Cottoperca gobio: 115025529
Help
Entry
115025529 CDS
T07513
Symbol
trpa1
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgob04040
]
115025529 (trpa1)
Ion channels [BR:
cgob04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115025529 (trpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
PKD_channel
Amdo_NSP_1-3
Motif
Other DBs
NCBI-GeneID:
115025529
NCBI-ProteinID:
XP_029313718
Ensembl:
ENSCGOG00000013883
UniProt:
A0A6J2RRZ2
LinkDB
All DBs
Position
20:complement(8601870..8618831)
Genome browser
AA seq
1126 aa
AA seq
DB search
MDFSREVARQTSCYTYVIEDEDPALAKLDVFELAEKGDLALLENLVRKSPEVLSEKDECG
ASPLHHAAAGNHIALIQCITSVIDSQGLNSCDEQGNVPLHWAVERNKADSCRALLDLGAD
PNILNMALLSPLHLAVSLGHNKLVELLLSYSATNCNLQGDLENTPVILACSINNYEALST
LIKHGAFLCKQNKLGHFPVHAAAFAGAKRALQVILKAGTKSGHEIEAHINYLDKANSSPL
HLAVRGGNIEAIAFCIATGAKVDQQQHDRSTPLHLACTQGATEVVKLMLSSVDQVEDIIN
LTDGACQTPLHRATVFDHIELAEYLISLGADLNSIDCKGNSPLLLATSCAAWRTVALLLS
KGANVNMRDRCGCNFLHLAILQPKGLKNVPEEVLQLGGVKALLSCEDNEGCTPLHYACRL
GVHDSVKNMLGLSGQVGLACKSKDKKSALHFAAQYGRINTCQRLLETITDSRLLNEGDER
GLTPLHLASRGGHTKVVQLLLRKGALFHSDYKGWTCLHHAASAGYTQSMEILLSANLKLL
DKTDEDGNTALHIAAREGHVVVVRLLLESGAMLTLNKNDMSFLHEALQNMRKDVVNAVID
SDRITESLMLFKPGSSRGCAILGMIEFLPESYKHLMDRCVIESDDDHNSPDYHIEYSFKW
LQAPIAMMKLTDKTMRVQPLAALNVMVKYNRMELLNHPVCKKYLAMKWFAYGSTAHVLNM
FLYLLGLLPLTHLIVNLRPSLNATDKAEHSIVMVNASFREQSTFVSICMGMVLVMNIYFI
LKELVQISQQRWSYFKDYSNQSDWFSAIFSLLFIIPTMLNTVGSLHWQAGALAVLSSWIG
FLLYLQRFEGVGIYVVMFWEIMRTLFRIVMIFMYLVLAFGLAFHALMLNQKEFDTVPLSV
IQTFVMMVGELNYQNNFLDSYLKHELPFAPLTFIIFVSFVLLMPILLVNLMIGLAVGDIA
EVQRNAALKRIGMQIELHTALEDKLPYWFMKRVDKPSITIYPNRHCSGNSIKQLFTGDEE
PHDAWSRQQIKSQHCSVLENELKKQKSRMKEVSSMMEKQHNLLKLIIQKMEITSEENEYD
GPVNIRGNMWRSLSQVKPGGRQSRWVPLMKALESKKPEDWEKKKTS
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggacttcagcagggaggtggcccggcagaccagctgttacacatatgtgatcgaggac
gaggatccagcgctggcaaaactggatgtattcgagttggcagagaagggtgacctggct
ctcctggagaacctggtgaggaagagcccagaggtgctgagtgagaaagatgaatgtgga
gcgagtccccttcatcacgccgccgcaggaaaccacatcgccctcatccaatgcatcacg
tctgtcatagactcgcagggtctgaacagctgtgatgagcagggcaacgtgccgctccac
tgggcggtggagaggaacaaggcagatagctgcagggctcttctggacctgggggccgac
cccaacatcctcaacatggccctcctgtcccctctgcacctggctgtcagcctcggacac
aacaagctggtggagctactgctgtcctacagcgctacaaactgcaatctgcagggagac
cttgagaacaccccagtgatactcgcctgctccatcaataactacgaggctctcagcaca
ttgataaagcatggagcgttcctctgcaaacagaacaagctcggccatttccccgtgcac
gcagctgccttcgcaggtgcaaagagagccctgcaagtgatcctgaaggccggaacgaag
tcgggtcacgaaattgaagctcacatcaactatttagacaaggcaaacagcagtccgctc
catctggctgtacgtggcgggaatatcgaggccatcgctttctgcatcgctaccggggcc
aaagttgaccagcaacagcacgacaggtccacaccgcttcacctggcctgcactcaggga
