Clupea harengus (Atlantic herring): 105899325
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Entry
105899325 CDS
T09045
Symbol
usp36
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 36
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
105899325 (usp36)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105899325 (usp36)
Enzymes [BR:
char01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
105899325 (usp36)
Peptidases and inhibitors [BR:
char01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
105899325 (usp36)
Ubiquitin system [BR:
char04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
105899325 (usp36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
105899325
NCBI-ProteinID:
XP_031429318
UniProt:
A0A6P8FM55
LinkDB
All DBs
Position
1:25882641..25896717
Genome browser
AA seq
1114 aa
AA seq
DB search
MPIVDKLKEALKPGRKDSNDEGDLNKLLASSAKKVLLQKIEFEPASKGFSYQLEALKSKY
VILNPRSDHATPQRFPESGQIKRQGGDGGGQGDGIPAPQKHLFPGNRLSLRWERVYRVGA
GLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHSRSCHQSGFCMICIMQNHLIQAFANTG
NAIKPVSFIRDIKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYPKLDRQTQATTLVH
QIFGGYLRSRVKCSICKSVSDTYDPYLDIAVEIRQAANIVRALELFVKPDVLSGENAYMC
AKCKKKVPATKRFTVHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSTGDP
VMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSMVHASNIKVVLNQQAYVLFYLR
IPESRKNADGPKQCIGQSGKTSVTPDLKKNLNAPLSSPQISKKFDAAHLRKIQSVDSGLG
VSIARSTCNLHSPKLTNGSASNSTTASQAPPRGPVLIEEPFKKLKKPLPQPRPISQTTNG
VAKAESERRGDRSLAQSTSLKSLSDSDTSESKDSVGTRSAPVGVAGAMNGTASPSPSKSA
DRLKPPALSSLTSLHSTMSPPPAKRLALSAKKEASHSRSLNTESPPTSSSHLSFDSAHPT
KLTQLHAHTSGPTNQQHRFSPSYSLLNSSPLPPKPSIHCPSQKPSQSDTHTLSPSKLQSL
PAALPVSPLLKKKKKKNKKKALKRRHSETNEPITEPAETHKPIGTSPEMQEEGPLAEKKR
KKKKAKRKKMEGKGEGQLRQRPSAKAPLQEEDWRLGDSWRLTTATHTPTARTSPSSQPKA
QHTDTPTPDTHTQCTTHTLEQSEKQRRRKKKKKKMAATLDGAPDGAQEKADCPTSYGPQR
VKPNAVGGEPDTVDSDELKQKRKKRKRKLEEESPREEESQPKEVEKALGSDDSALTKRDQ
KTTNPPAIALVLAAPVVVWDSKVQDGYKRNQAPAAKEEESGSGPKGCWDGRRSGGVVEEL
LKNSSDTAYGAPVLSWGGEDSVISKDAIEDAQFAKNSTVIDEWDEDFDSGKVKKIKKYKK
EKRKRGNAFQKIQDHRSMWSVTPGGKRSRLGFRQ
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgcccatagtggataaacttaaagaggccctgaagccgggccgcaaggactccaatgat
gaaggcgacctcaacaagctgctggcctcctctgccaagaaggtccttctgcagaagatc
gagtttgaacctgccagcaagggcttcagctaccagctcgaggcactgaagagcaaatat
gtcatcttgaatccacgcagtgaccacgccacgccacagaggtttccagaaagcggccag
atcaagcgtcagggtggagacggtggcgggcagggcgatggtattccggccccccagaaa
catctgttccctggcaaccgtctgtctctgcgctgggagcgggtgtatcgggtgggggca
gggctccataacctaggaaacacatgcttcctgaactccacggtgcagtgtctgacatac
acgcctccccttgccaactacctgctttccaaggagcacagtcgatcatgtcaccagtca
ggcttctgtatgatctgtatcatgcagaatcatctcatccaggccttcgctaacacgggc
aacgccatcaaacctgtctccttcatcagggacatcaaaaagattgcccggcattttcgc
tttggaagtcaggaagatgcccatgaattcctgcgctacaccattgatgccatgcagaag
