Cottoperca gobio: 115025014
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Entry
115025014 CDS
T07513
Symbol
rfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
cgob
Cottoperca gobio
Pathway
cgob00514
Other types of O-glycan biosynthesis
cgob04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
115025014 (rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115025014 (rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cgob01003
]
115025014 (rfng)
Enzymes [BR:
cgob01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
115025014 (rfng)
Glycosyltransferases [BR:
cgob01003
]
Glycan extension
O-Glycan
115025014 (rfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
115025014
NCBI-ProteinID:
XP_029312833
Ensembl:
ENSCGOG00000019372
UniProt:
A0A6J2RPJ1
LinkDB
All DBs
Position
19:complement(794913..806086)
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AA seq
391 aa
AA seq
DB search
MKLLHWPVRMHIASVGVSKFCFLFSLAFCGLLLLLIPALQPPARQVDLPQPRPQVRPAQA
GVSVHAENTESATELNRSSAVQGRPIKTEGTRNDFQSPKSGTDSKKGALPRVSGPWDLLE
FKDIFIAVKTTRKYHKSRLELLIQTWVSQAKEQTFIFTDGEDKELRMRTGVNIINTNCSA
AHTRQALCCKMSVEYDKFIESQKKWFCHVDDDNYVIMPSLLQLLSSYHHSQDVYLGRPSL
DHPIEAAERVKSDGSVSVKFWFATGGAGFCISRGLALKMSPWASLGNFISTAEKIRLPDD
CTIGYIIEALLEVTLTHTHLFHSHLENLQKLPTDTVLEQVTLSFGGFENRRNVVGIVGGF
SLAEDPTRFKTVHCLLYPDTTWCPQLQHING
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgctccattggcccgtcaggatgcacatagcttcagtgggtgtcagcaagttt
tgcttcctgttctccctcgcattctgcggtctcctgcttctgctcattcctgctctccag
cccccagcacgccaggtggacctgcctcagccccgaccccaagtcagacctgcacaggca
ggagtgtctgtccatgcagagaacactgagtctgccacagagctgaataggagctcagca
gtgcaggggagacccatcaagactgaagggaccaggaatgacttccaaagtcccaagagt
gggacggactccaaaaaaggagctctccctcgagtttcagggccgtgggacctgttagag
tttaaggacatttttattgcagtaaagactaccaggaagtaccacaagtccagactggag
ctgctgattcagacctgggtttcccaagctaaagaacagaccttcatattcactgacggt
gaggacaaggagctccggatgagaacaggcgttaacatcatcaacacaaactgctcagca
gctcacacccgacaggctctgtgctgcaagatgtctgtggagtacgataaattcatcgag
tctcagaaaaaatggttctgccacgtggatgatgataactatgtgatcatgcccagcctg
ctgcagctgctctcgtcctaccaccacagccaggatgtctacctcggccggcccagtctg
gatcatcctatagaggctgcagagagggtgaagagtgacggatcggtatctgtaaagttc
tggtttgccacaggtggagcagggttctgtatcagcagaggcctggcactgaaaatgagc
ccatgggccagtttggggaatttcatcagcacagcagagaagatccgactaccggacgac
tgcaccatcggctacatcatcgaggcactactggaggtgaccctaacacacacacacctc
ttccactctcacctggagaacctacagaaactgcccactgacactgtgctggagcaggtg
actctgagcttcggaggctttgagaacagaagaaatgtggtcggcattgttggaggcttt
tcactggctgaggaccccacaaggtttaagacggtccactgccttctgtatccagatacc
acctggtgtccacagctccaacacataaacggatga
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