Cottoperca gobio: 115028450
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Entry
115028450 CDS
T07513
Symbol
utp20
Name
(RefSeq) LOW QUALITY PROTEIN: small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgob03009
]
115028450 (utp20)
Ribosome biogenesis [BR:
cgob03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
115028450 (utp20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20_C
CDC45
Motif
Other DBs
NCBI-GeneID:
115028450
NCBI-ProteinID:
XP_029318097
Ensembl:
ENSCGOG00000016470
UniProt:
A0A6J2S8H2
LinkDB
All DBs
Position
23:complement(10389382..10409511)
Genome browser
AA seq
2809 aa
AA seq
DB search
MKIKSKSSYHKSENTYKFLTFAERLANVNIDVIHRIDRTGSYEEEVETYFSEGLTKWRDL
NLTENFTTFLKEVSNHSQSFNMLVFHQKSIVESLKMHLAVKNSLAYQPLLDLVVQLARDL
QTDFYPHFPDFFILITSLLDTKDTEVLEWAFTCLSYLYKYLWRLMVKDMTNIYSLYSTLL
EHKKEHIRKFAAESFSFLMRKVPDLDALLSHVFSDLQQHPDKAEGAGLLIFEMCKGVRNM
FHSCAANALPVVLRKLGPSTNPEAVLPWDTVKDALDHMAQAAANHVEREHFLVLWESLQL
TVLEVLSVMEAKGEDAEQATDQLERLLFILHTLVSHKDGAKVTKPEAVCQTMLRLVQSSS
LSESCSRLLLQIASSVLLGENITLPRALVQDTVQKVFGSTMGQDLILEFTKEMFTMKHFE
QLFLPSLLRFTAGLFGCGDLRSRHCGLDALVSLILSKAPSPTDGSMAFETYPLLFTGQTT
GVFSCKEAASEQPAVPELVLSLIQGCEGQNQPITDLSLPWAAVVLLPHLRPIDAACVVPA
VTALLNRLLCEIETENLGKAGLFVASQALSCLLTLDGSVQLLSLVTVDKINAILRKFPTD
LSALLLGDLYYTRLSLSGVSEHLSHGALLELHQILHANLSSNISKIRLLTLRILSQFEAE
LPPQTEGEENVEVQPVFAVCLQAELVPASVQDYRDKLLHLRKLRHDLVQRSLPQGPPGSF
QQVPLRYLIAMLFVNFKPLWDAVIELVVSHARGMDNKDFWRVYHEQLEMVAGLAEKELQE
DGEEEESSGVQGEPGCDVIESGDVGVLFLEQLKSTSNPNDRTDFPNFRSLLWRCMTQFPE
RVEPRSRELSPLLLRFIRNEFYFTDLLVAPTQDLRKVNDAALEESGMEDEEEEEEQEAEE
GGRQQRKALPKRAAAKELIAHLKVFTKFTNPRSLYLESSLSELYNQLLCHQDQQIQRVAL
ECVLTYKDSNIVPYKENLEKLLDDKHFKEEIVHFNISEETEVVDASHRAKLIPLLMRILF
GRLRSKAGSKFQGKASAASRSSIILRFLAGCQAEELGIFIDLLLEPVRHHSQGSCLSAVE
KAVSETDVGAVLPLGRQHSLLNIINVVIQKLGHLIHIYLPKVLQILLCVTASVSTVLDKR
EQLRPGCISPLKNLRRLGILRIQDFFDGFDSYNFSGDELDAVFQAVIWPQVCRLPTESPY
SPTPLLKLIHVWCKNARYYPLLAKQRPNQPECDVLLNVFALLSAKKVSTVTIAMVMDIAE
SLATTEDFVGSEAETELHVNSCVFPQPKEGALVTADSLNQGSSVLLPHISTLLQYLSGVV
RNSDRLKKKKFRVQVAKELNILSKVSRFVSDKEQSSVLISLLLPYLQKGHNPQETEIDTL
ATVQNLLRQCVQPSAFLRPLSKLFSVIHNKLPRMALTNVFQTLSDLDPSLTYITDLTTKL
NAFDSRHLDEIHFDVRLTAFQGATRRVKDMTTLDLDYISIIMHNCFHTFEIGDMSLGDNA
NLCLSAVITQLAAVGAGEQLYKDIVQHTILDAVHKGLRSKTDSVQHEYTTVLACLVKTFP
AKKEFRDLVQLTNYNDLESDFFEHMKHIQIHRRGRALRKFAKQLTEGQVAMTPRSLQNYI
MPYAMTALLDEKMLKHENMISASVEVVGAVCRKLTWSKYLYYLKHFIHILQTSQVEQKLA
VSLLITVLDAFHFDHQTLSREMEAAKAREAESVAVDDEEQAAADETDASDDEEAMEVDGK
TAQSDVPMETDTSSGDKGVVCKKAASAGAKGPAAPQPIAVAGLPQSREELETLISAIHLT