gcctgtctgaatggctacccaaagttggatagacagactcaggccaccaccctggtccat
cagatttttgggggttacctcaggtctcgagtgaagtgttctatttgcaaaagtgtgtca
gacacttatgacccatacctggacattgctgttgagatccgacaagcggcaaacattgtg
cgagctctggagctgtttgtgaaaccggatgttttaagtggggagaacgcctacatgtgt
gccaaatgtaagaagaaagttccagcaacaaagcgcttcactgtccaccggacatccaat
gtcctgacgctgtcactgaagaggttcgccaacttcagtggagggaagatcaccaaggat
gttggttacccagagttcttgaacatcaggccgtacatgtcccagagcacaggggaccca
gtaatgtacggcctctatgctgtcctagtgcattctgggtatagctgccatgcagggcat
tattactgttatgtgaaggccagtaatgggcagtggtatcagatgaatgactcgatggtt
catgccagcaacatcaaggttgtcctgaaccagcaagcttatgttctcttctatctaagg
attccagagagcagaaagaatgctgatgggcccaagcaatgcataggacagtctgggaag
accagcgtcaccccggatctgaagaagaatcttaatgccccactatcttcaccgcagatc
tccaagaagtttgacgccgctcacctgaggaagatccagtctgtggatagcggtctcggg
gtgagcatcgccaggagcacctgcaaccttcactcgcccaaactgaccaacggctctgcc
tccaattccaccactgcatcgcaagccccgcccagaggacctgtcctaatagaggagccc
tttaagaagctgaagaagcccctcccacagccccgccccatcagtcagacgaccaacggt
gtggcaaaagctgagagcgagaggcggggtgaccgaagcctagcccagtctacctcactc
aagtccctctctgattctgacacctcagagtctaaggactcggttggcacgcgcagcgcc
cctgtcggagtagcgggggccatgaacggcacggcgtccccgtccccttccaagagcgcc
gaccggctgaagccccctgccctcagcagcctgacctcgctccacagcaccatgagcccg
ccgcccgccaagcgcctcgccctctccgccaagaaggaagccagtcacagccggagtctg
aacactgagtccccgcccacgtcatcatctcatctctcctttgactccgcccatcccact
aagctcactcaacttcatgcacacacgtctggccccaccaaccaacagcacaggttttct
ccctcttactcacttctaaattcttcaccgctccccccaaagccctccatacactgccca
tctcagaaaccctctcagtctgacacacacacactcagcccctctaagctccagtcactg
ccggcagccctgcccgtcagccccctcctcaagaagaagaagaaaaagaataagaagaag
gcgctcaagcgccgccactcagagactaatgagccaatcacagagccggcggagacacac
aagccaattggcacgtccccggagatgcaagaggagggccctttggctgaaaagaagcgc
aagaagaaaaaagcaaagaggaaaaagatggaggggaagggagaggggcagctgcggcag
cggcctagtgcgaaggctccactgcaggaggaggactggaggctgggagacagctggagg
ctcacgacggctacacacacacccacagcgcgcacatcaccctcctcacagccaaaagca
cagcacacagacacacccacccctgacacacacacgcagtgcaccacccacactctggag
cagtcggagaagcagaggaggaggaagaagaagaaaaagaagatggcggcaacgctggat
ggagcaccggatggagcacaggagaaagcagactgccccacatcctacggcccccaaagg
gtaaagccgaacgctgttggaggggaaccagacactgtagactcggatgagttgaagcaa
aaacgcaagaagaggaaacgaaagcttgaggaggagagtccgagagaggaggagagtcag
ccaaaggaggtggagaaagccctgggctcggacgacagcgctctcaccaaacgagaccag
aagacaaccaatcctcctgccatagctcttgttttagccgctcctgtggtggtgtgggac
agtaaagttcaggatggctacaagcgcaaccaggctcctgctgcgaaagaggaggagtct
ggcagtggccccaaaggatgctgggatggtaggcggagtggaggggtagtggaggagctg
ctgaagaactccagtgacacggcctatggagcaccagtccttagttggggcggagaagac
tccgtaatcagtaaagatgccatcgaagatgcccagtttgccaagaattccacagtgatc
gatgagtgggatgaggactttgacagtgggaaggtgaagaaaatcaagaagtacaaaaag
gagaagaggaaacgagggaatgcgtttcagaagatccaggaccatcgtagtatgtggtct
gtcacccctggagggaagcggagcagactggggttccgccagtga
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