPPGQPQQLLPPPFYPPPGVMTFPYP
TMYPTPQGQAQVTYGGVTYYDTMQQQAQPKPSPPRRTSQPVTVKPPPPELHFASE
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcgaaggaggaggcgcgcgtcccaggacagcgaggacgacgacgag
tccggttcgggttcggacagtgtgaggtcgggctctccgacgaccaagagtcgtgtgaga
gatcccgacccgccggaggtgacagcgacccgacccgagccgaagaccaaagtggagtcc
gagtgtgagagtgaagatggtgtcggagaagctgtcctctcggactacgacagcgctgat
ccggaggaaaccggctcccattcagagggagtggaggaggaagaggaggcagagcagtac
agtgacgaagaagctccagcagcagccagcgagcccaaaccctctgctgcagccgacggc
ccaacaaaggtagaggaggaggaggcggcggaggaggaagaagaagaagaagaggaggag
gatgaagaagagaaggaagaggatgaagagaaggaagaggatgaagagaaggagggagag
ggaggaggagagagtaaagaggactgcaaagccgaggagaaaggaaatcttgccggagag
agacagagcggtgacgggcaggagtctacggacgacccggagacgaaggcgggaggaaaa
cctggacagaagcttgacgacgacgaggaccggaagaacccggcctacatccccaggaag
ggactgttcttcgagcacgacgtcagaggacacactcaggaggaggagaggcctaaaggt
cgaaacaggaagctgtggaaggacgagggtcgctgggaccacgacaagttcagggaggag
gagcaggcaccaaagagccgcgaggagctcatcgccatctacggctacgacatcaggaac
ggcggcagctccggagaccggccgtaccggcagcgcaggccgagacagagtttgtctccc
agcagagacaaacggtggcgagatggaggagagcggcccgtccggtcctggcagagtgga
ggaggtgtgaaccgaggaggagctccaccctcctctacgtccccctcccctgtccctctg
tcctccactcagcggagcagcaatcccgccagaccacctcctccccgcagcagaccgtcc
caaccccaccagaatcaaatgcacctcccgcctcagtacaggaataatgaatcaaacgca
ccccagatgcatccgagagaacgatcgggccctaaagctcagtgtgatcccggaggagac
cggggggtggtcagcaggggggggcgtggaggggggagggcaccctctgtggtcattgag
gacattacagtcagccaaggaggcgttagggaaccggacctcagtgttgtaacgacgtca
cagccgggcggttacccgtctgcgtcaccgagacgacagcatcaggaacagcgagggagc
gccgacagatcttcctccgacccctccctacagtcgccggcggcagcgaccaatcgggaa
gcctctcctcccacagagcggccagtggagcgtaaatcttactcgctggctcgtaggact
cgctctcggcccgccgacctgggcagcaaacagccgtctgtggaggagtctgcagccggg
gggaactcatcctcccccggcggcgtgggggggaagagctggacgagtgcaggtgacggg
tcgagtcagggagggggggggggtctgccggagctggatcaggacgtggctcgactcagt
ctggcaggacagagctggagcccgaaccagacatcctacttccggtctgagatgagaggc
ctccccaacaccatgcacctccccggcagcccgcctcacttctccagcattgaggagata
agtgtcggctccaatcgggccaaacgctactcgtcccaacgtcagagagccgcgccggag
ccggcaccgcccatgcacctgggagtgatggagggacactactatgaacccatgtcgtac
cagggaccaatctacgcccacggggacggccccgcccccatcccgccgcaaggcatgctg
gtccagcctgagatgcacatccctcaccccggtctccatccccaccaatcaggcggcccg
attgctaaccccgccctctacggaggcccgcctgtttctctgccgccaccagggcaacca
cagcagctgctgccgccgcccttctaccctccgccaggcgtcatgaccttcccgtacccc
accatgtacccgactccacagggtcaggcccaggtgacctatggaggcgtgacgtactac
gacaccatgcagcagcaggcccagcccaagccctcgcccccccgccgcacctcccagccc
gtcaccgtcaagcccccccctccggagttgcacttcgcctcagagtga
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