VNNSVLPRLHKCLNAKIKRDDEHKAVKSKDVKEEEVARIPIAFAMVQLMQTLPPNIMEVN
LPGILIKVCVVLRNLFQEVRDVARGTLVKIIETLGCKYLQYLLKEMQGLLAKGYQVHVLT
FTVYQLLTVLSPTLKSGDLDPCMNMLIDIFNNELFGPVAEEKEVKGIVSKLMEARHSKSM
DSYELLARFCSKESVTKFILPLKEMLENSATLKVCIRVGAVLRRMVLGLLVNEGMTSQDI
LLLCHGLISQSLPLLTNRDREKASIKPPPDPRLPPPSCLLLLPTPKRGGRKALVSSRTNM
HILVDTGLKLLHLSLKKSKVTSSDASALQMLDPFVLLLLECLDSMHVKVITEALVAFTWL
LKFPLPAVEQNADQLTKLLFVLLKDYSKAGAARGENYQLVQNCFKAITILVKNVKSNQIS
ETQLQVLLGYAEEDIYDQSRQATAFGLLKAILSRKLIVPEMEEVMKKVAKLSVTGSNAVI
RIHCRQIYLKYLLDYPLGRKLREHMDFVVAQLHYEHDTGRESVLEMLAYIFQTFPQNLLL
QHSGLFFAPLALVVVNDDSARCKKMAAMAIKALLSQLDLNHQNILYSLVCTWLNAEKASL
RRLGAQICGLFVEVEEEKFGRRLDDLLPLLEKEINPDNYEDIEEEQDERGADRLLFSFLT
LITKLSKHCSLLELNKPRDTLARIWGHIEAHLRYPHCWVWLTSSQLFGQLFAAHPAEQLV
AVWRGEGXEASPQSPATAFISSSLDKKMRELALSFCHQLQSKFLDTPSGEQVIKNLLFVG
KVIYLVSPESDVTAPQEEVKEEEEDDKEEKEEEEEDDKEGEKEEEEEEEEEEEDVKDDRP
PSMLWLMKKLSLMAKREAAYTPKVHLKRTCVFKFLGAMAMDLGKERLGPYLTTIITPLYR
ELDSSYADQDPTLKNLAQELIELLKRHVGLEIFSLAFSGVQKEFSQRRAARKQHRAIQAV
ANPDIAAKKKLKKHKNKIEAKKRKIEFLRPGYKAKKHRSHALKDLAMVK
NT seq
8430 nt
NT seq
+upstream
nt +downstream
nt
atgaagattaaatccaagtcttcgtatcacaaatctgagaacacctacaagtttctcact
tttgctgaaagacttgccaatgtcaacattgatgtcatccatcgtattgacaggactgga
tcttatgaagaggaagtagaaacatacttctccgaaggactgacgaaatggagagacctc
aacttgaccgagaatttcaccacctttttgaaagaggtttccaatcacagccagtcattc
aatatgctggttttccatcagaagtccatagtggagagtctgaagatgcacctggctgtc
aagaacagtctggcctaccagccactgctggacctggtggtgcagctggccagagacctg
cagactgacttctacccccacttccccgacttcttcattctgatcacctccctgctggac
accaaggacacagaggtcctggagtgggctttcacctgtctctcctacctctacaagtac
ctgtggaggctcatggtgaaggacatgaccaacatctacagtttatacagcacactgttg
gagcacaagaaggaacacatccgcaagtttgcagcagagagcttctcttttttgatgaga
aaggttccagatctggacgccctgctgagtcacgtgttctcagacctgcagcagcacccc
gacaaggcggagggagcaggtctactgatcttcgaaatgtgcaaaggagtccgaaacatg
ttccactcctgcgctgcaaatgctctccctgtagttttgcgtaaactcggaccctccacc
aacccagaagccgttctgccgtgggacactgtcaaggatgctctggatcacatggcccag
gctgcggccaatcacgttgaaagagaacacttcctggttttgtgggagtccttacagctc
actgtgttggaggttctgagtgttatggaggcgaaaggagaagatgcagagcaggccacc
gatcagctggagaggctgctgttcattctacacaccctggtgtcccacaaggacggagcc
aaagtcaccaagccggaggccgtctgccagacgatgttgcggctggtgcagagctcgtct
ctgtcggagtcttgttcccgtctgctcctccagatcgcctcctctgtgctcctcggggag
aatatcactctgcccagagcactcgtccaggacacggtccaaaaggtgtttggcagcaca
atggggcaggatctgatcctggagttcactaaggagatgttcaccatgaaacactttgag
cagctcttcctccccagcctgttgcgcttcaccgctgggttgttcggctgcggagacctc
