Clupea harengus (Atlantic herring): 105893228
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Entry
105893228 CDS
T09045
Name
(RefSeq) cohesin subunit SA-2-like isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
105893228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105893228
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
105893228
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
STAG
SCD
TFIIA
Motif
Other DBs
NCBI-GeneID:
105893228
NCBI-ProteinID:
XP_012675063
Ensembl:
ENSCHAG00000007405
UniProt:
A0A6P8FM31
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Position
8:986511..1007455
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AA seq
1278 aa
AA seq
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MIEAQELQSDYHFPQEADTQLSSDTDFEDPEGYNAKLGKAKGVKQGRKGAGEKGKGSGGK
SGGQNRVNGHHHENGMENLSLFEMVKMGKSAMQSVVDDWIESYKNERDTALLELINFFIQ
CSGCKGAVSSEMFRHMQNSEIIRKMTEEFDEDSGDYPLTMSGPLWKKFKSNFCEFIGVLV
RQCQYSTIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDN
TQRQYEAERNKAIAKRSGERVELLFQKRKELQENQDEIENMMNAIFKGVFIHRYRDAIAE
IRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDKQGEVRLKCLAALQGLYYNRELNSR
LELFTSRFKDRIVSMTLDKEYDVAVQAVKLLTLVLQSSDEILTSEDWESVYHLVYSAHRP
LAVAAGEFLYKKLFSNRSTEEEGMLRRGRQSRNANLIKTTVFFFLESELHEHGAYLVDSL
WDCASDLLKDWESMISLLLDEPFPGEEELTDRQETALVEIMLCAVRQSCECHPPVGRGTG
KRVLTAKEKKSQLDDRTRITEMFAVALPLLLAKYAVDAAKLTNLLQLPQYFDLEIFTTGR
LEKHLESLLRQIREVVEKHTETDVLEACSRTFHALSNEEYTIFNRVDIARSQLLDEQVDK
LNSLLEDYLQEGEENDEDDAYQVLSTLKRITAFHNAHDLSRWDLFTNLYRLLNTGLQNGD
MPQQIVINALQCTHFSILWQLAKVSKGTAKQSDMVNLRKQMRAFCLMCQRYLTSVNTSVK
EQAFTILCDVLMVFSHQIVSSGREALEPLIYSPDSSLQAEVLSFIQDHVFVYQDEEINTD
DQRYDEVWKIEALHKRRNLLAAYCKLIIYNVVEMSMGADIFKQYMRYYNDYGDIIKETMS
RTRQIDKIQCAKTLILSLQQLFNEMLTEFGCIVDRSSAAFCGIKELARRFSLTFGLDQVK
TRDAIAMLHKDGIEFAFKEPSPQGEGNPPLHLTFLDILSEFSSKLLRQDKKTVHLYLERF
MTFQMALQREDCWMPLISYRNSLQAGADDDTMSVISGISSRSSTRSRKSKAPSVSSKRKL
PEADEGSCSSTDAAMWLNREQGAQTPVMMPLPHLTSTVLREPKKLRQEEAYVYAMANEHQ
HQHQQQHQQQAPLTPQSQPQPTMDYNTQVTWMMAQRQQAEARQQHERASMHYAKMRSHMQ
QAIRRGTGLMEDDEEPIVEDVMMSSEDRLEDLNEGMDFDTMDIDLPASKNRRERTELKPD
YFDPASIMDDSVLNVSMF
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgatagaggcacaggagctccaatcagattatcacttccctcaggaggccgatactcag
ttatcttcagacacagattttgaggatccagagggctacaatgcaaaactcggaaaagca
aagggtgttaaacaggggaggaagggagctggtgagaagggcaaaggttcaggaggcaaa
agtggtgggcagaaccgcgtcaatggccaccaccatgagaatggcatggaaaacctgagc
ctgtttgagatggttaaaatgggcaagagtgccatgcagtctgtggtagatgactggatt
gagtcatacaagaatgaaagagacactgcattactggagcttatcaacttcttcatccag
tgctcaggctgcaaaggtgctgtgagctcggaaatgttcagacatatgcagaactcagag
atcatccgaaagatgacggaggagtttgatgaggacagcggagattatccgttgactatg
tcagggccactgtggaagaagtttaagtcaaatttctgtgagttcatcggggtgctggtg
cgacagtgtcagtacagcaccatctatgatgagtacatgatggacacggtcatctcgttg
ctcaccggcctgtctgactcccaggtccgagccttcaggcacaccagcacgctcgcagca
atgaagctgatgaccgctttagttaatgtagctctgaacctcagcatcaacatggacaac
actcagagacagtacgaggcggagcggaacaaagccatcgcaaagcgatctggggaacga
gtggagttattgttccaaaaacgcaaagagcttcaggaaaatcaagatgaaattgaaaat
atgatgaatgctatcttcaaaggtgtcttcatacaccgttatcgtgatgcaatagcagag
