KEGG   Clupea harengus (Atlantic herring): 105890093
Entry
105890093         CDS       T09045                                 
Symbol
ubc
Name
(RefSeq) polyubiquitin-C
  KO
K08770  ubiquitin C
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03320  PPAR signaling pathway
char04120  Ubiquitin mediated proteolysis
char04137  Mitophagy - animal
char04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    105890093 (ubc)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    105890093 (ubc)
   04137 Mitophagy - animal
    105890093 (ubc)
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    105890093 (ubc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:char04121]
    105890093 (ubc)
Ubiquitin system [BR:char04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   105890093 (ubc)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5 Dsc3_N OTU1_UBXL
Other DBs
NCBI-GeneID: 105890093
NCBI-ProteinID: XP_012671522
UniProt: A0A6P3VGG1
LinkDB
Position
12:complement(10891485..10893896)
AA seq 381 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGN
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagaccctgactggcaagaccatcacccttgaggtggagcccagt
gacactattgagaatgtcaaggctaaaatccaggacaaagagggcatcccccctgaccag
cagcgtctgatcttcgccggcaagcagttggaggatggtcgtaccctatccgactacaac
attcagaaggaatccacccttcatcttgtgctgcgcctccgtggtggtatgcagatcttc
gtgaagaccctgactggcaagaccattacccttgaggtggagcccagtgacaccattgaa
aacgtgaaggccaaaatccaggacaaagagggcatcccccctgaccagcagcgtctgatc
ttcgccggcaagcagttggaggatggtcgtaccctatccgactacaacattcagaaggaa
tccaccctccatcttgtgctgcgcctccgtggtggtatgcagatcttcgtgaagaccctg
actggcaagaccattacccttgaggtggagcccagtgacaccattgagaacgtgaaggcc
aaaatccaggacaaagagggcatcccccctgaccagcagcgtctgatcttcgccggcaag
cagttggaggatggtcgtaccctatccgactacaacattcagaaggaatccaccctccat
cttgtgctgcgcctccgtggtggtatgcagatcttcgtgaagaccctgactggcaagacc
attacccttgaggtggagcccagtgacaccattgagaacgtgaaggccaaaatccaggac
aaagagggcatcccccctgaccagcagcgtctgatcttcgccggcaagcagttggaggat
ggtcgtaccctatccgactacaacattcagaaggaatccaccctccatcttgtgctgcga
ctccgtggtggtatgcagatcttcgtgaagaccctgactggcaagaccattacccttgag
gtggagcccagtgacactattgagaacgtcaaggctaaaatccaagacaaagagggcatc
ccccctgaccagcagcgtctgatcttcgccggtaagcagttggaagatggtcgtacccta
tccgactacaacatccagaaggaatccaccctccatcttgtgctccgtctccgtggtggc
aactga

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