cggtctcgccactgtggcctggacgcgctggtcagtctaatcctctccaaagccccgtct
cccacagacggctccatggcctttgaaacgtaccctctgctcttcaccggacagaccaca
ggagtgttcagctgtaaggaggcagcttcagagcagccagcggtgccggagctggtgctg
tcgctgatccaaggttgtgaggggcagaaccagcccatcactgacctgtcactgccctgg
gccgcagtggtgctgctgccacacctcaggcccatcgatgcagcctgtgtggttccagct
gtgactgcgctcttaaaccggctcctgtgtgagattgagacggagaacctggggaaagct
ggtctgtttgtagccagtcaggcgctgagctgcctcctcactctggacggctccgtccag
cttctctcgctggtcactgtggacaagatcaacgcaattctacggaagtttcccacagac
ctctctgccctgctgctaggagacctgtactacacccgcctgtcactcagcggcgtttcg
gagcacttatcccacggcgcactgctggagctccaccagatcctgcacgccaacctctcc
tccaacatctccaagatccgcctgctgactctgaggattctctctcagtttgaggcagag
ctccctccacagactgagggtgaggagaatgtggaggtgcagccggtgtttgcagtttgc
ctgcaggctgagctggtcccagcttcagtgcaggactacagagacaaactgcttcacctc
cggaagctgaggcacgacctggtgcagcgcagtctgcctcaggggccgcccggctccttc
cagcaggtgcctctgcgttacctcatcgcaatgctgtttgtcaacttcaagcctctgtgg
gacgcagtcattgaacttgtcgtgagccatgccagagggatggacaacaaggacttctgg
agggtctaccatgagcagctggagatggtggcaggactggctgaaaaagaactccaggag
gacggcgaggaggaggagtcgtcgggtgttcagggcgagccgggctgtgacgtcattgaa
agcggggacgtgggagtgctgttcctcgagcagctgaagtcgacctccaaccccaacgac
aggacggacttccccaacttccgcagcctgctgtggcgctgcatgacccagttccccgaa
agagtggaaccacgcagccgggaactgagtcctctgctgctccggttcatcaggaatgag
ttttacttcaccgacctgctggtggcccccactcaggacttgaggaaggtgaacgacgcg
gcactagaggagtctgggatggaggacgaggaggaggaagaggagcaggaggcagaggag
ggaggcagacaacagaggaaggctcttccaaagagagctgctgccaaagagctgattgcc
catctgaaggttttcaccaaattcaccaaccctcgctctctctacctggagagcagtctc
agtgagctctacaaccagttgctctgccatcaggaccagcagatccagcgagtggctctg
gaatgtgtcctcacatacaaagactccaacatagttccatacaaggagaatcttgaaaag
ctactggacgacaaacacttcaaagaggagattgtccatttcaacatttctgaggagaca
gaagtggttgatgcttcacacagagccaaactcatcccactgctcatgaggatcctgttc
ggccgtctgcgcagtaaagcaggcagtaagttccaggggaaggcgagcgccgcctcccgg
tcctccatcatcctgcgcttcctggccggctgccaagctgaggagctgggaatattcatc
gacctgctgctggagcccgtccgccatcacagccaaggttcgtgcctgtcagcggtggag
aaagccgtttctgagactgacgtgggggccgtgctgccgctgggccgacagcacagcctg
ctgaacatcatcaacgtggtgatccagaaactgggccacctcatccacatctacctgccc
aaggtgctgcagatcctgctgtgtgtcaccgcctctgtgtccactgtcctggacaaaagg
gaacagctgcgcccaggttgcatcagtcctctgaagaacctgcggcgactcggcatcctg
aggatccaggacttttttgatggctttgactcgtacaacttcagtggagacgagctggac
gccgtctttcaggctgtgatctggcctcaggtgtgtcgtctccccacagagagcccctac
tcccccacccctctgctgaaactcatccacgtgtggtgcaagaacgccaggtactatccc
ctcttggccaagcagaggcccaaccagccggagtgtgatgtcctcctgaatgtcttcgcg
