Chromobacterium haemolyticum: CH06BL_13250
Help
Entry
CH06BL_13250 CDS
T06734
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
chae
Chromobacterium haemolyticum
Pathway
chae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CH06BL_13250 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chae03019
]
CH06BL_13250 (pnp)
03016 Transfer RNA biogenesis [BR:
chae03016
]
CH06BL_13250 (pnp)
Enzymes [BR:
chae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CH06BL_13250 (pnp)
Messenger RNA biogenesis [BR:
chae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CH06BL_13250 (pnp)
Transfer RNA biogenesis [BR:
chae03016
]
Prokaryotic type
tRNA degradation factors
CH06BL_13250 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
eIF-1a
KhpA-B_KH
Motif
Other DBs
NCBI-ProteinID:
BBH12077
UniProt:
A0A2T5NTT3
LinkDB
All DBs
Position
1434781..1436925
Genome browser
AA seq
714 aa
AA seq
DB search
MFNKITKSFQYGRHTVTLETGEVARQASGSVIVTVEDTVVLVSVVGGKNVKPGQDFFPLT
VDYLERTYAAGKIPGGFFKREGKQSEKEVLTSRLIDRPIRPLFPEGFFHDVQIVATVMSL
NPEVDSDIPAMIGASAALAISGLPFAGPIGAARVGYANGEYILNPTRTELAASEMDLVVA
GTERAVLMVESEAKELPEAVMLGAVVFGHEQMQAAIKAINELADEVNPVMFDWAAPVANE
ELIAQVRAIAGEQLANAFRLRQKQARTVAINEAWDAVKSSLITENTDTLKANEIKGIFKG
LEAEIVRGQILAGEARIDGRDTRTVRPISIRNNVLPRTHGSALFTRGETQAMVVTTLGTK
QDEQIIDALAGEYTERFMLHYNFPPYSTGEAGRMGPPKRREIGHGRLAKRALVAVLPPES
EFGYSMRVVSEITESNGSSSMASVCGGCLSLLSAGVPLKAHVAGIAMGLILEGNRFAVLT
DILGDEDHLGDMDFKVAGTAAGVTALQMDIKIQGITKEIMQVALDQAKEGRMHILGLMKE
AVDGPQELSAHAPRLYVMKINPDKIREVIGKGGETIRSITKDTGCEINIEEDGTITIASI
SNEGAEAAKKRIEEITVEVEVGKVYEGTVVKILDNNVGAIVSILPGKDGLVHISQIANER
IKNVADYLKEGQVVKVKAIEMDDRGRIRLSIKALLEEEAKTAQATADSFGLKTQ
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaataaaatcactaagtctttccagtacggccgtcataccgtgactctggaaacc
ggcgaagtcgcacgccaggcgtccggctccgtcatcgtcaccgttgaagacaccgtggtg
ctggtctccgtggttggcggcaagaacgtcaagccgggccaggacttcttcccgctgacc
gtggactacctcgagcgcacctacgccgcaggcaagatcccgggcggcttcttcaagcgc
gaaggcaagcagtccgagaaggaagtgctgaccagccgcctgatcgatcgtccgatccgc
ccgctgttcccggaaggcttcttccacgacgtgcaaatcgtcgccaccgtgatgtcgctg
aacccggaagtggattccgacatcccggcgatgatcggcgcttccgccgctctggccatt
tccggcctgccgttcgccggcccgatcggcgccgcgcgcgttggctacgccaatggcgaa
tacatcctgaacccgacccgcaccgagttggccgcctccgaaatggacctggtggttgcc
ggtaccgagcgcgcggtgctgatggtggaatccgaagccaaagaactgccggaagccgtg
atgctgggcgccgtggtgtttggccacgagcaaatgcaagccgcgatcaaggccatcaac
gaactggccgacgaagtgaacccggtgatgttcgactgggccgctccggtcgccaatgaa
gagctgatcgcccaagtgcgcgccatcgccggcgagcaactggccaacgctttccgcctg
cgtcagaagcaagcccgcaccgtggcgatcaacgaagcctgggacgcggttaagtccagc
ctgatcaccgaaaacaccgataccctgaaggccaatgagatcaagggcatcttcaagggt
ctggaagctgagatcgttcgcggtcagatcctggccggcgaagcccgcatcgacggtcgc
gacacccgcaccgtgcgcccgatcagcatccgcaacaacgtgctgccgcgcacccacggt
tccgcgctgttcactcgcggcgaaacccaagccatggtggtgaccaccctgggcaccaag
caggacgagcagatcatcgacgcgctggccggcgagtacaccgagcgcttcatgctgcac
tacaacttcccgccgtactccaccggcgaagccggccgcatgggcccgccgaagcgccgt
gaaatcggccatggccgcctggccaagcgcgcgctggtagccgtgctgccgccggaatcc
gagttcggttactcgatgcgcgtggtgtcggaaatcaccgaatccaacggctcctcgtcg
atggcttccgtgtgcggcggctgcctgtcgctgctgtccgccggcgtgccgctgaaggcg
cacgtggctggtatcgccatgggtctgatcttggaaggcaatcgcttcgcggtgctgacc
gacatcctgggcgatgaagatcacctgggcgacatggacttcaaagtcgccggtaccgcc
gcaggcgtgaccgcgctgcagatggacatcaagatccagggcatcaccaaggaaatcatg
caggtggcgctggatcaggccaaggaaggccgcatgcacatcctgggtctgatgaaggaa
gccgtggacggcccgcaagagctgtccgctcacgctccgcgtctgtacgtgatgaagatc
aacccggacaagatccgggaagtgatcggcaagggcggcgaaaccatccgctccatcacc
aaggacaccggctgcgagatcaacatcgaggaagacggcaccatcaccatcgcttcgatc
agcaacgaaggcgcggaagccgccaagaagcgcatcgaagagatcactgttgaagtggaa
gtgggcaaggtgtacgaaggcaccgtggtcaagatcctcgacaacaatgtaggcgccatc
gtgtctatcctgccgggcaaggatggtctggttcacatttcccagatcgccaacgagcgc
atcaagaatgtggccgactatctgaaagaaggccaggtagtgaaggtcaaggccatcgaa
atggacgaccgcggccgcatccgcctgtccatcaaggccctgctggaagaagaagccaag
accgcgcaggcgactgccgattccttcggtctgaaaacccagtaa
DBGET
integrated database retrieval system
