Clupea harengus (Atlantic herring): 105896516
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Entry
105896516 CDS
T09045
Symbol
setdb2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00310
Lysine degradation
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
105896516 (setdb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105896516 (setdb2)
Enzymes [BR:
char01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
105896516 (setdb2)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
105896516 (setdb2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
105896516 (setdb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
Pre-SET
MBD
Motif
Other DBs
NCBI-GeneID:
105896516
NCBI-ProteinID:
XP_031414590
Ensembl:
ENSCHAG00000002497
UniProt:
A0A6P8EUM6
LinkDB
All DBs
Position
21:359228..382688
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AA seq
629 aa
AA seq
DB search
MGEGEIALLKIEKAKAFWRNVDVDNVFEMLLQYLVHLRELIKGNTASDKEYVQGMNVLQD
LEMKDKLNMKHYAIEEVVIGEELLTKSDLGCSQLTFKESRQLEDILPEQNISYDDSRELE
PVVLDHRDPLTPLSPHQDMFDLVLLSPSPYNIENALGHFCSSQSMFEPHDCSPACLAVLP
PHPDHFLGQNPLRAPLLCQFRRQCSSKTQFSTADDVAITTQITEEENEDVFYKTPCGREL
HTFEEVMHYLRQTEAFGVLQPWNFSFHPLVQPELPPMMTTLSRRDMSRGIESVAVQLCNE
VDSAQPTEFRYRRERWPHGCFLSAGELFSACCDCTDGCSDSRSCACLQLARKAAGGPVQF
YTHQRLQQPAPTGLYECSPWCGCDPYHCLNRVVQHGVRVRLQVFRRCDQGWGVRCRDDLD
VGTFVCTYAGVVLRTEQNSEESPVVKCAREEAVSDDEVEVVEEWTLPMTGSSATTTDPCS
PSHIPVIQRPTDHTLPATDGDEDSVRREDQERILSVGKVAPVTVAVRGEEKTGIEEEPQL
KEKDSRKRTGTQEEVWRSSNTKQNYYLDATKEGNVGRFIKHSCSPNLFVQNVFIDTHDPQ
FPVMAFFTSRTVKAGTELTWNYSHDVSSD
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagggggaaatagcattacttaaaatcgagaaagcgaaagccttttggagaaat
gtggacgtggacaatgtgtttgagatgttactgcaatacctggtacaccttagagagtta
atcaaggggaacactgcatcagacaaagaatatgtccagggcatgaatgtacttcaagac
ctcgaaatgaaggataaattgaacatgaaacattatgcaattgaggaagttgtcatcggc
gaagaattattaacaaagtctgatttgggctgttcacaactgacgttcaaggaatcaagg
cagttggaggatatacttcctgaacagaatataagttatgatgacagccgagagttggag
cctgttgtcctggaccacagagaccctcttaccccactgtcaccccatcaagacatgttt
gacctggtgctcctctcaccttcaccatacaacatagagaatgccctgggtcatttttgt
tcctcacaatccatgtttgagccccacgactgcagccctgcctgcctggctgtcttaccc
ccccaccctgaccacttcctgggccagaacccgctcagagcacccctgttgtgtcagttc
cgacgccaatgctctagcaagacccagttttctaccgcagatgatgttgccattaccaca
caaatcactgaggaggagaatgaggatgtgttttacaagacaccgtgtgggcgtgaactg
cacacttttgaggaggtgatgcattatctacggcagactgaggcatttggggtgcttcag
ccatggaacttcagctttcatccactggtgcagccagaactcccccccatgatgaccact
ctcagcaggagggacatgagtcgggggattgagtctgttgcagtgcagctgtgcaatgag
gtggattcagctcagcctacagagttccggtaccggagagagcgctggccacatggttgc
ttccttagtgctggagaactcttctctgcctgttgcgattgcactgatggttgctcagac
agtcgctcctgcgcatgtctgcagctcgctcggaaggctgcagggggtccagtgcagttc
tacactcaccagaggctgcaacaacctgcgcccacagggctctatgagtgcagtccgtgg
tgtgggtgtgatccgtatcactgtctgaaccgtgtggtccagcatggtgtacgcgttcgt
ctgcaggtgtttcgcagatgtgaccagggctggggagttcgttgtcgtgacgaccttgat
gtcgggaccttcgtttgcacatatgcaggtgtggttctaagaacagagcagaactcagag
gagtcccctgtggtaaagtgtgctcgggaggaggccgtctcagatgatgaggtggaggtg
gttgaagagtggactcttccaatgacaggatcgtctgcaacgacaacagatccttgttct
ccgtcccacattcctgtcattcagagacccacagaccacacacttccagcaacagatgga
gatgaagactctgtcaggagagaggatcaagagagaatcctgtcagttggaaaagtagct
ccggtgacggtggcggtgaggggtgaagagaagacggggatagaggaggaaccccagctg
aaggagaaagactcccgaaagaggacaggcactcaagaggaggtctggagatccagtaac
acaaagcagaattattaccttgatgccacaaaagagggaaatgtcggccggttcatcaag
cacagttgtagccccaacctgtttgtacagaatgtcttcatcgacacccatgacccccag
tttcccgtcatggctttcttcacaagcaggacagtgaaggcaggaaccgagctgacctgg
aactactcccacgacgtcagtagtgactga
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