ctcctctcggccaagaaagtttccacagtgaccatcgccatggtaatggacattgccgag
tccctagcaaccactgaagactttgtcggctcagaggcggagacagagctgcacgtcaac
agctgtgtgttcccgcagcctaaagagggcgctctcgtcactgcagactctttgaatcag
ggctccagcgtgctgctgccgcacatctccaccctgctgcagtacctcagcggagtcgta
cgcaactccgaccggctcaagaagaagaagttcagggtgcaggtggccaaagagctcaac
atcctctccaaggtcagtcgctttgtgagcgacaaggagcagagctcagtgctcatcagc
ctgttgctgccctacctgcagaaaggacacaaccctcaagagaccgaaatcgacaccctg
gccacagtgcagaacctgctgcgacagtgtgtgcagccctccgccttcctgcggccgctc
agcaaactcttctccgtcatccacaacaagctgccccggatggccctcactaatgtcttc
cagactctgtcagatctggatccttcactcacgtacatcacagatttaacaacaaagctc
aacgcgttcgacagtcgacacttggatgagatccactttgacgtgcgcctgacggccttc
caaggagccaccaggcgagtcaaagacatgacgactctggacctggactacatcagcatc
atcatgcataactgcttccacacctttgagatcggtgacatgtcgctgggagacaacgcc
aacttgtgtctgtctgcagtgatcacccagctggctgcggtcggggctggagaacagctc
tacaaggacatcgtgcaacacactatcctggacgctgtacacaaggggcttcgcagcaag
acagatagtgtgcagcatgagtacaccaccgtgctggcctgcctggtgaagacctttcct
gccaagaaagagttccgagacctggtgcagctcaccaactacaacgacctcgagtctgac
ttctttgagcacatgaagcacatccagatccaccgtcggggtcgtgccctgaggaagttt
gccaagcagctgaccgagggccaggtggcgatgacgcctcgttctctccagaattacatc
atgccgtacgccatgaccgccctgcttgatgaaaagatgctcaagcatgagaacatgata
tcagcgtcggtggaggtcgtgggcgcagtgtgccgcaagctgacctggtccaagtacctc
tactacctgaaacacttcatccacatcctgcagacatcgcaggtcgagcagaaactggct
gtcagtttgctgatcacagtcctggatgctttccatttcgaccatcagaccctcagcaga
gaaatggaggctgccaaggcccgagaggctgagagtgtcgcagtcgatgacgaggagcaa
gctgcggccgacgaaacggacgcgagcgatgatgaggaagcaatggaggtagacggtaag
accgctcaatctgatgtccccatggaaacagacacctccagtggagataagggtgtcgtc
tgtaagaaggcagccagcgccggagccaaggggccggcggctcctcaacccatcgcagtg
gccgggctgccgcagagcagagaggagctggagactctgatcagcgccatccacctgacg
gttaacaacagcgtgctgccgcgcctgcacaagtgtctcaacgcaaagataaagcgcgac
gatgagcacaaggcagtaaagtcaaaggatgtgaaggaggaggaggtggcgaggatacca
atcgccttcgccatggtccaactgatgcagacgctgccaccaaacatcatggaggtcaac
ctgcctggaatcctgatcaaggtgtgtgtggtgctgaggaacctcttccaggaggtccgt
gacgtggcgaggggaactctggtgaagatcatcgagactttaggctgcaagtatctgcag
tacctgctcaaagagatgcaggggctcctggcaaagggctaccaggtccatgtgctgacg
ttcacagtataccagctgctgacagtcctcagtccaaccctgaagagtggtgacctcgac
ccgtgcatgaacatgctcatcgatatcttcaacaacgagctgttcgggcctgtggccgag
gagaaggaggtgaaggggatcgtctccaagctgatggaggctcgacacagcaagagcatg
gactcctacgagctgctggcccgcttctgcagcaaagagagcgtcaccaagtttatattg
cccctgaaggagatgctggagaattcagccactctgaaggtgtgtatccgggtgggtgcc
