KEGG   Nakaseomyces glabratus: CAGL0I03410g
Entry
CAGL0I03410g      CDS       T01024                                 
Name
(RefSeq) uncharacterized protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
cgr  Nakaseomyces glabratus
Pathway
cgr03030  DNA replication
cgr03410  Base excision repair
cgr03420  Nucleotide excision repair
cgr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cgr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CAGL0I03410g
   03410 Base excision repair
    CAGL0I03410g
   03420 Nucleotide excision repair
    CAGL0I03410g
   03430 Mismatch repair
    CAGL0I03410g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cgr03032]
    CAGL0I03410g
   03400 DNA repair and recombination proteins [BR:cgr03400]
    CAGL0I03410g
Enzymes [BR:cgr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CAGL0I03410g
    6.5.1.6  DNA ligase (ATP or NAD+)
     CAGL0I03410g
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     CAGL0I03410g
DNA replication proteins [BR:cgr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    CAGL0I03410g
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     CAGL0I03410g
DNA repair and recombination proteins [BR:cgr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     CAGL0I03410g
   NER (nucleotide excision repair)
    Other NER factors
     CAGL0I03410g
   MMR (mismatch excision repair)
    Other MMR factors
     CAGL0I03410g
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-GeneID: 2889175
NCBI-ProteinID: XP_447396
UniProt: Q6FQU8
LinkDB
Position
I:complement(289606..291780)
AA seq 724 aa
MFSRLAPPIRFISARIIKEPTRPLIVMKRQATLARFFSSVKKDADGDKKGEQADVKTAAV
DLNSHEVDANKSPLKKMKLESTGSLTATKNGNQGKEEHEGTPIASTPRQVDSKFFCKVPY
SDLCNLFEEIEGTSSRLAIIKLCSDFFIKIMKEDPQNLIPVTYLFINKLGPDYEPGLELG
LGENLLMKTISESCGKSMQQIKNQYREIGDLGQIALEARNVQPTMFKPKPLVVGEVFENL
KTIAKSQGKDSQTKKMKLIKRMLTACQGTEAKFLIRSLESKLRIGLAEKTVLIALSKALL
IHDEKYSNKEPSMDVVEQAEQKIRDAFCQVPNYELVINACLDYGIMKLDEHCTIQPGIPL
KPMLAKPTKAINEVLDRFQGQTFTSEYKYDGERAQVHLLKDGTMRIYSRNGENMTERYPE
IQIKDFLADPASTTSLILDCEAVAWDKEQNKILPFQVLTTRKRKDVNINEVKVRVCLFAF
DILLHNDMRLINEPLSKRREVLHEVTKPVEGEFQYATQMTTSNLDELQKFLDESVKNSCE
GLMVKMMDGVESYYEPSKRSRNWLKLKKDYLEGVGDSLDLCVLGAYFGRGKRTGTYGGFL
LGCYNADSEDFETCCKIGTGFSEEMLQTLYEKLSPTVIDGPKGTYVFDSSAEPDVWFEPT
MLFEVLTADLSLSPIYKAGSSVYDKGISLRFPRFLRIRDDKSVEDATSSEQIIEMYQNQS
HVAN
NT seq 2175 nt   +upstreamnt  +downstreamnt
atgttttcaaggttggcaccacctatccgttttatcagtgcaagaattataaaggagcct
acgagaccattgattgtgatgaaaagacaagctacgttggccaggtttttcagttctgtg
aagaaggacgccgatggggacaagaaaggtgagcaagctgatgtgaagaccgcagcggtc
gatttgaacagtcatgaagtggacgcgaacaagagtcccttaaagaagatgaagctggag
tccacaggttctctgacagctacgaagaacggcaatcagggcaaggaagagcacgaaggt
actccgattgcaagcactcctcgccaagttgactctaagtttttttgcaaggtgccttat
tctgacttgtgtaacttgtttgaggagatcgagggcacttcttcccgtttggcaattatc
aagctatgttctgacttcttcatcaagataatgaaggaggacccacagaatcttatccca
gtgacgtacttgtttattaacaaactgggccccgactatgagcctgggttggaattgggt
ttaggtgaaaatctgctgatgaagacaattagtgaatcatgcggtaaatcaatgcaacag
ataaaaaaccagtacagagaaattggtgatctcggtcaaattgctctcgaggccagaaat
gtgcaacctacaatgttcaaacctaagccactggtagtgggtgaggtattcgaaaacctg
aagactatcgcaaagtctcaaggtaaagattctcagacaaagaagatgaaactgattaaa
agaatgttgacagcgtgtcaaggtactgaggcaaaattcttgatcagatctctggaatcg
aagttaagaattggtctggctgaaaaaaccgttttaattgcactttcgaaggcattactg
atacatgacgagaaatacagcaataaagagccctcgatggacgttgtcgaacaagctgag
caaaagattcgagacgcattttgtcaagttccaaactatgaattggttattaatgcatgc
ttagattacggcattatgaaacttgatgaacattgtactatacaacctggtatcccatta
aaacctatgcttgcaaagcctacaaaggcaattaatgaagtgttagatagatttcaagga
caaacttttacatcggaatataaatacgatggtgaaagagctcaagttcatttgctaaaa
gatggtaccatgagaatttactccagaaatggtgaaaacatgactgaaagatatccagaa
attcaaatcaaggattttttggcagatccggcatcaactacatcattaattcttgattgt
gaagcagtcgcttgggataaagaacaaaataaaatactaccatttcaagtcttgaccaca
agaaaaaggaaggatgttaatattaatgaggtgaaagttcgtgtgtgtctgtttgctttc
gatattttattgcataatgacatgcgcctgataaatgagccactgagtaaaaggcgggag
gtattgcatgaggtaacaaaaccagttgaaggtgaattccaatatgcaacacagatgacc
actagtaatcttgacgaattacagaaattcttagacgaatcagttaaaaattcttgtgaa
ggtttgatggttaagatgatggatggtgttgagtcatattacgaaccaagtaaacgttcg
agaaattggttgaaattgaaaaaggactatcttgaaggtgttggtgattctctagattta
tgtgtgttaggggcctattttggtagaggtaaaagaacgggtacctatggtggtttttta
cttggttgttataatgctgacagtgaggattttgagacttgttgtaaaataggtacaggt
ttttcggaagaaatgctacaaacactatatgaaaagctatcgcccactgttattgatggc
ccaaaaggtacgtatgtgtttgactcaagtgcagaaccggacgtatggtttgaaccaaca
atgctattcgaagtattgactgctgatctgtcactatcaccaatctacaaagcaggtagc
tctgtttatgataagggtatatccttgagatttccgcgttttctaagaatcagagatgat
aaatctgttgaggacgctacatcatcagaacagatcatagaaatgtaccaaaatcaaagt
catgtagctaattaa

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