gccactgaggtggtcaaactgatgctgtcctccgtcgaccaagtggaagacatcatcaac
ctgactgacggggcgtgtcagactcctctgcacagggctacagtatttgaccacatagag
ctggccgagtacctaatttctctgggtgcagacctgaacagcatcgattgtaaaggaaac
tctcctttactgctggctacgagctgtgcagcgtggaggactgtggctctgctgctgtcc
aaaggggcaaatgtgaacatgagagacagatgcggctgtaacttccttcacctggccatt
ctccagcccaaaggtctgaaaaatgtcccagaagaagtattgcagcttggcggtgtgaag
gctctgctgagctgtgaggataatgaggggtgcaccccgctccactacgcttgcaggctg
ggtgtccatgactcagtgaagaacatgctcggcctctcggggcaggtcggcctcgcatgc
aagtccaaggacaaaaagtctgcgctgcactttgctgctcagtatggccgcatcaatacg
tgtcagcgattactggagaccatcacagactctcgcctgctgaatgaaggtgacgagcga
ggcctgacaccgctccatttggcctcaagaggggggcacaccaaggtggtgcagctgttg
ctgcgcaaaggagctctctttcacagtgattataagggctggacatgtctgcatcacgct
gcatctgcaggatacacacaaagtatggaaattctcctgtcagcgaatctcaagttactg
gataaaaccgatgaggacgggaacactgcactgcacatcgcagccagagagggacacgtg
gttgtggtccggctgctgctggaaagcggagcaatgctcaccttaaacaagaacgacatg
tcgttcctccacgaagctctgcaaaacatgaggaaagatgtggtcaatgctgtgattgac
agcgacagaattactgaatctttgatgctgttcaaacccggctcgagccgcggatgtgcc
atactaggcatgattgagtttctgcctgagagctacaagcacctaatggaccgctgtgtg
atagaatctgatgacgaccacaacagtcctgactatcatattgaatacagtttcaaatgg
ctccaagctccaattgcgatgatgaagctgaccgataagaccatgagggttcagccgctc
gctgcactcaacgtgatggtgaagtacaaccgcatggaactcctcaaccaccctgtctgc
aaaaagtacctcgcgatgaagtggtttgcttacgggagcacggcccacgtgctcaacatg
ttcttgtacctgttggggctgctgcccctcactcacctgatcgtgaatctgaggcccagt
ctgaacgccaccgacaaggccgagcacagtatcgtcatggtgaacgcatctttcagagag
cagagcacgttcgtgtccatctgcatggggatggtcttggttatgaacatctacttcata
ctgaaggagttggtgcagatatcacaacagcgctggagttacttcaaggattattccaac
cagagcgactggttttctgccatcttctccctcctcttcatcatccccaccatgctcaac
acagtgggctctttgcactggcaggccggagctctggcagttttaagctcctggattgga
ttcctgctttatctccagaggtttgagggtgtcggcatctatgtggtgatgttctgggag
atcatgaggacactgttccgtattgtgatgatcttcatgtacctggtgttggcgttcggc
ttggcgttccacgctctgatgctcaaccagaaagagttcgataccgtgccgctgtcagtc
atacaaacctttgtgatgatggtcggggaactcaactaccaaaacaacttcctggactcc
tatctgaagcacgagcttccttttgctccgctgactttcattatttttgtgtcctttgtt
ctgctgatgccgattctgctggtgaacctgatgatcggtttagcagtaggagacatcgca
gaagtgcaaagaaatgctgccctgaaaagaatcggcatgcagatcgagcttcacacggcg
ctggaagacaagctgccgtactggttcatgaaacgagtggacaaaccctccatcaccatc
taccccaaccgccactgctccgggaactctatcaagcagttattcacaggtgacgaggag
ccgcacgacgcctggagtcgccagcagatcaaatcccagcactgcagcgtgctggagaac
gagctcaagaaacagaagagcaggatgaaggaggtgtcgagcatgatggagaagcagcac
aacctgctgaagctcatcatccagaagatggagatcacgtcggaggagaacgagtacgac
ggccccgtgaacatcagaggcaacatgtggcgcagcctgagtcaggtgaagcccggagga
cgccagtcgcgctgggtcccgctgatgaaggctctcgagagcaagaaacccgaagactgg
gagaaaaagaaaacgtcttaa
DBGET
integrated database retrieval system