gtgctgcggcgaatggtcctgggtctgctcgtcaacgagggcatgacctctcaggatatc
ttgctgctgtgtcacggcctgatcagccagagtctgccgctgctcaccaacagagaccga
gagaaggcctcaattaagccccccccggaccccagactgccccctcccagctgcttgctc
ctgcttcccactccaaagagggggggtcgcaaagctctggtcagcagccggaccaacatg
cacatcctggtggacactggcctcaagctgctccatttgagtctgaagaaatccaaagtg
acgtcgtccgacgcctcggctctgcagatgctggatcctttcgtgctgctgctgctcgag
tgcctggactccatgcacgtcaaggtgatcacagaggctctggtggcgttcacctggctg
ttgaagttccctctcccagcagtggagcagaacgcagaccagctgaccaagctgctcttt
gtcctgctgaaggattactccaaggccggagccgcccgcggggagaactaccaactggtc
cagaactgcttcaaggccatcaccatactggtgaagaatgtgaagagcaaccagatctca
gagactcagctgcaggtgctgctgggatacgccgaggaggacatctatgaccagtctcgc
caggccaccgccttcggcctgctgaaggcaattctgtcgcggaagctcatcgttccagag
atggaggaggtgatgaaaaaggtggccaagctctctgtcaccggcagcaacgctgtgatc
agaatccactgtcgacagatctatctaaaatacctgctggactacccactggggaggaag
ctgagggagcacatggacttcgtggtggctcagctgcactacgagcacgacacgggccgg
gagtcagtgctggagatgctggcctacatcttccagactttccctcagaacctgctgctg
cagcacagcggcttgttcttcgccccgctcgccctggtcgtggttaacgatgactcagca
cgctgtaagaaaatggccgctatggctatcaaggctctgctctcccagctggacttgaac
caccagaacatcctgtactccctcgtctgcacatggctgaatgcagaaaaggccagcctg
cggcgtcttggggctcagatttgcggtctgttcgtggaggtggaggaggagaagtttggc
cgtcgcctggacgacctgctgcctctgctggagaaagagataaaccccgacaactacgaa
gacatcgaggaggagcaggacgagaggggagccgacaggctgctcttcagttttctgact
ctcatcaccaaactgagcaaacactgcagcctgctggagctcaacaagcctcgcgacaca
ctcgctcgtatctggggtcacattgaagcccacctgcggtaccctcactgctgggtgtgg
ctgacctcctcgcagcttttcgggcagctgtttgcagcccatccggccgagcagctggtc
gctgtttggagaggagagggangagaagcttcccctcagtcaccagccacagccttcatc
agcagcagcctggacaagaagatgagagagttggcgttatctttctgccatcagctgcag
tccaagttcttagacacgccgtcaggagagcaggtgatcaagaacctgctgttcgtcggc
aaggtgatctacctcgtgtcccccgagtctgacgtcactgcccctcaggaagaagtgaag
gaggaggaggaagatgacaaggaagagaaagaagaagaggaggaagatgacaaggaaggg
gaaaaggaagaggaggaggaggaggaggaggaggaggaagatgtcaaggatgaccggcct
ccttccatgctgtggttgatgaagaagctgtcgctgatggccaagagagaggcagcgtac
actcctaaagttcacctgaagagaacgtgtgtgtttaagttcctgggagcgatggccatg
gacctggggaaagaacgcctcggcccctatctgaccaccatcatcactcctctgtacagg
gagctggacagcagctacgcagaccaagaccccaccctgaagaacctggcacaggagctg
atagagctgctgaagagacacgtggggctggagatattctctctggccttctctggtgtc
cagaaggagttttcacagaggcgagcagcacgcaaacaacacagagccatccaggcggtg
gctaaccccgacatcgcagccaagaagaaactcaagaagcacaagaacaaaatcgaagca
aagaagaggaagatcgagttccttcggcccggatataaagccaagaagcaccggagccac
gcgctcaaagacctggccatggtgaagtga
DBGET
integrated database retrieval system
