Cottoperca gobio: 115025932
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Entry
115025932 CDS
T07513
Symbol
cxcr4
Name
(RefSeq) C-X-C chemokine receptor type 4
KO
K04189
C-X-C chemokine receptor type 4
Organism
cgob
Cottoperca gobio
Pathway
cgob03250
Viral life cycle - HIV-1
cgob03260
Virion - Human immunodeficiency virus
cgob04020
Calcium signaling pathway
cgob04060
Cytokine-cytokine receptor interaction
cgob04144
Endocytosis
cgob04672
Intestinal immune network for IgA production
cgob04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115025932 (cxcr4)
03260 Virion - Human immunodeficiency virus
115025932 (cxcr4)
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
115025932 (cxcr4)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115025932 (cxcr4)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115025932 (cxcr4)
09142 Cell motility
04810 Regulation of actin cytoskeleton
115025932 (cxcr4)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
115025932 (cxcr4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cgob04030
]
115025932 (cxcr4)
04050 Cytokine receptors [BR:
cgob04050
]
115025932 (cxcr4)
04090 CD molecules [BR:
cgob04090
]
115025932 (cxcr4)
G protein-coupled receptors [BR:
cgob04030
]
Rhodopsin family
Chemokine
CXC Chemokine
115025932 (cxcr4)
Cytokine receptors [BR:
cgob04050
]
Chemokine receptors
CXC Chemokine
115025932 (cxcr4)
CD molecules [BR:
cgob04090
]
Proteins
115025932 (cxcr4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
CXCR4_N
7TM_GPCR_Srsx
SFXNs
COX2_TM
Motif
Other DBs
NCBI-GeneID:
115025932
NCBI-ProteinID:
XP_029314207
Ensembl:
ENSCGOG00000005904
UniProt:
A0A6J2RXM8
LinkDB
All DBs
Position
21:10102723..10104795
Genome browser
AA seq
380 aa
AA seq
DB search
MEPGIWNDIIFENSTDNISEDSGDFELDFQEPCGRALSKNFNKIFIPTVYGIIFILGVIG
NGLVVIVMGYQKKVKTMTDKYRLHLSVADLLLVLTLPFWAVDAASSWYFGGFLCVSVHVI
YTVNLYSSVLILAFISLDRYLAVVRATNSQATRKLLASKLIYVGVWLPAAVLTIPDLVFA
RVQNTGSSSFLIFDESMETADSRILCQRIYPQDTSFTWSVVFRFQHILVGFILPGLVILI
CYCIIINKLSRGTKIQALKKKALKTTVILIVCFFSCWLPYCLGLFVDTLMMLEFPPGFTP
SCDLQQAVEKWISITEALAYFHCCLNPILYAFLGVMFKKSARSALTASSRSSQKVTLMTK
KRGPISSVSTESESSSVLSS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggagcctggaatttggaatgacataatcttcgaaaacagcactgacaacatctcagag
gattctggagactttgagctggacttccaggagccatgtggcagagctctcagcaaaaac
ttcaataagatcttcataccaacagtttacggaattatatttatcctgggagtcattggc
aatggattagtcgtcattgtcatgggctaccaaaaaaaggtcaaaacgatgacggacaag
taccggctccatctctccgtggctgacctcctgttggtcctcacgctgcccttctgggcc
gtggatgcagccagctcctggtactttggaggtttcctctgtgtgtctgtgcatgtgatc
tacacagtgaacctatacagcagcgtgttgatcctggccttcatcagtctagacagatac
ttggcagttgtgcgggccaccaacagtcaagccacaaggaagctgcttgcgtccaaattg
atctacgtaggtgtgtggctgcctgcagctgtgctgactatacctgacctggtgtttgcc
agggtgcaaaacacagggtcgtcaagcttcctaattttcgacgaaagcatggagacggca
gactccaggatcctctgccagcgcatttacccacaggacaccagtttcacatggtcagtg
gttttccgcttccagcacatcctggtgggcttcattctgcccggtctggtcatcctcata
tgctactgcatcatcatcaacaagctgtcgcgaggcaccaagatccaggctctgaagaag
aaagcgctgaagaccacagttatcctcatcgtttgttttttctcctgctggctgccctac
tgtcttggcctctttgtggacaccctgatgatgctggaattcccacctgggttcactccc
agctgtgatttgcagcaagcggtggagaagtggatttctatcacagaggcgctggcctat
tttcactgctgcttaaaccccatcctctatgctttcctgggagttatgttcaagaaatca
gccaggagtgcactgacagccagcagccgatcaagtcaaaaagtgacactcatgacaaaa
aagagagggccaatttcatccgtgtccactgagtctgagtcctcaagtgttttgtcaagt
taa
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