Clupea harengus (Atlantic herring): 105896773
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Entry
105896773 CDS
T09045
Symbol
nkx1.2lb
Name
(RefSeq) NK1 transcription factor-related protein 1
KO
K09309
homeobox protein Nkx-1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105896773 (nkx1.2lb)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
105896773 (nkx1.2lb)
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Motif
Other DBs
NCBI-GeneID:
105896773
NCBI-ProteinID:
XP_012679029
Ensembl:
ENSCHAG00000012264
UniProt:
A0A6P3VSE0
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Position
20:complement(636162..639943)
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AA seq
420 aa
AA seq
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MYSSSLKHTHASRVSLLCTAQDSGEAGLFFSSLEIMNRDKTTPVGDTAIAPLASGGALVT
QAAVIVSVSPASMDNNNNSPKRVSANDLDREVLLHHGGTGDGSLLRQDPAAPAVAPTTGH
RTTAFSVLDILDPNKFTSKKQPRTAIDFTLGTENRGDEDSSRGSDQKTSYTADYDTCKKS
SLSKDGYVYRSEECEHDFIQANHTDSEIQDELCSDESNSAHMGNADGGLDSHDNAREQTP
SPAGAQTQQSSSNGQNNQVKAKRKRSGSDSKSGKPRRARTAFTYEQLVALENKFKSTRYL
SVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTSAPTGGGGGTNGQGHGLGGLS
PLSPSPPMGGHLSMHSYPGHAPGGLVCTAQLPFLQSHAVLSPFMLSSQAYGAPTFYTSHL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtattcaagtagcctaaaacacacacacgcgagtagggtatcgttgctgtgcacggcg
caggacagtggggaagcgggtttgtttttttcttcactagaaattatgaacagagacaag
acgactccggttggagatacagcgatcgctccactcgcgtccggcggcgccttggtcaca
caggcagcggttatcgtgtcggtttctccggcgagcatggacaacaacaacaacagcccg
aagcgagtctctgcaaacgatctcgacagagaggtgctgctacaccacggcgggacagga
gacggttcactgctgcgacaggatcccgccgctccagccgtagcgccgacaacgggccac
cggaccactgcgttttcagttctggacattttggacccgaacaagttcacaagtaaaaaa
caaccaagaacagccatcgacttcactttagggacggagaaccgaggcgacgaggactcg
tcccgtggatccgaccagaaaacatcatacacggcagactatgatacttgtaaaaaatca
tcattatcaaaagatggctacgtgtacagatccgaagagtgtgaacacgacttcatccag
gcgaaccacacggacagtgagatccaggacgagctgtgtagcgacgagagcaacagcgcg
cacatgggcaacgcggacggaggattagattcccatgacaacgcgagagaacaaactcca
agtcctgctggcgcacaaactcagcagtcgtcttcaaacggtcagaacaaccaggtaaaa
gcgaagagaaagcgctccggctcggactccaagtcgggcaagccccggagggctcgtacg
gcatttacctacgaacaacttgttgctctcgagaacaaattcaagtctaccaggtacctc
tccgtctgtgaacggctcaatttggcgttgtcgctcagcttgacagagacgcaggtgaaa
atctggtttcagaaccggcgtaccaagtggaaaaaacagaatcccggggcagatacgagt
gcaccaacgggcggtggcggtggcacgaacggccaaggccacggactgggggggctaagc
cccctgagtccttccccccccatgggcggccatctgtccatgcacagctacccagggcat
gcgccagggggactcgtctgtaccgctcaattaccgtttctgcagagtcacgcggtactc
tcacctttcatgttgagttcgcaagcatacggagctcccacgttttacacttcgcacttg
tga
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