Clupea harengus (Atlantic herring): 105890093
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Entry
105890093 CDS
T09045
Symbol
ubc
Name
(RefSeq) polyubiquitin-C
KO
K08770
ubiquitin C
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03320
PPAR signaling pathway
char04120
Ubiquitin mediated proteolysis
char04137
Mitophagy - animal
char04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105890093 (ubc)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105890093 (ubc)
04137 Mitophagy - animal
105890093 (ubc)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
105890093 (ubc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105890093 (ubc)
Ubiquitin system [BR:
char04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
105890093 (ubc)
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Dsc3_N
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
105890093
NCBI-ProteinID:
XP_012671522
UniProt:
A0A6P3VGG1
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Position
12:complement(10891485..10893896)
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AA seq
381 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGN
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagaccctgactggcaagaccatcacccttgaggtggagcccagt
gacactattgagaatgtcaaggctaaaatccaggacaaagagggcatcccccctgaccag
cagcgtctgatcttcgccggcaagcagttggaggatggtcgtaccctatccgactacaac
attcagaaggaatccacccttcatcttgtgctgcgcctccgtggtggtatgcagatcttc
gtgaagaccctgactggcaagaccattacccttgaggtggagcccagtgacaccattgaa
aacgtgaaggccaaaatccaggacaaagagggcatcccccctgaccagcagcgtctgatc
ttcgccggcaagcagttggaggatggtcgtaccctatccgactacaacattcagaaggaa
tccaccctccatcttgtgctgcgcctccgtggtggtatgcagatcttcgtgaagaccctg
actggcaagaccattacccttgaggtggagcccagtgacaccattgagaacgtgaaggcc
aaaatccaggacaaagagggcatcccccctgaccagcagcgtctgatcttcgccggcaag
cagttggaggatggtcgtaccctatccgactacaacattcagaaggaatccaccctccat
cttgtgctgcgcctccgtggtggtatgcagatcttcgtgaagaccctgactggcaagacc
attacccttgaggtggagcccagtgacaccattgagaacgtgaaggccaaaatccaggac
aaagagggcatcccccctgaccagcagcgtctgatcttcgccggcaagcagttggaggat
ggtcgtaccctatccgactacaacattcagaaggaatccaccctccatcttgtgctgcga
ctccgtggtggtatgcagatcttcgtgaagaccctgactggcaagaccattacccttgag
gtggagcccagtgacactattgagaacgtcaaggctaaaatccaagacaaagagggcatc
ccccctgaccagcagcgtctgatcttcgccggtaagcagttggaagatggtcgtacccta
tccgactacaacatccagaaggaatccaccctccatcttgtgctccgtctccgtggtggc
aactga
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integrated database retrieval system