attagagccatttgtatcgaggagattggtgtttggatgaagatgtacagtgatgcgttt
ctgaatgacagctacctgaaatacgttggttggacgttacatgataagcaaggcgaggtg
cgtctgaagtgtctggcggccctgcagggtttgtattataaccgggaactcaacagtcgc
ctggagctcttcactagtcgcttcaaggatcgcattgtgtccatgaccttggataaggag
tatgatgtggctgtacaagctgtcaaactcttgaccctagtcttacagagtagtgatgag
atcctgacctctgaagactgggagagcgtctatcacctggtgtactctgcccatcgaccg
ctggccgtggcagcaggggagttcctctacaagaagttgttcagcaatcgcagtaccgag
gaggagggcatgctccgaaggggaagacagagtcgcaatgcaaatctaatcaagactaca
gttttcttcttcctggagagtgagctccatgagcacggggcttacctggtggatagtctg
tgggactgtgcgtcagacctgctgaaggactgggagagcatgatcagcctgctgctggac
gagcctttcccaggagaggaagagctgaccgaccgacaggagacggctctagttgagatc
atgctgtgtgccgttcgccagtcctgtgagtgccaccctcctgtgggcagaggaactggc
aagagggttctcacagccaaagaaaaaaaatctcagctggacgatcggacgagaatcaca
gagatgtttgctgtcgcgctcccattgttactagcaaagtacgcggtcgatgcagcaaag
ttaactaacctgctgcagctgccccagtactttgacctggagatcttcaccactggcagg
ctggagaagcacttggagtcgctgctccgtcagatccgtgaggtggtggagaaacacacg
gagacggatgtgctggaggcctgttccagaaccttccatgccctctctaatgaagagtac
accatcttcaaccgtgtggacatcgcacggagtcagctcctggacgagcaggtcgacaag
ctcaacagtttgctggaggattatttacaggagggagaggagaacgatgaggatgatgca
tatcaggtcttgtctacactgaaaagaatcacagccttccataacgctcatgacctctcc
aggtgggacctcttcaccaacctctacagactcctcaacacaggcctgcaaaacggggac
atgccacaacagattgtgatcaatgccttgcagtgcacacacttttccattctgtggcaa
ctagccaaggtttccaaaggcactgcaaaacagagtgacatggtgaacctgagaaagcag
atgagagcgttctgtctaatgtgccagaggtacctcaccagtgtcaacacttctgtcaaa
gagcaggccttcaccatcctgtgcgacgtgctgatggtgttcagccaccagatcgtgtcg
tccggccgcgaggccctggagccgctcatctacagcccagactcctccctgcaggccgag
gtgctcagcttcatccaggaccacgtcttcgtttaccaggatgaagagatcaacacagat
gatcagcgatatgatgaggtatggaaaattgaagctcttcacaaaagaaggaaccttctg
gctgcatactgcaaactcatcatttataacgtggtggagatgagcatgggagccgacatc
ttcaaacagtacatgaggtactacaacgactacggtgatatcatcaaagagaccatgagc
agaaccagacagatcgacaagatccagtgtgccaaaactctaatcctcagtctccagcag
ctctttaacgagatgctgacggagtttggctgtatcgtcgaccgctcctctgctgcgttc
tgcggcattaaggagctcgcccggcgcttctcgctcacctttggactcgatcaggtcaag
accagggacgccatcgccatgctccacaaggatggtattgagtttgccttcaaagagccc
agtccacagggagaggggaaccctcccctacacctgactttcctcgacatcctcagtgaa
ttctcctccaaactgttgcgccaagacaagaagactgtgcacctgtacctggagcgcttc
atgacgttccagatggcgctgcagagggaggactgctggatgccactcatctcctacagg
aactcgctgcaggcgggcgcggacgacgacaccatgtcggtcatcagcggcatcagcagc
cgcagctccacccgcagcaggaagagcaaagccccctcagtcagcagcaagaggaaacta
ccagaagcagatgagggcagctgcagcagcaccgacgccgccatgtggttgaaccgcgag
cagggcgcccagaccccggtcatgatgccgttgccgcacctcacctccacggtgctgcgc
gagcccaagaagctgcggcaggaggaggcctacgtgtacgccatggccaacgagcaccag
caccagcaccagcagcagcaccagcagcaagcccccctgaccccacagagccagccccag
cccaccatggactacaacacccaggtcacatggatgatggcccagaggcagcaggctgag
gccagacaacagcacgagagagccagcatgcactatgccaagatgaggagtcacatgcaa
caggccattcgacgtggaactggcttaatggaagatgacgaggagcccatagtggaagat
gtgatgatgtcctcagaggatcgactagaagacttaaatgaggggatggattttgacact
atggatattgacctgcctgcttccaaaaatcgtagagagaggacagaactcaaacccgac
tactttgatccagcctccatcatggatgactcagtcctcaacgtctccatgttttaa
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