Corynebacterium glaucum: CGLAU_04775
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Entry
CGLAU_04775 CDS
T05058
Name
(GenBank) Putative DNA ligase-like protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
cgv
Corynebacterium glaucum
Pathway
cgv03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cgv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CGLAU_04775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgv03400
]
CGLAU_04775
Enzymes [BR:
cgv01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
CGLAU_04775
DNA repair and recombination proteins [BR:
cgv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
CGLAU_04775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
AQQ14929
UniProt:
A0A1Q2HVQ4
LinkDB
All DBs
Position
944040..946424
Genome browser
AA seq
794 aa
AA seq
DB search
MAQQSTKVRVDGHDLKVSSLDKVLYPATGTTKADVMRYYLEVADVMVPQIARRPVTRKRW
PDGVDKQSFFRKDLEDSAPSWITTGEIEHKTSTNTYPLVDGPAVLAWFAQVAALELHTPQ
WRFGKGDSKQNPDRLVLDLDPGEGVTLAETAEIALACNEVLDGMGLVSVPVTSGSKGIHI
YAGLDGETDAAGVSQVAKALAQALEEEYPERVTAVMRKTERAGKIFLDWSQNNGNKTTVS
PYSLRGRERPTVAAPRTWEEIAEPGLKHLVFEEVIERVQEGLDPIAALGGGETAAPGGDR
LTTYRSMRDATKTGEPVPEAAPRPRDGVPIFVIGEHHARRLHWDFRLEHDGVLVSWAVPK
GPPLDPKENRLAVQTEDHPIEYAWFEGTIPKGQYGAGDVKIWDIGTCEIEKWRDDEIIAV
LFGRDDGGLGGVPRRFALIRTDAEENHWLLKFMKRQPDEATPAPGELEAPEPAPAEPAPA
DTAPADFAPATPPKPMLATAGTKADIDLAVKDGATFAFEMKWDGYRIIADTRAGTTRLIS
RNGKDYTSLFPHIEEFEQLLVDATVDGELIALDEDGRPSFSALHGADKHGSTEGVELRYM
AFDLLRLGERDLTGEPYTQRHKALEALGESDHIVVPPAYTGSFKSAWRVAEEMGLEGVVA
KQTSSVYEPGERSRAWLKIKRALHQAVVVVGVREGKSLLVAVPDEDGELAYAGRVGTGFS
AGQFAEIEKKLRRSKRKTPPVDVPKSDTEGVFWVTPKYVAEVALAGATGGRKVRQASWRG
WREDLDPSEVRWEV
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcagcaaagcacaaaagtgcgcgttgacgggcacgacctaaaggtcagcagcctc
gacaaggtgctctacccggccacaggcaccaccaaggccgatgtcatgcgctactatctc
gaggtcgccgatgtcatggtgccccagatcgcgcgccggccggtgactcgaaaacgctgg
ccagatggcgtcgataagcaaagcttcttccgaaaagacctggaggattctgctccgagc
tggatcaccaccggggagatcgagcacaagacctcgacgaacacatatccgcttgtcgac
ggcccagccgtgcttgcttggttcgcccaagttgccgctcttgagctgcacaccccgcag
tggcgcttcgggaagggcgattcgaagcagaacccggatcggctggtgctggatcttgac
ccgggcgagggcgtgacgctcgcggagactgccgagatcgcgctcgcgtgcaacgaggtg
ctcgacggcatgggtctggtcagcgtgccggtgacgtccgggtcgaaaggcattcacatc
tacgcggggttggatggggagaccgatgcggcaggcgtgagccaggtggcgaaggcgctt
gcgcaggcgctggaggaggaatacccggagcgcgtgacggccgtgatgcgcaagacggag
cgcgccgggaagatcttcctcgactggagccagaacaacggcaacaagacgacggtgagt
ccgtactcgttgcgcggccgggagcggccgaccgtggcggcgccgcggacgtgggaagag
atcgcggagccggggctgaagcacctcgtgttcgaggaggtgattgagcgcgttcaggag
ggtctagatccgattgctgcgctcggaggtggggagacggctgctcccgggggcgaccgc
ctgaccacctatcgctccatgcgagacgcgacgaagaccggcgagcctgtgcccgaggcc
gcgccgcgtccacgcgacggggtgccgatcttcgtgatcggcgagcaccacgcgcgccgc
ctgcactgggatttccgccttgagcacgacggggtcctcgtctcctgggccgtgccaaag
ggccctccgctggatccgaaagagaaccgcctcgcggtgcagaccgaggaccacccgatc
gagtacgcctggttcgaaggcacgattccgaagggccagtacggcgcgggggatgtgaag
atctgggacatcggcacctgcgagatcgagaagtggcgcgacgacgagatcatcgccgtg
ctcttcggccgcgacgacggcggcctcggcggggtcccgcgccgcttcgcgctgattcgc
accgatgcggaggaaaaccactggctgctgaagttcatgaagcgccagcctgacgaggcc
acgccagcgccgggcgagcttgaggcgccggagcccgcaccggctgagcccgcgcccgcc
gacacggcacccgccgacttcgcgccggccacgccaccgaaacccatgctcgccaccgcc
ggcaccaaagccgatatcgacctggccgtcaaagacggcgccaccttcgcgttcgaaatg
aagtgggacggctaccgcatcatcgccgacacccgcgccggcaccacccgcctgatcagc
cgaaacggcaaggactacacctcgctcttcccccacatcgaggagttcgagcaattgctt
gtcgacgccaccgtcgacggcgagctcatcgccctcgacgaggacggacgccccagtttc
tctgcgctgcacggcgcggataagcacggcagtaccgagggagtcgagctgcgctacatg
gcctttgatcttctgcgtctcggggagcgcgacctcaccggtgagccgtacacgcagcgt
cacaaagctttggaagcgctgggggagagcgaccacatcgtggtgcctcccgcctatacg
ggcagcttcaaatctgcttggcgggtggctgaggaaatggggttggaaggggtcgtcgca
aagcaaacaagctctgtgtacgagcctggggaacgaagccgcgcgtggctgaagatcaag
cgggcgctgcaccaagcggtggtcgttgttggggtgcgtgagggcaagtcgctgctggtg
gcggtgccggatgaggacggcgagctggcgtacgccgggcgggtgggcaccgggttttct
gccgggcagttcgccgagattgagaagaagctgcggcgcagcaagcgaaaaacgcccccg
gtggacgtgccgaagtctgataccgagggcgtgttctgggtgacgccgaagtacgttgcc
gaggtcgcgcttgcgggcgcgactgggggcaggaaggtacgccaggcgtcgtggcgcggg
tggcgcgaggacctcgaccccagcgaggtgcgctgggaggtctag
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